{"lab": {"@id": "/labs/job-dekker-lab/", "@type": ["Lab", "Item"], "title": "Job Dekker, UMMS", "uuid": "3c577664-affb-41c4-bf27-9e21c2fc1554", "correspondence": [{"contact_email": "am9iLmRla2tlckB1bWFzc21lZC5lZHU=", "@id": "/users/83b5073a-069b-4162-9b30-6f42d5551e34/", "display_title": "Job Dekker"}], "status": "current", "display_title": "Job Dekker, UMMS", "pi": {"error": "no view permissions"}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin", "role.lab_submitter", "submits_for.3c577664-affb-41c4-bf27-9e21c2fc1554"]}}, "award": {"description": "Funding source is from outside 4DN.", "center_title": "External", "@id": "/awards/external-award/", "center": "External", "project": "External", "uuid": "12a92962-8265-4fc0-b2f8-cf14f05db58b", "status": "current", "display_title": "EXTERNAL AWARD", "name": "external-award", "@type": ["Award", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "files": [{"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIKFVBPT3/@@download/4DNFIKFVBPT3.fastq.gz", "uuid": "03a7af15-022c-4389-8db6-cfe12811ed39", "file_type_detailed": "reads (fastq)", "upload_key": "03a7af15-022c-4389-8db6-cfe12811ed39/4DNFIKFVBPT3.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938746"], "file_type": "reads", "accession": "4DNFIKFVBPT3", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIKFVBPT3/", "file_size": 386951049, "display_title": "4DNFIKFVBPT3.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-19", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIKFVBPT3/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/ac390585-fb81-4707-afac-a2db809d5ecd/", "uuid": "ac390585-fb81-4707-afac-a2db809d5ecd", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIV67WDIH", "display_title": "4DNFIV67WDIH.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFIV67WDIH/", "uuid": "83e18ecb-228b-405f-b9e9-297e66d4bd7d", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938746", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938746"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIV67WDIH/@@download/4DNFIV67WDIH.fastq.gz", "uuid": "83e18ecb-228b-405f-b9e9-297e66d4bd7d", "file_type_detailed": "reads (fastq)", "upload_key": "83e18ecb-228b-405f-b9e9-297e66d4bd7d/4DNFIV67WDIH.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938746"], "file_type": "reads", "accession": "4DNFIV67WDIH", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIV67WDIH/", "file_size": 372731891, "display_title": "4DNFIV67WDIH.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIV67WDIH/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/924cf1c1-f98a-4fbc-8a83-f0053c5007b3/", "uuid": "924cf1c1-f98a-4fbc-8a83-f0053c5007b3", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIKFVBPT3", "display_title": "4DNFIKFVBPT3.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFIKFVBPT3/", "uuid": "03a7af15-022c-4389-8db6-cfe12811ed39", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938746", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938746"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIFKNACCG/@@download/4DNFIFKNACCG.fastq.gz", "uuid": "f6f61627-c589-4146-a776-8ff3fe6db906", "file_type_detailed": "reads (fastq)", "upload_key": "f6f61627-c589-4146-a776-8ff3fe6db906/4DNFIFKNACCG.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938742"], "file_type": "reads", "accession": "4DNFIFKNACCG", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIFKNACCG/", "file_size": 404092710, "display_title": "4DNFIFKNACCG.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIFKNACCG/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/84fb2139-893e-4f70-827f-43ba0055767c/", "uuid": "84fb2139-893e-4f70-827f-43ba0055767c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIAPJNPJV", "display_title": "4DNFIAPJNPJV.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFIAPJNPJV/", "uuid": "5dffcf51-97b2-4cb1-ae7b-7c1e2fdde87e", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938742", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938742"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIAPJNPJV/@@download/4DNFIAPJNPJV.fastq.gz", "uuid": "5dffcf51-97b2-4cb1-ae7b-7c1e2fdde87e", "file_type_detailed": "reads (fastq)", "upload_key": "5dffcf51-97b2-4cb1-ae7b-7c1e2fdde87e/4DNFIAPJNPJV.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938742"], "file_type": "reads", "accession": "4DNFIAPJNPJV", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIAPJNPJV/", "file_size": 359475201, "display_title": "4DNFIAPJNPJV.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIAPJNPJV/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/7eabefa3-5280-4ec7-bbef-9c128bd0085f/", "uuid": "7eabefa3-5280-4ec7-bbef-9c128bd0085f", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIFKNACCG", "display_title": "4DNFIFKNACCG.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFIFKNACCG/", "uuid": "f6f61627-c589-4146-a776-8ff3fe6db906", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938742", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938742"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIQ8B8ZDU/@@download/4DNFIQ8B8ZDU.fastq.gz", "uuid": "8c562507-6718-4859-a23a-31cb1c0a72ed", "file_type_detailed": "reads (fastq)", "upload_key": "8c562507-6718-4859-a23a-31cb1c0a72ed/4DNFIQ8B8ZDU.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938741"], "file_type": "reads", "accession": "4DNFIQ8B8ZDU", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIQ8B8ZDU/", "file_size": 403784494, "display_title": "4DNFIQ8B8ZDU.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIQ8B8ZDU/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/4b22267a-2078-499d-bae3-02d128c0cc43/", "uuid": "4b22267a-2078-499d-bae3-02d128c0cc43", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFI19E7UTE", "display_title": "4DNFI19E7UTE.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFI19E7UTE/", "uuid": "b8161d55-e624-4594-9987-f988edced249", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938741", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938741"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFI19E7UTE/@@download/4DNFI19E7UTE.fastq.gz", "uuid": "b8161d55-e624-4594-9987-f988edced249", "file_type_detailed": "reads (fastq)", "upload_key": "b8161d55-e624-4594-9987-f988edced249/4DNFI19E7UTE.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938741"], "file_type": "reads", "accession": "4DNFI19E7UTE", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFI19E7UTE/", "file_size": 356637950, "display_title": "4DNFI19E7UTE.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI19E7UTE/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/d050d2c3-4a0d-4084-834f-d32606ef0c52/", "uuid": "d050d2c3-4a0d-4084-834f-d32606ef0c52", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIQ8B8ZDU", "display_title": "4DNFIQ8B8ZDU.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFIQ8B8ZDU/", "uuid": "8c562507-6718-4859-a23a-31cb1c0a72ed", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938741", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938741"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIUGMMHDL/@@download/4DNFIUGMMHDL.fastq.gz", "uuid": "c7d3f935-99f4-4806-bf5b-f6be4041de00", "file_type_detailed": "reads (fastq)", "upload_key": "c7d3f935-99f4-4806-bf5b-f6be4041de00/4DNFIUGMMHDL.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938738"], "file_type": "reads", "accession": "4DNFIUGMMHDL", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIUGMMHDL/", "file_size": 410443166, "display_title": "4DNFIUGMMHDL.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIUGMMHDL/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/3c404be6-a1e1-4e76-9644-25b1702cf113/", "uuid": "3c404be6-a1e1-4e76-9644-25b1702cf113", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIGSA4OSV", "display_title": "4DNFIGSA4OSV.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFIGSA4OSV/", "uuid": "e87f210b-76fd-4e1a-b3fa-1647f162ecab", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938738", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938738"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIGSA4OSV/@@download/4DNFIGSA4OSV.fastq.gz", "uuid": "e87f210b-76fd-4e1a-b3fa-1647f162ecab", "file_type_detailed": "reads (fastq)", "upload_key": "e87f210b-76fd-4e1a-b3fa-1647f162ecab/4DNFIGSA4OSV.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938738"], "file_type": "reads", "accession": "4DNFIGSA4OSV", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIGSA4OSV/", "file_size": 344691956, "display_title": "4DNFIGSA4OSV.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIGSA4OSV/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/b1091279-ebb4-47db-aaf0-7603709aa577/", "uuid": "b1091279-ebb4-47db-aaf0-7603709aa577", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIUGMMHDL", "display_title": "4DNFIUGMMHDL.