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Sample Category
Organ/System
Modifications
Set Type
17 Common Properties
 Project
4DN
 Lab
Benoit Bruneau, UCSF
 Experiment Category
Sequencing
 Experiment Type
Hi-C
 Dataset
in situ Hi-C on an allelic series of iPSCs differentiated to cardiac cells
 Organism
Human
 Sample Type
in vitro differentiated cells
 Sample Tier
Unclassified
 Sample
WTC-11 differentiated to cardiac muscle cell
 Tissue Source
cardiac muscle cell
 Publication
Grant ZL et al. (2025) PMID:39829922
 Treatments
No value
 Assay Details
Enzyme: Arima - A1, A2
 Center
Bruneau
 Status
Released
 Commendations
No value
 Warnings
Biosample Metadata Incomplete
Title
Experiment Type
Biosample
Dataset
Condition
Assay Details
Lab
in situ Hi-C
WTC-11 differentiated to cardiac muscle cell
in situ Hi-C on an allelic series of iPSCs differentiated to cardiac cells
TBX5 homozygous (compound heterozygous) WTC-11-derived cardiac myocytes - differentiation day 23
Enzyme
Arima - A1, A2
in situ Hi-C
WTC-11 differentiated to cardiac muscle cell
in situ Hi-C on an allelic series of iPSCs differentiated to cardiac cells
TBX5 heterozygous WTC-11-derived cardiac myocytes - differentiation day 23
Enzyme
Arima - A1, A2
in situ Hi-C
WTC-11 differentiated to cardiac muscle cell
in situ Hi-C on an allelic series of iPSCs differentiated to cardiac cells
Crispr treated, unmodified control WTC-11-derived cardiac myocytes - differentiation day 23
Enzyme
Arima - A1, A2
in situ Hi-C
WTC-11 differentiated to cardiac muscle cell
in situ Hi-C on an allelic series of iPSCs differentiated to cardiac cells
Untreated, unmodified WTC-11-derived cardiac myocytes - differentiation day 23
Enzyme
Arima - A1, A2
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