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Included Properties

Data Type
  • ExperimentSetReplicate7
  • Experiment Set7
    • Sample
  • Treg - thymus - Foxp3-Thy1.1 WT4
  • "wannabe" Treg - thymus - Foxp3-KO1
  • Treg - thymus - Fox3p-GFP+1
  • Treg - thymus - Foxp3-Thy1.1 DSM1
    • Organ/System
  • endocrine system7
  • endoderm7
  • immune system7
  • mesoderm7
  • thymus7
    • Modifications
  • No value6
  • Crispr1
    • Treatments
    Set Type
  • Replicate7
    • Dataset Group
  • Hi-C on Maturing Regulatory T-cells with Fox3p disruption7
    • 16 Common Properties
     Project
    4DN
     Lab
    Jesse Dixon, SALK
     Experiment Category
    Sequencing
     Experiment Type
    Hi-C
     Dataset
    in situ Hi-C on maturing regulatory T cells (Treg)
     Organism
    Mouse
     Sample Type
    primary cells
     Sample Tier
    Unclassified
     Sample Category
    Primary Cells
     Tissue Source
    thymus
     Publication
    Liu Z et al. (2023) PMID:37932264
     Assay Details
    Enzyme: MboI
     Center
    OFHHD - Dixon
     Status
    Released
     Commendations
    No value
     Warnings
    No value
    Title
    Experiment Type
    Biosample
    Dataset
    Condition
    Assay Details
    Lab
    4DNESKIGI9SP
    in situ Hi-C
    Treg - thymus - Foxp3-Thy1.1 WT
    in situ Hi-C on maturing regulatory T cells (Treg)
    Treg - Crispr Ikzf2 enhancer deletion
    Enzyme
    MboI
    Jesse Dixon, SALK
    4DNESHQUSH4D
    in situ Hi-C
    Treg - thymus - Foxp3-Thy1.1 WT
    in situ Hi-C on maturing regulatory T cells (Treg)
    Treg - Crispr Foxp3 deletion
    Enzyme
    MboI
    Jesse Dixon, SALK
    4DNES4ZVGG33
    in situ Hi-C
    Treg - thymus - Foxp3-Thy1.1 WT
    in situ Hi-C on maturing regulatory T cells (Treg)
    Treg - Crispr control
    Enzyme
    MboI
    Jesse Dixon, SALK
    4DNESKJCPL3Y
    in situ Hi-C
    Treg - thymus - Fox3p-GFP+
    in situ Hi-C on maturing regulatory T cells (Treg)
    Treg - Foxp3 KIKO - control
    Enzyme
    MboI
    Jesse Dixon, SALK
    4DNESY8KOX6F
    in situ Hi-C
    "wannabe" Treg - thymus - Foxp3-KO
    in situ Hi-C on maturing regulatory T cells (Treg)
    Treg - Foxp3 KIKO - Foxp3 knockout
    Enzyme
    MboI
    Jesse Dixon, SALK
    4DNES2H8V8YZ
    in situ Hi-C
    Treg - thymus - Foxp3-Thy1.1 WT
    in situ Hi-C on maturing regulatory T cells (Treg)
    Treg DSM - WT control
    Enzyme
    MboI
    Jesse Dixon, SALK
    4DNESIGSQNXW
    in situ Hi-C
    Treg - thymus - Foxp3-Thy1.1 DSM
    in situ Hi-C on maturing regulatory T cells (Treg)
    Treg DSM - Foxp3 domain swap
    Enzyme
    MboI
    Jesse Dixon, SALK
    - fin -