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFIUGMMHDL/", "uuid": "c7d3f935-99f4-4806-bf5b-f6be4041de00", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938738", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938738"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIEO4K81Y/@@download/4DNFIEO4K81Y.fastq.gz", "uuid": "e461d41b-c64f-4ea3-91df-cefb543f3c63", "file_type_detailed": "reads (fastq)", "upload_key": "e461d41b-c64f-4ea3-91df-cefb543f3c63/4DNFIEO4K81Y.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938737"], "file_type": "reads", "accession": "4DNFIEO4K81Y", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIEO4K81Y/", "file_size": 408499495, "display_title": "4DNFIEO4K81Y.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIEO4K81Y/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/15199db0-738e-4b26-b527-6690a7877f77/", "uuid": "15199db0-738e-4b26-b527-6690a7877f77", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIWP3OVUY", "display_title": "4DNFIWP3OVUY.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFIWP3OVUY/", "uuid": "6952fbbf-7d71-4f67-8df7-5343704683c2", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938737", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938737"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIWP3OVUY/@@download/4DNFIWP3OVUY.fastq.gz", "uuid": "6952fbbf-7d71-4f67-8df7-5343704683c2", "file_type_detailed": "reads (fastq)", "upload_key": "6952fbbf-7d71-4f67-8df7-5343704683c2/4DNFIWP3OVUY.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938737"], "file_type": "reads", "accession": "4DNFIWP3OVUY", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIWP3OVUY/", "file_size": 361837682, "display_title": "4DNFIWP3OVUY.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIWP3OVUY/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/e1f9cd21-1b59-4e92-bd23-ff64ecd50bab/", "uuid": "e1f9cd21-1b59-4e92-bd23-ff64ecd50bab", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIEO4K81Y", "display_title": "4DNFIEO4K81Y.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFIEO4K81Y/", "uuid": "e461d41b-c64f-4ea3-91df-cefb543f3c63", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938737", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938737"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFI6IGKBHW/@@download/4DNFI6IGKBHW.fastq.gz", "uuid": "a0b96aa1-6c67-447a-958f-ad3c427fc568", "file_type_detailed": "reads (fastq)", "upload_key": "a0b96aa1-6c67-447a-958f-ad3c427fc568/4DNFI6IGKBHW.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938736"], "file_type": "reads", "accession": "4DNFI6IGKBHW", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFI6IGKBHW/", "file_size": 408709888, "display_title": "4DNFI6IGKBHW.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI6IGKBHW/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/b1a3bd62-c17c-489b-ade4-002aac18b2a0/", "uuid": "b1a3bd62-c17c-489b-ade4-002aac18b2a0", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIWFN7LNS", "display_title": "4DNFIWFN7LNS.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFIWFN7LNS/", "uuid": "4a8e6664-b7a9-475d-87fc-501e0614f018", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938736", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938736"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIWFN7LNS/@@download/4DNFIWFN7LNS.fastq.gz", "uuid": "4a8e6664-b7a9-475d-87fc-501e0614f018", "file_type_detailed": "reads (fastq)", "upload_key": "4a8e6664-b7a9-475d-87fc-501e0614f018/4DNFIWFN7LNS.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938736"], "file_type": "reads", "accession": "4DNFIWFN7LNS", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIWFN7LNS/", "file_size": 341366867, "display_title": "4DNFIWFN7LNS.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIWFN7LNS/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/6466e4d6-a9b3-4972-91c1-82e695b8b7b3/", "uuid": "6466e4d6-a9b3-4972-91c1-82e695b8b7b3", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFI6IGKBHW", "display_title": "4DNFI6IGKBHW.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFI6IGKBHW/", "uuid": "a0b96aa1-6c67-447a-958f-ad3c427fc568", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938736", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938736"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFI8HJSLKW/@@download/4DNFI8HJSLKW.fastq.gz", "uuid": "d786a421-bad1-44e4-8744-6158e0f265e2", "file_type_detailed": "reads (fastq)", "upload_key": "d786a421-bad1-44e4-8744-6158e0f265e2/4DNFI8HJSLKW.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938735"], "file_type": "reads", "accession": "4DNFI8HJSLKW", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFI8HJSLKW/", "file_size": 384576517, "display_title": "4DNFI8HJSLKW.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI8HJSLKW/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/b0f44fa6-9d8c-494c-be60-0019afc8f156/", "uuid": "b0f44fa6-9d8c-494c-be60-0019afc8f156", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIUGWC5FY", "display_title": "4DNFIUGWC5FY.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFIUGWC5FY/", "uuid": "41eea73e-ec35-492c-b25a-c359165449e1", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938735", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938735"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIUGWC5FY/@@download/4DNFIUGWC5FY.fastq.gz", "uuid": "41eea73e-ec35-492c-b25a-c359165449e1", "file_type_detailed": "reads (fastq)", "upload_key": "41eea73e-ec35-492c-b25a-c359165449e1/4DNFIUGWC5FY.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938735"], "file_type": "reads", "accession": "4DNFIUGWC5FY", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIUGWC5FY/", "file_size": 361559729, "display_title": "4DNFIUGWC5FY.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIUGWC5FY/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/9cb8c9e4-4b22-40f9-893a-bbef8d884049/", "uuid": "9cb8c9e4-4b22-40f9-893a-bbef8d884049", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFI8HJSLKW", "display_title": "4DNFI8HJSLKW.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFI8HJSLKW/", "uuid": "d786a421-bad1-44e4-8744-6158e0f265e2", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938735", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938735"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFI9JW9U6B/@@download/4DNFI9JW9U6B.fastq.gz", "uuid": "b047b7ac-7007-4459-97cc-15be319736cb", "file_type_detailed": "reads (fastq)", "upload_key": "b047b7ac-7007-4459-97cc-15be319736cb/4DNFI9JW9U6B.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938734"], "file_type": "reads", "accession": "4DNFI9JW9U6B", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFI9JW9U6B/", "file_size": 407607626, "display_title": "4DNFI9JW9U6B.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI9JW9U6B/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/79fe0867-c8a1-40e7-a5ef-0b018b24cb55/", "uuid": "79fe0867-c8a1-40e7-a5ef-0b018b24cb55", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFI5TITZR1", "display_title": "4DNFI5TITZR1.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFI5TITZR1/", "uuid": "1c24e6c1-b653-4e6c-b8be-7677cf922a1a", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938734", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938734"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFI5TITZR1/@@download/4DNFI5TITZR1.fastq.gz", "uuid": "1c24e6c1-b653-4e6c-b8be-7677cf922a1a", "file_type_detailed": "reads (fastq)", "upload_key": "1c24e6c1-b653-4e6c-b8be-7677cf922a1a/4DNFI5TITZR1.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938734"], "file_type": "reads", "accession": "4DNFI5TITZR1", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFI5TITZR1/", "file_size": 338908003, "display_title": "4DNFI5TITZR1.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI5TITZR1/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/9e67ecda-8cd3-4568-8108-8f5e29191357/", "uuid": "9e67ecda-8cd3-4568-8108-8f5e29191357", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFI9JW9U6B", "display_title": "4DNFI9JW9U6B.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFI9JW9U6B/", "uuid": "b047b7ac-7007-4459-97cc-15be319736cb", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938734", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938734"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFI5YHXLUV/@@download/4DNFI5YHXLUV.fastq.gz", "uuid": "7dc1f015-e2cd-4784-8231-c70ae4b44589", "file_type_detailed": "reads (fastq)", "upload_key": "7dc1f015-e2cd-4784-8231-c70ae4b44589/4DNFI5YHXLUV.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938733"], "file_type": "reads", "accession": "4DNFI5YHXLUV", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFI5YHXLUV/", "file_size": 384853308, "display_title": "4DNFI5YHXLUV.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI5YHXLUV/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/94b7ae6b-8afe-4a25-a9fe-b5b02b9e06e3/", "uuid": "94b7ae6b-8afe-4a25-a9fe-b5b02b9e06e3", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIB984YM8", "display_title": "4DNFIB984YM8.