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Included Properties

Data Type
  • ExperimentSetReplicate2
  • Experiment Set2
    • Organ/System
  • digestive system2
  • large intestine2
    • Treatments
  • Chemical1
  • No value1
    • Set Type
  • Replicate2
    • Dataset Group
  • Hi-C on HCT116 +/- WAPL2
    • 18 Common Properties
     Project
    4DN
     Lab
    Jennifer Cremins, UPENN
     Experiment Category
    Sequencing
     Experiment Type
    Hi-C
     Dataset
    Hi-C on HCT116
     Organism
    Human
     Sample Type
    immortalized cells
     Sample Tier
    Unclassified
     Sample Category
    Tier 2
     Sample
    HCT116 with Crispr generated mClover and AID-tagged WAPL, AAVS1-OsTIR1(F74G)
     Tissue Source
    colon
     Publication
    Emerson DJ et al. (2022) PMID:35676475
     Modifications
    No value
     Assay Details
    Enzyme: Arima - A1, A2
     Center
    Phillips-Cremins
     Status
    Released
     Commendations
    No value
     Warnings
    Biosample Metadata Incomplete
    Title
    Experiment Type
    Biosample
    Dataset
    Condition
    Assay Details
    Lab
    4DNES1JP4KZ1
    in situ Hi-C
    HCT116 with Crispr generated mClover and AID-tagged WAPL, AAVS1-OsTIR1(F74G)
    Hi-C on HCT116
    WAPL KD
    Enzyme
    Arima - A1, A2
    Jennifer Cremins, UPENN
    4DNESNSTBMBY
    in situ Hi-C
    HCT116 with Crispr generated mClover and AID-tagged WAPL, AAVS1-OsTIR1(F74G)
    Hi-C on HCT116
    wild-type
    Enzyme
    Arima - A1, A2
    Jennifer Cremins, UPENN
    - fin -