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Included Properties

Data Type
  • ExperimentSetReplicate1
  • Experiment Set1
    • Dataset
  • Hi-C on DP2 cells isolated from CRE induced TCF1-KO mice0
  • Immunofluorescence on synchronyzed HeLa cells135
  • No value100
  • DNA FISH on Chr1771
  • DNA FISH on Chr470
  • Hi-C on RAD21-AID tagged HCT-11658
  • RNA-seq on monocytes from b-ALL patient53
  • DNA FISH on Chr152
  • SPT on U2OS cells for Spot-On analysis45
  • ATAC-seq on monocytes from b-ALL patient44
    • View 91 More1308
    Organ/System
    Set Type
  • Replicate1
    • 18 Common Properties
     Project
    4DN
     Lab
    Golnaz Vahedi, UPENN
     Experiment Category
    Sequencing
     Experiment Type
    Hi-C
     Organism
    Mouse
     Sample Type
    primary cells
     Sample Tier
    Unclassified
     Sample Category
    Primary Cells
     Sample
    double-positive, alpha-beta thymocyte
     Tissue Source
    thymus
     Publication
    Wang W et al. (2022) PMID:35726060
     Modifications
    No value
     Treatments
    No value
     Assay Details
    Enzyme: Arima - A1, A2
     Center
    OFHHD - Phillips-Cremins
     Status
    Released
     Commendations
    No value
     Warnings
    Replicate Numbers
    Title
    Experiment Type
    Biosample
    Dataset
    Condition
    Assay Details
    Lab
    4DNES4HVMY8W
    in situ Hi-C
    double-positive, alpha-beta thymocyte
    Hi-C on DP2 cells isolated from CRE induced TCF1-KO mice
    Cre+ induced mice-Knockout tcf7
    Enzyme
    Arima - A1, A2
    Golnaz Vahedi, UPENN
    - fin -