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Included Properties

Data Type
  • ExperimentSetReplicate6
  • Experiment Set6
    • Dataset
  • Hi-C on ES-E14 +/- Mll3-Mll40
  • Immunofluorescence on synchronyzed HeLa cells135
  • No value100
  • DNA FISH on Chr1771
  • DNA FISH on Chr470
  • Hi-C on RAD21-AID tagged HCT-11658
  • RNA-seq on monocytes from b-ALL patient53
  • DNA FISH on Chr152
  • SPT on U2OS cells for Spot-On analysis45
  • ATAC-seq on monocytes from b-ALL patient44
    • View 91 More1308
    Sample
  • ES-E143
  • ES-E14 with Flo/Flox deletion of Mll3 and Mll4 genes3
    • Set Type
  • Replicate6
    • Warnings
    17 Common Properties
     Project
    4DN
     Lab
    Bing Ren, UCSD
     Experiment Category
    Sequencing
     Experiment Type
    Hi-C
     Organism
    Mouse
     Sample Type
    stem cells
     Sample Tier
    Unclassified
     Sample Category
    Mouse stem cell
     Organ/System
    No value
     Tissue Source
    stem cell
     Publication
    Yan J et al. (2018) PMID:29313530
     Modifications
    No value
     Treatments
    No value
     Assay Details
    Enzyme: MboI
     Center
    NOFIC - Ren
     Status
    Released
     Commendations
    No value
    Title
    Experiment Type
    Biosample
    Dataset
    Condition
    Assay Details
    Lab
    4DNES7L8Z2KV
    in situ Hi-C
    ES-E14 with Flo/Flox deletion of Mll3 and Mll4 genes
    Hi-C on ES-E14 +/- Mll3-Mll4
    Mll3-Mll4 DKO, Neural progenitor differentiation (60h)
    Enzyme
    MboI
    Bing Ren, UCSD
    4DNES49TDMJM
    in situ Hi-C
    ES-E14 with Flo/Flox deletion of Mll3 and Mll4 genes
    Hi-C on ES-E14 +/- Mll3-Mll4
    Mll3-Mll4 DKO, Neural progenitor differentiation (36h)
    Enzyme
    MboI
    Bing Ren, UCSD
    4DNESWEF2AHT
    in situ Hi-C
    ES-E14 with Flo/Flox deletion of Mll3 and Mll4 genes
    Hi-C on ES-E14 +/- Mll3-Mll4
    Mll3-Mll4 DKO
    Enzyme
    MboI
    Bing Ren, UCSD
    4DNESHGZUBL9
    in situ Hi-C
    ES-E14
    Hi-C on ES-E14 +/- Mll3-Mll4
    WT, Neural progenitor differentiation (60h)
    Enzyme
    MboI
    Bing Ren, UCSD
    4DNES5R3O24W
    in situ Hi-C
    ES-E14
    Hi-C on ES-E14 +/- Mll3-Mll4
    WT, Neural progenitor differentiation (36h)
    Enzyme
    MboI
    Bing Ren, UCSD
    4DNESU4BQU4G
    in situ Hi-C
    ES-E14
    Hi-C on ES-E14 +/- Mll3-Mll4
    WT
    Enzyme
    MboI
    Bing Ren, UCSD
    - fin -