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFIB984YM8/", "uuid": "ff8c0519-7c41-4589-9d94-785a54392b3b", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938733", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938733"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIB984YM8/@@download/4DNFIB984YM8.fastq.gz", "uuid": "ff8c0519-7c41-4589-9d94-785a54392b3b", "file_type_detailed": "reads (fastq)", "upload_key": "ff8c0519-7c41-4589-9d94-785a54392b3b/4DNFIB984YM8.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938733"], "file_type": "reads", "accession": "4DNFIB984YM8", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIB984YM8/", "file_size": 358557358, "display_title": "4DNFIB984YM8.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIB984YM8/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/b213bc4b-b162-4c5a-b044-4565edd8cfdb/", "uuid": "b213bc4b-b162-4c5a-b044-4565edd8cfdb", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFI5YHXLUV", "display_title": "4DNFI5YHXLUV.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFI5YHXLUV/", "uuid": "7dc1f015-e2cd-4784-8231-c70ae4b44589", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938733", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938733"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIBPZ14JK/@@download/4DNFIBPZ14JK.fastq.gz", "uuid": "a56db126-693a-45ef-8d56-447f6afb15bb", "file_type_detailed": "reads (fastq)", "upload_key": "a56db126-693a-45ef-8d56-447f6afb15bb/4DNFIBPZ14JK.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938732"], "file_type": "reads", "accession": "4DNFIBPZ14JK", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIBPZ14JK/", "file_size": 391066126, "display_title": "4DNFIBPZ14JK.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIBPZ14JK/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/27d09108-fb63-4bf9-86b5-def48550775c/", "uuid": "27d09108-fb63-4bf9-86b5-def48550775c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIJJYK27H", "display_title": "4DNFIJJYK27H.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFIJJYK27H/", "uuid": "9a6fcafb-3b6c-40bf-99dd-d3c32771d8f6", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938732", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938732"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIJJYK27H/@@download/4DNFIJJYK27H.fastq.gz", "uuid": "9a6fcafb-3b6c-40bf-99dd-d3c32771d8f6", "file_type_detailed": "reads (fastq)", "upload_key": "9a6fcafb-3b6c-40bf-99dd-d3c32771d8f6/4DNFIJJYK27H.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938732"], "file_type": "reads", "accession": "4DNFIJJYK27H", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIJJYK27H/", "file_size": 371188073, "display_title": "4DNFIJJYK27H.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIJJYK27H/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/93a979bd-a404-4226-95f8-b0b988f2be35/", "uuid": "93a979bd-a404-4226-95f8-b0b988f2be35", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIBPZ14JK", "display_title": "4DNFIBPZ14JK.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFIBPZ14JK/", "uuid": "a56db126-693a-45ef-8d56-447f6afb15bb", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938732", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938732"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIRZ3NRR9/@@download/4DNFIRZ3NRR9.fastq.gz", "uuid": "90b6ddbb-f30c-4ccf-aa23-ad485e3a6bf2", "file_type_detailed": "reads (fastq)", "upload_key": "90b6ddbb-f30c-4ccf-aa23-ad485e3a6bf2/4DNFIRZ3NRR9.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938731"], "file_type": "reads", "accession": "4DNFIRZ3NRR9", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIRZ3NRR9/", "file_size": 390485512, "display_title": "4DNFIRZ3NRR9.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-19", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIRZ3NRR9/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/5573c721-f7ea-456a-b7b2-6974a7ec700b/", "uuid": "5573c721-f7ea-456a-b7b2-6974a7ec700b", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFI4DF8NC6", "display_title": "4DNFI4DF8NC6.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFI4DF8NC6/", "uuid": "c2862878-68a1-41ad-b9b4-cd02bfbd4a38", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938731", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938731"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFI4DF8NC6/@@download/4DNFI4DF8NC6.fastq.gz", "uuid": "c2862878-68a1-41ad-b9b4-cd02bfbd4a38", "file_type_detailed": "reads (fastq)", "upload_key": "c2862878-68a1-41ad-b9b4-cd02bfbd4a38/4DNFI4DF8NC6.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938731"], "file_type": "reads", "accession": "4DNFI4DF8NC6", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFI4DF8NC6/", "file_size": 350335605, "display_title": "4DNFI4DF8NC6.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI4DF8NC6/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/c9a72641-a21a-44d9-af5e-f6c8be33dfd9/", "uuid": "c9a72641-a21a-44d9-af5e-f6c8be33dfd9", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIRZ3NRR9", "display_title": "4DNFIRZ3NRR9.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFIRZ3NRR9/", "uuid": "90b6ddbb-f30c-4ccf-aa23-ad485e3a6bf2", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938731", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938731"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFI363DGSM/@@download/4DNFI363DGSM.fastq.gz", "uuid": "be8a761a-9bc2-46d7-8c05-4c818aa47291", "file_type_detailed": "reads (fastq)", "upload_key": "be8a761a-9bc2-46d7-8c05-4c818aa47291/4DNFI363DGSM.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938730"], "file_type": "reads", "accession": "4DNFI363DGSM", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFI363DGSM/", "file_size": 390604115, "display_title": "4DNFI363DGSM.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI363DGSM/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/0a79d97c-7fd3-4b02-8af9-1ed35e047ffe/", "uuid": "0a79d97c-7fd3-4b02-8af9-1ed35e047ffe", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIP3K25GJ", "display_title": "4DNFIP3K25GJ.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFIP3K25GJ/", "uuid": "3f373a9a-38de-4fd6-9e5a-ad7cddff1c4a", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938730", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938730"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIP3K25GJ/@@download/4DNFIP3K25GJ.fastq.gz", "uuid": "3f373a9a-38de-4fd6-9e5a-ad7cddff1c4a", "file_type_detailed": "reads (fastq)", "upload_key": "3f373a9a-38de-4fd6-9e5a-ad7cddff1c4a/4DNFIP3K25GJ.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938730"], "file_type": "reads", "accession": "4DNFIP3K25GJ", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIP3K25GJ/", "file_size": 349959404, "display_title": "4DNFIP3K25GJ.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIP3K25GJ/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/4e49c657-7d72-4457-b7d5-191cb23b7de1/", "uuid": "4e49c657-7d72-4457-b7d5-191cb23b7de1", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFI363DGSM", "display_title": "4DNFI363DGSM.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFI363DGSM/", "uuid": "be8a761a-9bc2-46d7-8c05-4c818aa47291", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938730", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938730"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFISKGLLN2/@@download/4DNFISKGLLN2.fastq.gz", "uuid": "31339ba3-ab67-4cd8-b530-1d262f1d08b0", "file_type_detailed": "reads (fastq)", "upload_key": "31339ba3-ab67-4cd8-b530-1d262f1d08b0/4DNFISKGLLN2.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938729"], "file_type": "reads", "accession": "4DNFISKGLLN2", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFISKGLLN2/", "file_size": 389082576, "display_title": "4DNFISKGLLN2.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFISKGLLN2/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/3513a14a-0bff-4515-8907-8270f1123c9d/", "uuid": "3513a14a-0bff-4515-8907-8270f1123c9d", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFISK78QZK", "display_title": "4DNFISK78QZK.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFISK78QZK/", "uuid": "064299a8-95ce-4d94-9d84-64700f124c79", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938729", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938729"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFISK78QZK/@@download/4DNFISK78QZK.fastq.gz", "uuid": "064299a8-95ce-4d94-9d84-64700f124c79", "file_type_detailed": "reads (fastq)", "upload_key": "064299a8-95ce-4d94-9d84-64700f124c79/4DNFISK78QZK.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938729"], "file_type": "reads", "accession": "4DNFISK78QZK", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFISK78QZK/", "file_size": 344144246, "display_title": "4DNFISK78QZK.