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Included Properties

Data Type
  • ExperimentSetReplicate4
  • Experiment Set4
    • Dataset
  • Micro-C on H1-DE cells - protocol variations0
  • Immunofluorescence on synchronyzed HeLa cells135
  • No value100
  • DNA FISH on Chr1771
  • DNA FISH on Chr470
  • Hi-C on RAD21-AID tagged HCT-11658
  • RNA-seq on monocytes from b-ALL patient53
  • DNA FISH on Chr152
  • SPT on U2OS cells for Spot-On analysis45
  • ATAC-seq on monocytes from b-ALL patient44
    • View 91 More1308
    Sample Tier
    Sample Category
    Sample
    Publication
    Set Type
  • Replicate4
    • Warnings
    14 Common Properties
     Project
    4DN
     Lab
    Job Dekker, UMMS
     Experiment Category
    Sequencing
     Experiment Type
    Hi-C
     Organism
    Human
     Sample Type
    in vitro differentiated cells
     Organ/System
    endoderm
     Tissue Source
    definitive endoderm
     Modifications
    No value
     Treatments
    No value
     Assay Details
    Enzyme: MNase
     Center
    NOFIC - Dekker
     Status
    Released
     Commendations
    No value
    Title
    Experiment Type
    Biosample
    Dataset
    Condition
    Assay Details
    Lab
    4DNESPPSOUKK
    Micro-C
    H1-hESC differentiated to definitive endoderm
    Micro-C on H1-DE cells - protocol variations
    Formaldehyde
    Enzyme
    MNase
    Job Dekker, UMMS
    4DNESN6KY4J7
    Micro-C
    H1-hESC differentiated to definitive endoderm
    Micro-C on H1-DE cells - protocol variations
    Formaldehyde+EGS
    Enzyme
    MNase
    Job Dekker, UMMS
    4DNESP4MARXG
    Micro-C
    H1-hESC differentiated to definitive endoderm
    Micro-C on H1-DE cells - protocol variations
    Formaldehyde+DSG
    Enzyme
    MNase
    Job Dekker, UMMS
    4DNESW1SPPTD
    Micro-C
    H1-hESC (Tier 1) differentiated to definitive endoderm
    Micro-C on H1-DE cells - protocol variations
    Formaldehyde+DSG, H1-DE (Tier 1)
    Enzyme
    MNase
    Job Dekker, UMMS
    - fin -