Included Properties
Data Type
Sample Category
Organ/System
Modifications
Set Type
Dataset Group
17 Common Properties
Project
4DN
Lab
Benoit Bruneau, UCSF
Experiment Category
Sequencing
Experiment Type
Hi-C
Dataset
in situ Hi-C on an allelic series of iPSCs differentiated to cardiac cells
Organism
Human
Sample Type
in vitro differentiated cells
Sample Tier
Unclassified
Sample
WTC-11 differentiated to cardiac muscle cell
Tissue Source
cardiac muscle cell
Publication
Grant ZL et al. (2025) PMID:39829922
Treatments
No value
Assay Details
Enzyme: Arima - A1, A2
Center
Bruneau
Status
Released
Commendations
No value
Warnings
Biosample Metadata Incomplete
Title
Experiment Type
Biosample
Dataset
Condition
Assay Details
Lab
in situ Hi-C
WTC-11 differentiated to cardiac muscle cell
in situ Hi-C on an allelic series of iPSCs differentiated to cardiac cells
TBX5 homozygous (compound heterozygous) WTC-11-derived cardiac myocytes - differentiation day 23
Enzyme
Arima - A1, A2
in situ Hi-C
WTC-11 differentiated to cardiac muscle cell
in situ Hi-C on an allelic series of iPSCs differentiated to cardiac cells
TBX5 heterozygous WTC-11-derived cardiac myocytes - differentiation day 23
Enzyme
Arima - A1, A2
in situ Hi-C
WTC-11 differentiated to cardiac muscle cell
in situ Hi-C on an allelic series of iPSCs differentiated to cardiac cells
Crispr treated, unmodified control WTC-11-derived cardiac myocytes - differentiation day 23
Enzyme
Arima - A1, A2
in situ Hi-C
WTC-11 differentiated to cardiac muscle cell
in situ Hi-C on an allelic series of iPSCs differentiated to cardiac cells
Untreated, unmodified WTC-11-derived cardiac myocytes - differentiation day 23
Enzyme
Arima - A1, A2
- fin -