Experiment Set

4DNESZ8CUVEV
released

Custom Set: NHEK dilution Hi-C

   April 9th, 2017 at 5:34pm

Assay Description  



Experiment Set Properties  


Set Type 
Custom
Organism 
Sample Type 
primary cells
Sample 
Experiment Type(s) 
Modification Type 
None
Treatment Type 
None
Assay Details 
Enzyme: HindIII

2 Processed Files

Experiment
File
File Type
File Size
alignments (bam)
42.01 GB
contact list-replicate (pairs)
3.94 GB

Quality Metrics

Experiment
For File
Total Reads
Unmapped Reads
Multimapped Reads
Duplicate Reads
Walks
Minor Contigs
Details
File
Alignments (bam)
4DNFITPUR1RO
274.27m
5.305%
11.678%
3.387%
1.405%
0.409%
Experiment
For File
Filtered Reads
Cis reads (>20kb)
Short cis reads
Trans Reads
Report
Details
File
Contact List-replicate (pairs)
4DNFI8XISGKL
214.55m
52.054%
17.056%
30.891%