ExperimentSetReplicate

ExperimentSet4DNESHNKZ18R
released
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in situ Hi-C on WTC-11 iPSC cells with a dTAG TBX5 degron differentiated for 20 days to atrial cardiac myocytes - dTAGv1 treatment.

   October 26th, 2025 at 9:22pm

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
in vitro differentiated cells
Sample 
dTAG-TBX5 iPSC line differentiated to cardiac muscle cell
Experiment Type(s) 
in situ Hi-C
Modification Type 
None
Treatment Type 
Chemical
Assay Details 
Enzyme: DdeI and DpnII

8 Processed Files

Quality Metrics

Experiment
For File
Filtered Reads
Cis reads (>20kb)
Short cis reads
Trans Reads
Details
From Multiple Experiments
4DNESHNKZ18R
Multiple Experiments
File
Contact List-combined (pairs)
4DNFIPD9B9QE
769.75m
47.81%
36.897%
15.293%
Experiment
4DNEXIYIRGYU
Bio Rep 1, Tec Rep 1
in situ Hi-C on dTAG-TBX5 iPSC line differentiated to cardiac muscle cell with DdeI and DpnII
File
Contact List-replicate (pairs)
4DNFINNFF9RI
361.47m
47.968%
35.725%
16.307%
Experiment
4DNEXRERYQVQ
Bio Rep 2, Tec Rep 1
in situ Hi-C on dTAG-TBX5 iPSC line differentiated to cardiac muscle cell with DdeI and DpnII
File
Contact List-replicate (pairs)
4DNFIRTJO955
468.37m
47.437%
36.511%
16.052%
Experiment
For File
Failed Balancing
Details
From Multiple Experiments
4DNESHNKZ18R
Multiple Experiments
File
Contact Matrix (mcool)
4DNFIV1TAIKG
None