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Included Properties

Data Type
  • ExperimentSetReplicate4
  • Experiment Set4
    • Dataset
  • Hi-C on H1 cells0
  • Immunofluorescence on synchronyzed HeLa cells135
  • No value100
  • DNA FISH on Chr1771
  • DNA FISH on Chr470
  • Hi-C on RAD21-AID tagged HCT-11658
  • RNA-seq on monocytes from b-ALL patient53
  • DNA FISH on Chr152
  • SPT on U2OS cells for Spot-On analysis45
  • ATAC-seq on monocytes from b-ALL patient44
    • View 91 More1308
    Sample Category
  • H1-hESC4
  • Human stem cell4
    • Treatments
    Set Type
  • Replicate4
    • Warnings
    16 Common Properties
     Project
    4DN
     Lab
    Sheng Zhong, UCSD
     Experiment Category
    Sequencing
     Experiment Type
    Hi-C
     Organism
    Human
     Sample Type
    stem cells
     Sample Tier
    Tier 1
     Sample
    H1-hESC (Tier 1)
     Organ/System
    No value
     Tissue Source
    stem cell
     Publication
    Calandrelli R et al. (2023) PMID:37845234
     Modifications
    No value
     Assay Details
    Enzyme: Arima - A1, A2
     Center
    OH - Zhong
     Status
    Released
     Commendations
    No value
    Title
    Experiment Type
    Biosample
    Dataset
    Condition
    Assay Details
    Lab
    4DNES4AABNEZ
    in situ Hi-C
    H1-hESC (Tier 1)
    Hi-C on H1 cells
    RNaseA
    Enzyme
    Arima - A1, A2
    Sheng Zhong, UCSD
    4DNES65I3RQG
    in situ Hi-C
    H1-hESC (Tier 1)
    Hi-C on H1 cells
    Flavopiridol
    Enzyme
    Arima - A1, A2
    Sheng Zhong, UCSD
    4DNES2253IBO
    in situ Hi-C
    H1-hESC (Tier 1)
    Hi-C on H1 cells
    Ammonium acetate
    Enzyme
    Arima - A1, A2
    Sheng Zhong, UCSD
    4DNESFSCP5L8
    in situ Hi-C
    H1-hESC (Tier 1)
    Hi-C on H1 cells
    No treatment control
    Enzyme
    Arima - A1, A2
    Sheng Zhong, UCSD
    - fin -