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFISK78QZK/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/4ae43eaf-c49c-41f0-aa55-8de1d49ef2be/", "uuid": "4ae43eaf-c49c-41f0-aa55-8de1d49ef2be", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFISKGLLN2", "display_title": "4DNFISKGLLN2.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFISKGLLN2/", "uuid": "31339ba3-ab67-4cd8-b530-1d262f1d08b0", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938729", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938729"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIUR9YXTV/@@download/4DNFIUR9YXTV.fastq.gz", "uuid": "9427a61e-afd4-42c6-b163-4546ca11ca1e", "file_type_detailed": "reads (fastq)", "upload_key": "9427a61e-afd4-42c6-b163-4546ca11ca1e/4DNFIUR9YXTV.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938728"], "file_type": "reads", "accession": "4DNFIUR9YXTV", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIUR9YXTV/", "file_size": 387179369, "display_title": "4DNFIUR9YXTV.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIUR9YXTV/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/8e847078-59d5-4f67-b571-fc365ba87434/", "uuid": "8e847078-59d5-4f67-b571-fc365ba87434", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFI4B6CNRK", "display_title": "4DNFI4B6CNRK.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFI4B6CNRK/", "uuid": "5aae7821-41c8-4df6-a5b0-18708f7be3be", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938728", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938728"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFI4B6CNRK/@@download/4DNFI4B6CNRK.fastq.gz", "uuid": "5aae7821-41c8-4df6-a5b0-18708f7be3be", "file_type_detailed": "reads (fastq)", "upload_key": "5aae7821-41c8-4df6-a5b0-18708f7be3be/4DNFI4B6CNRK.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938728"], "file_type": "reads", "accession": "4DNFI4B6CNRK", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFI4B6CNRK/", "file_size": 364260038, "display_title": "4DNFI4B6CNRK.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI4B6CNRK/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/f12254a6-63dd-4ccd-b36e-3b27a4583d08/", "uuid": "f12254a6-63dd-4ccd-b36e-3b27a4583d08", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIUR9YXTV", "display_title": "4DNFIUR9YXTV.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFIUR9YXTV/", "uuid": "9427a61e-afd4-42c6-b163-4546ca11ca1e", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938728", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938728"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIT8LM5AE/@@download/4DNFIT8LM5AE.fastq.gz", "uuid": "d984d8c4-a13c-4574-b17c-17a2a1700b3a", "file_type_detailed": "reads (fastq)", "upload_key": "d984d8c4-a13c-4574-b17c-17a2a1700b3a/4DNFIT8LM5AE.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938727"], "file_type": "reads", "accession": "4DNFIT8LM5AE", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIT8LM5AE/", "file_size": 386725923, "display_title": "4DNFIT8LM5AE.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIT8LM5AE/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/534efaf5-7053-489f-bf03-c531a938ad50/", "uuid": "534efaf5-7053-489f-bf03-c531a938ad50", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIUTZZSG3", "display_title": "4DNFIUTZZSG3.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFIUTZZSG3/", "uuid": "f1f6b833-3eb4-4315-aac0-f281761a4601", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938727", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938727"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIUTZZSG3/@@download/4DNFIUTZZSG3.fastq.gz", "uuid": "f1f6b833-3eb4-4315-aac0-f281761a4601", "file_type_detailed": "reads (fastq)", "upload_key": "f1f6b833-3eb4-4315-aac0-f281761a4601/4DNFIUTZZSG3.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938727"], "file_type": "reads", "accession": "4DNFIUTZZSG3", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIUTZZSG3/", "file_size": 341115154, "display_title": "4DNFIUTZZSG3.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIUTZZSG3/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/b8e928d2-2322-4f77-b3b5-c0435c2b7e90/", "uuid": "b8e928d2-2322-4f77-b3b5-c0435c2b7e90", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIT8LM5AE", "display_title": "4DNFIT8LM5AE.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFIT8LM5AE/", "uuid": "d984d8c4-a13c-4574-b17c-17a2a1700b3a", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938727", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938727"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFI4ES9OGE/@@download/4DNFI4ES9OGE.fastq.gz", "uuid": "9350e752-8271-4a96-9722-45d12333330d", "file_type_detailed": "reads (fastq)", "upload_key": "9350e752-8271-4a96-9722-45d12333330d/4DNFI4ES9OGE.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938726"], "file_type": "reads", "accession": "4DNFI4ES9OGE", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFI4ES9OGE/", "file_size": 386385522, "display_title": "4DNFI4ES9OGE.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI4ES9OGE/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/1c51dae5-e67f-4ff4-9ae8-a58144b6f741/", "uuid": "1c51dae5-e67f-4ff4-9ae8-a58144b6f741", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFITGFJJG6", "display_title": "4DNFITGFJJG6.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFITGFJJG6/", "uuid": "64f8d74f-77c9-4b77-82fd-fcab64e3cbc7", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938726", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938726"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFITGFJJG6/@@download/4DNFITGFJJG6.fastq.gz", "uuid": "64f8d74f-77c9-4b77-82fd-fcab64e3cbc7", "file_type_detailed": "reads (fastq)", "upload_key": "64f8d74f-77c9-4b77-82fd-fcab64e3cbc7/4DNFITGFJJG6.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938726"], "file_type": "reads", "accession": "4DNFITGFJJG6", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFITGFJJG6/", "file_size": 337012158, "display_title": "4DNFITGFJJG6.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFITGFJJG6/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/4f5d58a1-d5ed-4ce1-813b-ddc6231c9767/", "uuid": "4f5d58a1-d5ed-4ce1-813b-ddc6231c9767", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFI4ES9OGE", "display_title": "4DNFI4ES9OGE.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFI4ES9OGE/", "uuid": "9350e752-8271-4a96-9722-45d12333330d", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938726", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938726"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIY5QF918/@@download/4DNFIY5QF918.fastq.gz", "uuid": "edbcebe5-023a-4e30-a1ef-83b3b2b58c15", "file_type_detailed": "reads (fastq)", "upload_key": "edbcebe5-023a-4e30-a1ef-83b3b2b58c15/4DNFIY5QF918.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938750"], "file_type": "reads", "accession": "4DNFIY5QF918", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIY5QF918/", "file_size": 382017289, "display_title": "4DNFIY5QF918.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIY5QF918/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/8904ab1d-5fc6-44ad-b9a2-b9ebd4a49105/", "uuid": "8904ab1d-5fc6-44ad-b9a2-b9ebd4a49105", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFI9DY326I", "display_title": "4DNFI9DY326I.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFI9DY326I/", "uuid": "8efcffa3-c561-4b91-b8c2-8b0c00f83994", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938750", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938750"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFI9DY326I/@@download/4DNFI9DY326I.fastq.gz", "uuid": "8efcffa3-c561-4b91-b8c2-8b0c00f83994", "file_type_detailed": "reads (fastq)", "upload_key": "8efcffa3-c561-4b91-b8c2-8b0c00f83994/4DNFI9DY326I.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938750"], "file_type": "reads", "accession": "4DNFI9DY326I", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFI9DY326I/", "file_size": 339120478, "display_title": "4DNFI9DY326I.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI9DY326I/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/6f560bfd-b6b3-4126-ab39-553a7744e190/", "uuid": "6f560bfd-b6b3-4126-ab39-553a7744e190", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIY5QF918", "display_title": "4DNFIY5QF918.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFIY5QF918/", "uuid": "edbcebe5-023a-4e30-a1ef-83b3b2b58c15", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938750", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938750"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFI6KMXP5R/@@download/4DNFI6KMXP5R.fastq.gz", "uuid": "3051aa93-80ef-4638-9812-73fda7baa25f", "file_type_detailed": "reads (fastq)", "upload_key": "3051aa93-80ef-4638-9812-73fda7baa25f/4DNFI6KMXP5R.