ExperimentSetReplicate

ExperimentSet4DNESBBJHHJ7
released
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in situ Hi-C on WTC-11 iPSC cells with a dTAG TBX5 degron differentiated for 20 days to atrial cardiac myocytes - DMSO treatment.

   October 26th, 2025 at 9:22pm

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
in vitro differentiated cells
Sample 
dTAG-TBX5 iPSC line differentiated to cardiac muscle cell
Experiment Type(s) 
in situ Hi-C
Modification Type 
None
Treatment Type 
Chemical
Assay Details 
Enzyme: DdeI and DpnII

8 Processed Files

Quality Metrics

Experiment
For File
Filtered Reads
Cis reads (>20kb)
Short cis reads
Trans Reads
Details
From Multiple Experiments
4DNESBBJHHJ7
Multiple Experiments
File
Contact List-combined (pairs)
4DNFI5YLRQ8T
960.21m
48.912%
36.307%
14.781%
Experiment
4DNEX89AXSWJ
Bio Rep 1, Tec Rep 1
in situ Hi-C on dTAG-TBX5 iPSC line differentiated to cardiac muscle cell with DdeI and DpnII
File
Contact List-replicate (pairs)
4DNFIPKFERUO
544.5m
49.612%
35.152%
15.236%
Experiment
4DNEXEJ7E9UA
Bio Rep 2, Tec Rep 1
in situ Hi-C on dTAG-TBX5 iPSC line differentiated to cardiac muscle cell with DdeI and DpnII
File
Contact List-replicate (pairs)
4DNFINP5RCZJ
490.92m
47.896%
36.194%
15.911%
Experiment
For File
Failed Balancing
Details
From Multiple Experiments
4DNESBBJHHJ7
Multiple Experiments
File
Contact Matrix (mcool)
4DNFIFV23ILF
None