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8 fewer sets in 4DN-only Data.

Included Properties

Data Type
  • ExperimentSetReplicate8
  • Experiment Set8
    • Dataset
  • in situ Hi-C on primary human cardiomyocytes8
  • Immunofluorescence on synchronyzed HeLa cells135
  • No value100
  • DNA FISH on Chr1771
  • DNA FISH on Chr470
  • Hi-C on RAD21-AID tagged HCT-11658
  • RNA-seq on monocytes from b-ALL patient53
  • DNA FISH on Chr152
  • SPT on U2OS cells for Spot-On analysis45
  • ATAC-seq on monocytes from b-ALL patient44
    • View 90 More1300
    Sample
  • heart left atrium4
  • heart left ventricle4
    • Organ/System
    Tissue Source
    Set Type
  • Replicate8
    • 16 Common Properties
     Project
    External
     Lab
    Wouter de Laat, HUBRECHT
     Experiment Category
    Sequencing
     Experiment Type
    Hi-C
     Organism
    Human
     Sample Type
    tissue
     Sample Tier
    Unclassified
     Sample Category
    Multicellular Tissue
     Publication
    Bianchi V et al. (2019) doi:10.1101/705715
     Modifications
    No value
     Treatments
    No value
     Assay Details
    Enzyme: DpnII
     Center
    External
     Status
    Released
     Commendations
    No value
     Warnings
    No value
    Title
    Experiment Type
    Biosample
    Dataset
    Condition
    Assay Details
    Lab
    4DNESZNSYMTQ
    in situ Hi-C
    heart left ventricle
    in situ Hi-C on primary human cardiomyocytes
    left ventricle - donor 01199
    Enzyme
    DpnII
    Wouter de Laat, HUBRECHT
    4DNESJ98FIW5
    in situ Hi-C
    heart left atrium
    in situ Hi-C on primary human cardiomyocytes
    left atrium - donor 01199
    Enzyme
    DpnII
    Wouter de Laat, HUBRECHT
    4DNES228B63X
    in situ Hi-C
    heart left ventricle
    in situ Hi-C on primary human cardiomyocytes
    left ventricle - donor 01176
    Enzyme
    DpnII
    Wouter de Laat, HUBRECHT
    4DNESINBA78I
    in situ Hi-C
    heart left atrium
    in situ Hi-C on primary human cardiomyocytes
    left atrium - donor 01176
    Enzyme
    DpnII
    Wouter de Laat, HUBRECHT
    4DNESW1HL87C
    in situ Hi-C
    heart left ventricle
    in situ Hi-C on primary human cardiomyocytes
    left ventricle - donor 01160
    Enzyme
    DpnII
    Wouter de Laat, HUBRECHT
    4DNESY4QMHAD
    in situ Hi-C
    heart left atrium
    in situ Hi-C on primary human cardiomyocytes
    left atrium - donor 01160
    Enzyme
    DpnII
    Wouter de Laat, HUBRECHT
    4DNESUYU9VSU
    in situ Hi-C
    heart left ventricle
    in situ Hi-C on primary human cardiomyocytes
    left ventricle - donor 01137
    Enzyme
    DpnII
    Wouter de Laat, HUBRECHT
    4DNESV6NHHCO
    in situ Hi-C
    heart left atrium
    in situ Hi-C on primary human cardiomyocytes
    left atrium - donor 01137
    Enzyme
    DpnII
    Wouter de Laat, HUBRECHT
    - fin -