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3 fewer sets in 4DN-only Data.

Included Properties

Data Type
  • ExperimentSetReplicate3
  • Experiment Set3
    • Dataset
  • TCC on hepatocytes +/- NIPBL0
  • Immunofluorescence on synchronyzed HeLa cells135
  • No value100
  • DNA FISH on Chr1771
  • DNA FISH on Chr470
  • Hi-C on RAD21-AID tagged HCT-11658
  • RNA-seq on monocytes from b-ALL patient53
  • DNA FISH on Chr152
  • SPT on U2OS cells for Spot-On analysis45
  • ATAC-seq on monocytes from b-ALL patient44
    • View 91 More1308
    Organ/System
    Set Type
  • Replicate3
    • 18 Common Properties
     Project
    External
     Lab
    Francois Spitz, PASTEUR
     Experiment Category
    Sequencing
     Experiment Type
    Hi-C
     Organism
    Mouse
     Sample Type
    primary cells
     Sample Tier
    Unclassified
     Sample Category
    Primary Cells
     Sample
    hepatocyte
     Tissue Source
    liver
     Publication
    Schwarzer W et al. (2017) PMID:29094699
     Modifications
    No value
     Treatments
    Chemical
     Assay Details
    Enzyme: HindIII
     Center
    External
     Status
    Released
     Commendations
    No value
     Warnings
    No value
    Title
    Experiment Type
    Biosample
    Dataset
    Condition
    Assay Details
    Lab
    4DNESIZMF58U
    TCC
    hepatocyte
    TCC on hepatocytes +/- NIPBL
    NIPBL KO
    Enzyme
    HindIII
    Francois Spitz, PASTEUR
    4DNESLUJ3INP
    TCC
    hepatocyte
    TCC on hepatocytes +/- NIPBL
    TAM-treated control
    Enzyme
    HindIII
    Francois Spitz, PASTEUR
    4DNESAOU4AAQ
    TCC
    hepatocyte
    TCC on hepatocytes +/- NIPBL
    uninduced control
    Enzyme
    HindIII
    Francois Spitz, PASTEUR
    - fin -