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Included Properties

Data Type
  • ExperimentSetReplicate2
  • Experiment Set2
    • Dataset
  • Hi-C on mouse stem cells0
  • Immunofluorescence on synchronyzed HeLa cells135
  • No value100
  • DNA FISH on Chr1771
  • DNA FISH on Chr470
  • Hi-C on RAD21-AID tagged HCT-11658
  • RNA-seq on monocytes from b-ALL patient53
  • DNA FISH on Chr152
  • SPT on U2OS cells for Spot-On analysis45
  • ATAC-seq on monocytes from b-ALL patient44
    • View 91 More1308
    Sample
  • extraembryonic cell1
  • trophoblast cell1
    • Set Type
  • Replicate2
    • 18 Common Properties
     Project
    4DN
     Lab
    Effie Apostolou, CORNELL
     Experiment Category
    Sequencing
     Experiment Type
    Hi-C
     Organism
    Mouse
     Sample Type
    stem cells
     Sample Tier
    Unclassified
     Sample Category
    Mouse stem cell
     Organ/System
    No value
     Tissue Source
    stem cell
     Publication
    Murphy D et al. (2023) doi:10.1101/2023.07.19.549714
     Modifications
    No value
     Treatments
    No value
     Assay Details
    Enzyme: Arima - A1, A2
     Center
    OFHHD - Huangfu
     Status
    Released
     Commendations
    No value
     Warnings
    Biosample Metadata Incomplete
    Title
    Experiment Type
    Biosample
    Dataset
    Condition
    Assay Details
    Lab
    4DNESCE6QH8A
    in situ Hi-C
    extraembryonic cell
    Hi-C on mouse stem cells
    Extra embryonic stem cells (XEN)
    Enzyme
    Arima - A1, A2
    Effie Apostolou, CORNELL
    4DNESXWY8ILZ
    in situ Hi-C
    trophoblast cell
    Hi-C on mouse stem cells
    Trophoblast stem cells (TSC)
    Enzyme
    Arima - A1, A2
    Effie Apostolou, CORNELL
    - fin -