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938749"], "file_type": "reads", "accession": "4DNFI6KMXP5R", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFI6KMXP5R/", "file_size": 385373108, "display_title": "4DNFI6KMXP5R.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI6KMXP5R/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/e9c84898-2277-4ca1-8e3f-786a8027cd8b/", "uuid": "e9c84898-2277-4ca1-8e3f-786a8027cd8b", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIS5GBKMN", "display_title": "4DNFIS5GBKMN.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFIS5GBKMN/", "uuid": "d77ccbf7-1e9f-455d-984d-6bab5a6acbb8", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938749", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938749"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIS5GBKMN/@@download/4DNFIS5GBKMN.fastq.gz", "uuid": "d77ccbf7-1e9f-455d-984d-6bab5a6acbb8", "file_type_detailed": "reads (fastq)", "upload_key": "d77ccbf7-1e9f-455d-984d-6bab5a6acbb8/4DNFIS5GBKMN.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938749"], "file_type": "reads", "accession": "4DNFIS5GBKMN", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIS5GBKMN/", "file_size": 344096694, "display_title": "4DNFIS5GBKMN.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIS5GBKMN/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/1ad635be-0b19-4264-bd32-c5f4d12179bc/", "uuid": "1ad635be-0b19-4264-bd32-c5f4d12179bc", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFI6KMXP5R", "display_title": "4DNFI6KMXP5R.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFI6KMXP5R/", "uuid": "3051aa93-80ef-4638-9812-73fda7baa25f", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938749", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938749"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIC3XLHBL/@@download/4DNFIC3XLHBL.fastq.gz", "uuid": "7cea8893-7b0d-49e1-a713-d968c5f7d8fc", "file_type_detailed": "reads (fastq)", "upload_key": "7cea8893-7b0d-49e1-a713-d968c5f7d8fc/4DNFIC3XLHBL.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938748"], "file_type": "reads", "accession": "4DNFIC3XLHBL", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIC3XLHBL/", "file_size": 385619411, "display_title": "4DNFIC3XLHBL.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIC3XLHBL/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/ae956b62-f8aa-4746-945b-236cbacbc814/", "uuid": "ae956b62-f8aa-4746-945b-236cbacbc814", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFI9AGYEJE", "display_title": "4DNFI9AGYEJE.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFI9AGYEJE/", "uuid": "b0031b2c-4815-4ee5-8f1c-dea2ec6b6bd6", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938748", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938748"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFI9AGYEJE/@@download/4DNFI9AGYEJE.fastq.gz", "uuid": "b0031b2c-4815-4ee5-8f1c-dea2ec6b6bd6", "file_type_detailed": "reads (fastq)", "upload_key": "b0031b2c-4815-4ee5-8f1c-dea2ec6b6bd6/4DNFI9AGYEJE.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938748"], "file_type": "reads", "accession": "4DNFI9AGYEJE", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFI9AGYEJE/", "file_size": 341112092, "display_title": "4DNFI9AGYEJE.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-19", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI9AGYEJE/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/5ba38308-86c3-44e1-901f-7b1ef40399d2/", "uuid": "5ba38308-86c3-44e1-901f-7b1ef40399d2", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIC3XLHBL", "display_title": "4DNFIC3XLHBL.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFIC3XLHBL/", "uuid": "7cea8893-7b0d-49e1-a713-d968c5f7d8fc", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938748", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938748"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFITK1Y1BG/@@download/4DNFITK1Y1BG.fastq.gz", "uuid": "e6bdd0f6-501f-4657-94e7-1b6e2031bb45", "file_type_detailed": "reads (fastq)", "upload_key": "e6bdd0f6-501f-4657-94e7-1b6e2031bb45/4DNFITK1Y1BG.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938747"], "file_type": "reads", "accession": "4DNFITK1Y1BG", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFITK1Y1BG/", "file_size": 389348299, "display_title": "4DNFITK1Y1BG.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFITK1Y1BG/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/e12f1aa9-1ff7-420b-ae8b-446025e2df06/", "uuid": "e12f1aa9-1ff7-420b-ae8b-446025e2df06", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIQ8COQEH", "display_title": "4DNFIQ8COQEH.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFIQ8COQEH/", "uuid": "851a5caa-3820-49df-b9e9-34502dbc50bf", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938747", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938747"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIQ8COQEH/@@download/4DNFIQ8COQEH.fastq.gz", "uuid": "851a5caa-3820-49df-b9e9-34502dbc50bf", "file_type_detailed": "reads (fastq)", "upload_key": "851a5caa-3820-49df-b9e9-34502dbc50bf/4DNFIQ8COQEH.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938747"], "file_type": "reads", "accession": "4DNFIQ8COQEH", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIQ8COQEH/", "file_size": 377589936, "display_title": "4DNFIQ8COQEH.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIQ8COQEH/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/914c184b-cf69-467f-9aa0-1e22c37abd9d/", "uuid": "914c184b-cf69-467f-9aa0-1e22c37abd9d", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFITK1Y1BG", "display_title": "4DNFITK1Y1BG.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFITK1Y1BG/", "uuid": "e6bdd0f6-501f-4657-94e7-1b6e2031bb45", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938747", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938747"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIHCISL3F/@@download/4DNFIHCISL3F.fastq.gz", "uuid": "87be87a2-50be-4cbe-b15c-5d057a94368a", "file_type_detailed": "reads (fastq)", "upload_key": "87be87a2-50be-4cbe-b15c-5d057a94368a/4DNFIHCISL3F.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938751"], "file_type": "reads", "accession": "4DNFIHCISL3F", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIHCISL3F/", "file_size": 405410966, "display_title": "4DNFIHCISL3F.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIHCISL3F/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/8c5ae079-adfe-4e71-9968-501b8175c692/", "uuid": "8c5ae079-adfe-4e71-9968-501b8175c692", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIT3NI6RX", "display_title": "4DNFIT3NI6RX.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFIT3NI6RX/", "uuid": "cb469a4a-aa3d-46e1-8475-3b6c99a10cf5", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938751", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938751"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIT3NI6RX/@@download/4DNFIT3NI6RX.fastq.gz", "uuid": "cb469a4a-aa3d-46e1-8475-3b6c99a10cf5", "file_type_detailed": "reads (fastq)", "upload_key": "cb469a4a-aa3d-46e1-8475-3b6c99a10cf5/4DNFIT3NI6RX.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938751"], "file_type": "reads", "accession": "4DNFIT3NI6RX", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIT3NI6RX/", "file_size": 339437430, "display_title": "4DNFIT3NI6RX.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIT3NI6RX/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/d77e823d-5d11-4d87-98d1-57f98667351d/", "uuid": "d77e823d-5d11-4d87-98d1-57f98667351d", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIHCISL3F", "display_title": "4DNFIHCISL3F.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFIHCISL3F/", "uuid": "87be87a2-50be-4cbe-b15c-5d057a94368a", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938751", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938751"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFISB7BN8R/@@download/4DNFISB7BN8R.fastq.gz", "uuid": "8c00d834-c50b-478a-b42b-536a7fbb43ba", "file_type_detailed": "reads (fastq)", "upload_key": "8c00d834-c50b-478a-b42b-536a7fbb43ba/4DNFISB7BN8R.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938745"], "file_type": "reads", "accession": "4DNFISB7BN8R", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFISB7BN8R/", "file_size": 385268715, "display_title": "4DNFISB7BN8R.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFISB7BN8R/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/15a60812-6b3a-4e55-9f3f-5b6b2f2c8b5d/", "uuid": "15a60812-6b3a-4e55-9f3f-5b6b2f2c8b5d", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFI7HIAEHH", "display_title": "4DNFI7HIAEHH.