ExperimentSetReplicate

ExperimentSet4DNESUWE1JXZ
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SLAM-seq on G1 stage 120 min dTAG treated dTAG-NIPBL clone D7 - 120 min 4sU labeling

   October 18th, 2024 at 2:36pm
Source Publication
Genome-wide in vivo dynamics of cohesin-mediated loop extrusion and its role in transcription activation
Popay TM, Pant A, et al., bioRxiv 2024

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
dTAG-NIPBL hTERT-RPE-1 - clone D7
Experiment Type(s) 
SLAM-seq
Modification Type 
None
Treatment Type 
Chemical
Assay Details 
None

6 Raw Files

Biosample
Experiment
File
File Size
Sequence Length
Overall Quality
Total Sequences
Biosample
4DNBSN86TPJX
Bio Replicate 1
Experiment
4DNEXNTUVFDY
Tech Replicate 1
Pair
File
4DNFIHXWJ5SZ
7.04 GB
101
  Pass
142.97m
File
4DNFIHSCZ69Y
7.1 GB
101
  Pass
142.97m
Biosample
4DNBSFFUVBEL
Bio Replicate 2
Experiment
4DNEXBW9M4YW
Tech Replicate 1
Pair
File
4DNFI1VYGFF7
2.53 GB
101
  Pass
50.75m
File
4DNFIWGLVYU9
2.55 GB
101
  Pass
50.75m
Biosample
4DNBS35AOAPM
Bio Replicate 3
Experiment
4DNEXAQ61XCL
Tech Replicate 1
Pair
File
4DNFIGRA6M3A
4.36 GB
101
  Pass
87.56m
File
4DNFIURNAMX4
4.38 GB
101
  Pass
87.56m