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Included Properties

Data Type
  • ExperimentSetReplicate3
  • Experiment Set3
    • Dataset
  • Hi-C on lamin A/C haploinsufficient hiPSC-derived cardiomyocytes0
  • Immunofluorescence on synchronyzed HeLa cells135
  • No value100
  • DNA FISH on Chr1771
  • DNA FISH on Chr470
  • Hi-C on RAD21-AID tagged HCT-11658
  • RNA-seq on monocytes from b-ALL patient53
  • DNA FISH on Chr152
  • SPT on U2OS cells for Spot-On analysis45
  • ATAC-seq on monocytes from b-ALL patient44
    • View 91 More1308
    Sample
  • LMNA-R225X-het with LMNA-R225X corrected to wild-type by Crispr2
  • LMNA-R225X-het1
    • Organ/System
    Set Type
  • Replicate3
    • 17 Common Properties
     Project
    4DN
     Lab
    Chuck Murry, UW
     Experiment Category
    Sequencing
     Experiment Type
    Hi-C
     Organism
    Human
     Sample Type
    induced pluripotent stem cells
     Sample Tier
    Unclassified
     Sample Category
    Human stem cell
     Tissue Source
    cardiac muscle cell
     Publication
    Bertero A et al. (2019) PMID:31395619
     Modifications
    No value
     Treatments
    No value
     Assay Details
    Enzyme: DNaseI
     Center
    NOFIC - Shendure
     Status
    Released
     Commendations
    No value
     Warnings
    Biosample Metadata Incomplete
    Title
    Experiment Type
    Biosample
    Dataset
    Condition
    Assay Details
    Lab
    4DNESXNK2AP5
    DNase Hi-C
    LMNA-R225X-het with LMNA-R225X corrected to wild-type by Crispr
    Hi-C on lamin A/C haploinsufficient hiPSC-derived cardiomyocytes
    CRISPR corrected LMNA het R225X mutation to R225R - Clone 38
    Enzyme
    DNaseI
    Chuck Murry, UW
    4DNESFFI9FWZ
    DNase Hi-C
    LMNA-R225X-het with LMNA-R225X corrected to wild-type by Crispr
    Hi-C on lamin A/C haploinsufficient hiPSC-derived cardiomyocytes
    CRISPR corrected LMNA het R225X mutation to R225R - Clone 15
    Enzyme
    DNaseI
    Chuck Murry, UW
    4DNESTZWFM9F
    DNase Hi-C
    LMNA-R225X-het
    Hi-C on lamin A/C haploinsufficient hiPSC-derived cardiomyocytes
    Heterozygous LMNA nonsense mutation R225X
    Enzyme
    DNaseI
    Chuck Murry, UW
    - fin -