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFI7HIAEHH/", "uuid": "e9f50a96-5bff-45fd-9ddf-08cf382cc8b8", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938745", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938745"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFI7HIAEHH/@@download/4DNFI7HIAEHH.fastq.gz", "uuid": "e9f50a96-5bff-45fd-9ddf-08cf382cc8b8", "file_type_detailed": "reads (fastq)", "upload_key": "e9f50a96-5bff-45fd-9ddf-08cf382cc8b8/4DNFI7HIAEHH.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938745"], "file_type": "reads", "accession": "4DNFI7HIAEHH", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFI7HIAEHH/", "file_size": 345158385, "display_title": "4DNFI7HIAEHH.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI7HIAEHH/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/bd6eff78-47ae-4216-8de7-1632137f82c1/", "uuid": "bd6eff78-47ae-4216-8de7-1632137f82c1", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFISB7BN8R", "display_title": "4DNFISB7BN8R.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFISB7BN8R/", "uuid": "8c00d834-c50b-478a-b42b-536a7fbb43ba", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938745", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938745"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIUARRFZ4/@@download/4DNFIUARRFZ4.fastq.gz", "uuid": "3cf05370-19eb-44e5-ae65-ec9932c73330", "file_type_detailed": "reads (fastq)", "upload_key": "3cf05370-19eb-44e5-ae65-ec9932c73330/4DNFIUARRFZ4.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938744"], "file_type": "reads", "accession": "4DNFIUARRFZ4", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIUARRFZ4/", "file_size": 383393754, "display_title": "4DNFIUARRFZ4.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIUARRFZ4/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/a430af45-185f-4f03-9d3d-5fc9cb208eca/", "uuid": "a430af45-185f-4f03-9d3d-5fc9cb208eca", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIBR7RCV9", "display_title": "4DNFIBR7RCV9.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFIBR7RCV9/", "uuid": "33ed60d7-12e7-49c9-9915-1e2ff5681893", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938744", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938744"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIBR7RCV9/@@download/4DNFIBR7RCV9.fastq.gz", "uuid": "33ed60d7-12e7-49c9-9915-1e2ff5681893", "file_type_detailed": "reads (fastq)", "upload_key": "33ed60d7-12e7-49c9-9915-1e2ff5681893/4DNFIBR7RCV9.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938744"], "file_type": "reads", "accession": "4DNFIBR7RCV9", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIBR7RCV9/", "file_size": 341606628, "display_title": "4DNFIBR7RCV9.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIBR7RCV9/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/30b5ee97-71e5-4beb-ad64-fd5e3c2d80ec/", "uuid": "30b5ee97-71e5-4beb-ad64-fd5e3c2d80ec", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIUARRFZ4", "display_title": "4DNFIUARRFZ4.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFIUARRFZ4/", "uuid": "3cf05370-19eb-44e5-ae65-ec9932c73330", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938744", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938744"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFI5NPMI8Z/@@download/4DNFI5NPMI8Z.fastq.gz", "uuid": "19e03fb9-5068-43d8-8b9a-1a9c76703672", "file_type_detailed": "reads (fastq)", "upload_key": "19e03fb9-5068-43d8-8b9a-1a9c76703672/4DNFI5NPMI8Z.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938743"], "file_type": "reads", "accession": "4DNFI5NPMI8Z", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFI5NPMI8Z/", "file_size": 381883249, "display_title": "4DNFI5NPMI8Z.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI5NPMI8Z/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/4f0d85a6-c1f7-4427-a30c-7c6ae8955877/", "uuid": "4f0d85a6-c1f7-4427-a30c-7c6ae8955877", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIO73DM7M", "display_title": "4DNFIO73DM7M.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFIO73DM7M/", "uuid": "92e5ec6e-6654-46d7-8e1e-5f2c67ac35fb", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938743", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938743"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIO73DM7M/@@download/4DNFIO73DM7M.fastq.gz", "uuid": "92e5ec6e-6654-46d7-8e1e-5f2c67ac35fb", "file_type_detailed": "reads (fastq)", "upload_key": "92e5ec6e-6654-46d7-8e1e-5f2c67ac35fb/4DNFIO73DM7M.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938743"], "file_type": "reads", "accession": "4DNFIO73DM7M", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIO73DM7M/", "file_size": 339765860, "display_title": "4DNFIO73DM7M.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIO73DM7M/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/bcd0c8ba-9d2c-4a59-88e0-e11e5561351d/", "uuid": "bcd0c8ba-9d2c-4a59-88e0-e11e5561351d", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFI5NPMI8Z", "display_title": "4DNFI5NPMI8Z.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFI5NPMI8Z/", "uuid": "19e03fb9-5068-43d8-8b9a-1a9c76703672", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938743", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938743"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIV47KW74/@@download/4DNFIV47KW74.fastq.gz", "uuid": "011d0bfe-0bd6-4630-97ae-71d975ad8689", "file_type_detailed": "reads (fastq)", "upload_key": "011d0bfe-0bd6-4630-97ae-71d975ad8689/4DNFIV47KW74.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938752"], "file_type": "reads", "accession": "4DNFIV47KW74", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIV47KW74/", "file_size": 383821262, "display_title": "4DNFIV47KW74.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-19", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIV47KW74/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/3796f8fb-e4d3-4e4a-9494-8c8724c07828/", "uuid": "3796f8fb-e4d3-4e4a-9494-8c8724c07828", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIEZYTNV4", "display_title": "4DNFIEZYTNV4.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFIEZYTNV4/", "uuid": "555e56db-5404-45e5-ae7f-4978c268f109", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938752", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938752"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIEZYTNV4/@@download/4DNFIEZYTNV4.fastq.gz", "uuid": "555e56db-5404-45e5-ae7f-4978c268f109", "file_type_detailed": "reads (fastq)", "upload_key": "555e56db-5404-45e5-ae7f-4978c268f109/4DNFIEZYTNV4.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938752"], "file_type": "reads", "accession": "4DNFIEZYTNV4", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIEZYTNV4/", "file_size": 341806560, "display_title": "4DNFIEZYTNV4.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIEZYTNV4/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/7898c102-88f2-4f0f-a76f-918d8f37e5a0/", "uuid": "7898c102-88f2-4f0f-a76f-918d8f37e5a0", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIV47KW74", "display_title": "4DNFIV47KW74.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFIV47KW74/", "uuid": "011d0bfe-0bd6-4630-97ae-71d975ad8689", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938752", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938752"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFI75KFJUE/@@download/4DNFI75KFJUE.fastq.gz", "uuid": "8d3498bd-a2c0-4e49-94e8-e7e0eac92855", "file_type_detailed": "reads (fastq)", "upload_key": "8d3498bd-a2c0-4e49-94e8-e7e0eac92855/4DNFI75KFJUE.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938740"], "file_type": "reads", "accession": "4DNFI75KFJUE", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFI75KFJUE/", "file_size": 389331399, "display_title": "4DNFI75KFJUE.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI75KFJUE/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/1f07cb25-8e20-4f56-8234-c9bc50aa1242/", "uuid": "1f07cb25-8e20-4f56-8234-c9bc50aa1242", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIY2RP21K", "display_title": "4DNFIY2RP21K.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFIY2RP21K/", "uuid": "8d11cf70-d5ac-40a9-ba21-4a913cce6b17", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938740", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938740"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIY2RP21K/@@download/4DNFIY2RP21K.fastq.gz", "uuid": "8d11cf70-d5ac-40a9-ba21-4a913cce6b17", "file_type_detailed": "reads (fastq)", "upload_key": "8d11cf70-d5ac-40a9-ba21-4a913cce6b17/4DNFIY2RP21K.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938740"], "file_type": "reads", "accession": "4DNFIY2RP21K", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIY2RP21K/", "file_size": 350396015, "display_title": "4DNFIY2RP21K.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIY2RP21K/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/97d5f541-32ee-4762-92af-5b951031dba4/", "uuid": "97d5f541-32ee-4762-92af-5b951031dba4", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFI75KFJUE", "display_title": "4DNFI75KFJUE.