ExperimentSet4DNES1JP4KZ1
released
October 30th, 2021 at 1:35am
Source Publication
Cohesin-mediated loop anchors confine the locations of human replication origins.
Emerson DJ, Zhao PA, et al., Nature 2022
Assay Description
Experiment Set Properties
Set Type
Replicate
Organism
Sample Type
immortalized cells
Experiment Type(s)
Modification Type
None
Treatment Type
Chemical
Assay Details
Enzyme: Arima - A1, A2
10 Processed Files
Quality Metrics
Experiment
For File
Filtered Reads
Cis reads (>20kb)
Short cis reads
Trans Reads
Report
Details
Experiment
4DNEXZCWZM6H
Bio Rep 1, Tec Rep 1
in situ Hi-C on HCT116 with Crispr generated mClover and AID-tagged WAPL, AAVS1-OsTIR1(F74G) with Arima - A1, A2Experiment
4DNEXX7VITUA
Bio Rep 2, Tec Rep 1
in situ Hi-C on HCT116 with Crispr generated mClover and AID-tagged WAPL, AAVS1-OsTIR1(F74G) with Arima - A1, A2Experiment
For File
Failed Balancing
Details
Experiment
For File
Total Reads
Unmapped Reads
Multimapped Reads
Duplicate Reads
Walks
Minor Contigs
Details
Experiment
4DNEXZCWZM6H
Bio Rep 1, Tec Rep 1
in situ Hi-C on HCT116 with Crispr generated mClover and AID-tagged WAPL, AAVS1-OsTIR1(F74G) with Arima - A1, A2Experiment
4DNEXX7VITUA
Bio Rep 2, Tec Rep 1
in situ Hi-C on HCT116 with Crispr generated mClover and AID-tagged WAPL, AAVS1-OsTIR1(F74G) with Arima - A1, A2