ExperimentSetReplicate

ExperimentSet4DNES43FS97D
released

Replicates of GAM on mouse pyramidal glutamatergic neurons from cornus ammonis 1 region of the hippocampus from C57BL/6J Floxed-Satb2 background mouse

   August 18th, 2020 at 9:50pm
Source Publication

Batch Quality Information for GAM libraries (NP fastq files) in this Dataset  


NOTE The excel workbooks available from the following links - one file per replicate contain information that can be used to evaluate the quality of the GAM libraries linked to this dataset.

Replicate 1 downloadable from here

Replicate 2 downloadable from here

Each workbook consists of 2 sheets. The first provides descriptions and terms used in the second and highlights those that may be used to evaluate quality of the libraries. The second sheet provides information on each individual GAM library linked to this dataset. Each library corresponds to a single FastQ file that can be identified using the provided Sample_ID in the first column.


Experiment Set Properties  


Set Type 
Replicate
Organism 
Sample Type 
tissue
Experiment Type(s) 
Modification Type 
None
Treatment Type 
None
Assay Details 
None

506 Raw Files

Biosample
Experiment
File
File Size
Sequence Length
Overall Quality
Total Sequences
Biosample
4DNBSFK8IU1Q
Bio Replicate 1
Experiment
4DNEXV4EFZV8
Tech Replicate 1
File
136.71 MB
35-75
  Pass
2.8m
File
150.82 MB
35-75
  Pass
3.13m
File
130.18 MB
35-75
  Pass
2.73m
File
140.67 MB
35-75
  Pass
2.93m
File
187.09 MB
35-75
  Pass
3.91m
File
173.03 MB
35-75
  Pass
3.61m
File
140.07 MB
35-75
  Pass
2.88m
Show 100 More Files (Total 211 Files to Show)
Biosample
4DNBSEDL5D9Y
Bio Replicate 2
Experiment
4DNEXXCYTAMT
Tech Replicate 1
File
117.94 MB
35-75
  Pass
2.59m
File
120.05 MB
35-75
  Pass
2.66m
File
116.04 MB
35-75
  Pass
2.58m
File
119.56 MB
35-75
  Pass
2.69m
File
149.62 MB
35-75
  Pass
3.36m
File
125.32 MB
35-75
  Pass
2.8m
File
116.35 MB
35-75
  Pass
2.56m
Show 100 More Files (Total 281 Files to Show)