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFI75KFJUE/", "uuid": "8d3498bd-a2c0-4e49-94e8-e7e0eac92855", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938740", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938740"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIUKFAOP7/@@download/4DNFIUKFAOP7.fastq.gz", "uuid": "da20bc78-1d72-4ebc-8202-254102ea31fe", "file_type_detailed": "reads (fastq)", "upload_key": "da20bc78-1d72-4ebc-8202-254102ea31fe/4DNFIUKFAOP7.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938739"], "file_type": "reads", "accession": "4DNFIUKFAOP7", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIUKFAOP7/", "file_size": 410820944, "display_title": "4DNFIUKFAOP7.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIUKFAOP7/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/3dad0216-553c-475e-880b-897bebcffcfc/", "uuid": "3dad0216-553c-475e-880b-897bebcffcfc", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIETI48G4", "display_title": "4DNFIETI48G4.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFIETI48G4/", "uuid": "60dc3c6f-3f21-4e42-a137-f9b5044e5013", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938739", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938739"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIETI48G4/@@download/4DNFIETI48G4.fastq.gz", "uuid": "60dc3c6f-3f21-4e42-a137-f9b5044e5013", "file_type_detailed": "reads (fastq)", "upload_key": "60dc3c6f-3f21-4e42-a137-f9b5044e5013/4DNFIETI48G4.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938739"], "file_type": "reads", "accession": "4DNFIETI48G4", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIETI48G4/", "file_size": 347651087, "display_title": "4DNFIETI48G4.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIETI48G4/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/43a47ff8-3a13-47cd-aa8a-fcfaa7754e9d/", "uuid": "43a47ff8-3a13-47cd-aa8a-fcfaa7754e9d", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIUKFAOP7", "display_title": "4DNFIUKFAOP7.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFIUKFAOP7/", "uuid": "da20bc78-1d72-4ebc-8202-254102ea31fe", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938739", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938739"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIZCBSS1O/@@download/4DNFIZCBSS1O.fastq.gz", "uuid": "84bd8fb8-9dfc-47e9-9f45-cac1848d9971", "file_type_detailed": "reads (fastq)", "upload_key": "84bd8fb8-9dfc-47e9-9f45-cac1848d9971/4DNFIZCBSS1O.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938754"], "file_type": "reads", "accession": "4DNFIZCBSS1O", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIZCBSS1O/", "file_size": 387538037, "display_title": "4DNFIZCBSS1O.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIZCBSS1O/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/6705ebc4-b56e-447d-862c-e9796d150c2e/", "uuid": "6705ebc4-b56e-447d-862c-e9796d150c2e", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIQZTAXYF", "display_title": "4DNFIQZTAXYF.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFIQZTAXYF/", "uuid": "602b4d94-ece8-4599-94d2-bcdbf4985037", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938754", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938754"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIQZTAXYF/@@download/4DNFIQZTAXYF.fastq.gz", "uuid": "602b4d94-ece8-4599-94d2-bcdbf4985037", "file_type_detailed": "reads (fastq)", "upload_key": "602b4d94-ece8-4599-94d2-bcdbf4985037/4DNFIQZTAXYF.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938754"], "file_type": "reads", "accession": "4DNFIQZTAXYF", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIQZTAXYF/", "file_size": 347733862, "display_title": "4DNFIQZTAXYF.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIQZTAXYF/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/22494c93-b793-442a-a2be-687d7cbdb210/", "uuid": "22494c93-b793-442a-a2be-687d7cbdb210", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIZCBSS1O", "display_title": "4DNFIZCBSS1O.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFIZCBSS1O/", "uuid": "84bd8fb8-9dfc-47e9-9f45-cac1848d9971", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938754", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938754"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIBPPQLKU/@@download/4DNFIBPPQLKU.fastq.gz", "uuid": "5b610eef-aa1f-4a60-811b-e060a4e07708", "file_type_detailed": "reads (fastq)", "upload_key": "5b610eef-aa1f-4a60-811b-e060a4e07708/4DNFIBPPQLKU.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938755"], "file_type": "reads", "accession": "4DNFIBPPQLKU", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIBPPQLKU/", "file_size": 388274035, "display_title": "4DNFIBPPQLKU.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIBPPQLKU/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/b0ebb8b6-4a11-434d-9e96-c6dfce7afc33/", "uuid": "b0ebb8b6-4a11-434d-9e96-c6dfce7afc33", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFI2P6ADK5", "display_title": "4DNFI2P6ADK5.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFI2P6ADK5/", "uuid": "c0589c2b-d247-4eb3-8284-6c538f1e208f", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938755", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938755"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFI2P6ADK5/@@download/4DNFI2P6ADK5.fastq.gz", "uuid": "c0589c2b-d247-4eb3-8284-6c538f1e208f", "file_type_detailed": "reads (fastq)", "upload_key": "c0589c2b-d247-4eb3-8284-6c538f1e208f/4DNFI2P6ADK5.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938755"], "file_type": "reads", "accession": "4DNFI2P6ADK5", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFI2P6ADK5/", "file_size": 351398541, "display_title": "4DNFI2P6ADK5.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI2P6ADK5/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/36dbbf7b-6b8d-4ecb-9275-47f951da73c9/", "uuid": "36dbbf7b-6b8d-4ecb-9275-47f951da73c9", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIBPPQLKU", "display_title": "4DNFIBPPQLKU.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFIBPPQLKU/", "uuid": "5b610eef-aa1f-4a60-811b-e060a4e07708", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938755", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938755"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIL2GQIHJ/@@download/4DNFIL2GQIHJ.fastq.gz", "uuid": "3095056b-3da3-4343-a755-87c216cba929", "file_type_detailed": "reads (fastq)", "upload_key": "3095056b-3da3-4343-a755-87c216cba929/4DNFIL2GQIHJ.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938756"], "file_type": "reads", "accession": "4DNFIL2GQIHJ", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIL2GQIHJ/", "file_size": 390457331, "display_title": "4DNFIL2GQIHJ.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIL2GQIHJ/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/f81e042d-7a21-4c3e-9188-3c4f443b890e/", "uuid": "f81e042d-7a21-4c3e-9188-3c4f443b890e", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIZTE5B3Y", "display_title": "4DNFIZTE5B3Y.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFIZTE5B3Y/", "uuid": "586df791-bb75-4ea6-99f7-bae3a786cae8", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938756", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938756"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIZTE5B3Y/@@download/4DNFIZTE5B3Y.fastq.gz", "uuid": "586df791-bb75-4ea6-99f7-bae3a786cae8", "file_type_detailed": "reads (fastq)", "upload_key": "586df791-bb75-4ea6-99f7-bae3a786cae8/4DNFIZTE5B3Y.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938756"], "file_type": "reads", "accession": "4DNFIZTE5B3Y", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIZTE5B3Y/", "file_size": 376664331, "display_title": "4DNFIZTE5B3Y.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIZTE5B3Y/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/16f0d094-b71e-49fb-ab78-a21c4b1f92b7/", "uuid": "16f0d094-b71e-49fb-ab78-a21c4b1f92b7", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIL2GQIHJ", "display_title": "4DNFIL2GQIHJ.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFIL2GQIHJ/", "uuid": "3095056b-3da3-4343-a755-87c216cba929", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938756", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938756"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIYTIPA68/@@download/4DNFIYTIPA68.fastq.gz", "uuid": "f427b323-b32a-4d49-a825-30fbc7b534a1", "file_type_detailed": "reads (fastq)", "upload_key": "f427b323-b32a-4d49-a825-30fbc7b534a1/4DNFIYTIPA68.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938757"], "file_type": "reads", "accession": "4DNFIYTIPA68", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIYTIPA68/", "file_size": 381264996, "display_title": "4DNFIYTIPA68.