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Included Properties

Data Type
  • ExperimentSetReplicate2
  • Experiment Set2
    • Dataset
  • HiC on K562 cells +/- Heat Shock0
  • Immunofluorescence on synchronyzed HeLa cells135
  • No value100
  • DNA FISH on Chr1771
  • DNA FISH on Chr470
  • Hi-C on RAD21-AID tagged HCT-11658
  • RNA-seq on monocytes from b-ALL patient53
  • DNA FISH on Chr152
  • SPT on U2OS cells for Spot-On analysis45
  • ATAC-seq on monocytes from b-ALL patient44
    • View 91 More1308
    Treatments
  • Heat Shock1
  • No value1
    • Set Type
  • Replicate2
    • 18 Common Properties
     Project
    4DN
     Lab
    John Lis, CORNELL
     Experiment Category
    Sequencing
     Experiment Type
    Hi-C
     Organism
    Human
     Sample Type
    immortalized cells
     Sample Tier
    Tier 2
     Sample Category
    Tier 2
     Sample
    K562 (Tier 2)
     Organ/System
    No value
     Tissue Source
    blood cell
     Publication
    Ray J et al. (2019) PMID:31506350
     Modifications
    No value
     Assay Details
    Enzyme: MboI
     Center
    NT - Lis
     Status
    Released
     Commendations
    No value
     Warnings
    Biosample Metadata Incomplete
    Title
    Experiment Type
    Biosample
    Dataset
    Condition
    Assay Details
    Lab
    4DNESU95RUNO
    in situ Hi-C
    K562 (Tier 2)
    HiC on K562 cells +/- Heat Shock
    Control
    Enzyme
    MboI
    John Lis, CORNELL
    4DNESPOC41XG
    in situ Hi-C
    K562 (Tier 2)
    HiC on K562 cells +/- Heat Shock
    Heat Shock
    Enzyme
    MboI
    John Lis, CORNELL
    - fin -