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIYTIPA68/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/054bbf77-9a56-4d71-a500-3e7a811dbbbf/", "uuid": "054bbf77-9a56-4d71-a500-3e7a811dbbbf", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFI41Q2PEX", "display_title": "4DNFI41Q2PEX.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFI41Q2PEX/", "uuid": "e8c2d5f8-7437-4f2e-8ca0-f422ff764427", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938757", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938757"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFI41Q2PEX/@@download/4DNFI41Q2PEX.fastq.gz", "uuid": "e8c2d5f8-7437-4f2e-8ca0-f422ff764427", "file_type_detailed": "reads (fastq)", "upload_key": "e8c2d5f8-7437-4f2e-8ca0-f422ff764427/4DNFI41Q2PEX.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938757"], "file_type": "reads", "accession": "4DNFI41Q2PEX", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFI41Q2PEX/", "file_size": 336778297, "display_title": "4DNFI41Q2PEX.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI41Q2PEX/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/0a614db7-b29a-49e4-b520-04168d2cc85d/", "uuid": "0a614db7-b29a-49e4-b520-04168d2cc85d", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIYTIPA68", "display_title": "4DNFIYTIPA68.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFIYTIPA68/", "uuid": "f427b323-b32a-4d49-a825-30fbc7b534a1", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938757", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938757"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFI3EYLXFZ/@@download/4DNFI3EYLXFZ.fastq.gz", "uuid": "55769847-c5cd-4c04-8764-7b6c657b7e45", "file_type_detailed": "reads (fastq)", "upload_key": "55769847-c5cd-4c04-8764-7b6c657b7e45/4DNFI3EYLXFZ.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938758"], "file_type": "reads", "accession": "4DNFI3EYLXFZ", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFI3EYLXFZ/", "file_size": 381701347, "display_title": "4DNFI3EYLXFZ.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI3EYLXFZ/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/c914b303-6450-49c1-9447-a4b49fe64306/", "uuid": "c914b303-6450-49c1-9447-a4b49fe64306", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIIHYR98S", "display_title": "4DNFIIHYR98S.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFIIHYR98S/", "uuid": "e6d98768-fc3c-42b4-b07f-d1d5b57b8745", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938758", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938758"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIIHYR98S/@@download/4DNFIIHYR98S.fastq.gz", "uuid": "e6d98768-fc3c-42b4-b07f-d1d5b57b8745", "file_type_detailed": "reads (fastq)", "upload_key": "e6d98768-fc3c-42b4-b07f-d1d5b57b8745/4DNFIIHYR98S.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938758"], "file_type": "reads", "accession": "4DNFIIHYR98S", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIIHYR98S/", "file_size": 339042561, "display_title": "4DNFIIHYR98S.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIIHYR98S/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/a5b503fb-75c7-4e95-a474-08621c75d454/", "uuid": "a5b503fb-75c7-4e95-a474-08621c75d454", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFI3EYLXFZ", "display_title": "4DNFI3EYLXFZ.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFI3EYLXFZ/", "uuid": "55769847-c5cd-4c04-8764-7b6c657b7e45", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938758", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938758"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIZWONLXD/@@download/4DNFIZWONLXD.fastq.gz", "uuid": "81c3cf25-ac40-4507-a9ce-0fa01b4c384a", "file_type_detailed": "reads (fastq)", "upload_key": "81c3cf25-ac40-4507-a9ce-0fa01b4c384a/4DNFIZWONLXD.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938759"], "file_type": "reads", "accession": "4DNFIZWONLXD", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIZWONLXD/", "file_size": 409151343, "display_title": "4DNFIZWONLXD.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIZWONLXD/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/53ef12e8-232f-4bcb-a697-bb2d5a6d63d2/", "uuid": "53ef12e8-232f-4bcb-a697-bb2d5a6d63d2", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFI4J67NHG", "display_title": "4DNFI4J67NHG.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFI4J67NHG/", "uuid": "501d44ac-d5e5-4b6c-9a98-c3b3d0940b1b", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938759", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938759"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFI4J67NHG/@@download/4DNFI4J67NHG.fastq.gz", "uuid": "501d44ac-d5e5-4b6c-9a98-c3b3d0940b1b", "file_type_detailed": "reads (fastq)", "upload_key": "501d44ac-d5e5-4b6c-9a98-c3b3d0940b1b/4DNFI4J67NHG.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938759"], "file_type": "reads", "accession": "4DNFI4J67NHG", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFI4J67NHG/", "file_size": 342586075, "display_title": "4DNFI4J67NHG.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI4J67NHG/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/d1c52180-94e2-4cc0-8e3a-298e054ff366/", "uuid": "d1c52180-94e2-4cc0-8e3a-298e054ff366", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIZWONLXD", "display_title": "4DNFIZWONLXD.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFIZWONLXD/", "uuid": "81c3cf25-ac40-4507-a9ce-0fa01b4c384a", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938759", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938759"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIRX5NQUR/@@download/4DNFIRX5NQUR.fastq.gz", "uuid": "e0f7cb1e-4dfb-471e-a86a-c0d653223b13", "file_type_detailed": "reads (fastq)", "upload_key": "e0f7cb1e-4dfb-471e-a86a-c0d653223b13/4DNFIRX5NQUR.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938760"], "file_type": "reads", "accession": "4DNFIRX5NQUR", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIRX5NQUR/", "file_size": 404346874, "display_title": "4DNFIRX5NQUR.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIRX5NQUR/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/0a7c4136-d886-4058-b41c-113551e1859a/", "uuid": "0a7c4136-d886-4058-b41c-113551e1859a", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFI6MOVDUW", "display_title": "4DNFI6MOVDUW.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFI6MOVDUW/", "uuid": "0d8a6918-dd4d-4ca9-842a-ef5691911572", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938760", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938760"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFI6MOVDUW/@@download/4DNFI6MOVDUW.fastq.gz", "uuid": "0d8a6918-dd4d-4ca9-842a-ef5691911572", "file_type_detailed": "reads (fastq)", "upload_key": "0d8a6918-dd4d-4ca9-842a-ef5691911572/4DNFI6MOVDUW.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938760"], "file_type": "reads", "accession": "4DNFI6MOVDUW", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFI6MOVDUW/", "file_size": 340293408, "display_title": "4DNFI6MOVDUW.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI6MOVDUW/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/8b123044-a989-48ba-8465-4ea183926fd8/", "uuid": "8b123044-a989-48ba-8465-4ea183926fd8", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIRX5NQUR", "display_title": "4DNFIRX5NQUR.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFIRX5NQUR/", "uuid": "e0f7cb1e-4dfb-471e-a86a-c0d653223b13", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938760", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938760"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFI8AWL9MT/@@download/4DNFI8AWL9MT.fastq.gz", "uuid": "a1fe75a1-e0b2-48eb-be42-3e4d7667fb51", "file_type_detailed": "reads (fastq)", "upload_key": "a1fe75a1-e0b2-48eb-be42-3e4d7667fb51/4DNFI8AWL9MT.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938761"], "file_type": "reads", "accession": "4DNFI8AWL9MT", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFI8AWL9MT/", "file_size": 382948917, "display_title": "4DNFI8AWL9MT.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI8AWL9MT/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/4eaa9975-4a98-4558-94fc-df3112bfdf58/", "uuid": "4eaa9975-4a98-4558-94fc-df3112bfdf58", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFITISVE2Y", "display_title": "4DNFITISVE2Y.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFITISVE2Y/", "uuid": "3e1fe927-c8c7-4afc-afc2-fb505ad24e5e", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938761", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938761"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFITISVE2Y/@@download/4DNFITISVE2Y.fastq.gz", "uuid": "3e1fe927-c8c7-4afc-afc2-fb505ad24e5e", "file_type_detailed": "reads (fastq)", "upload_key": "3e1fe927-c8c7-4afc-afc2-fb505ad24e5e/4DNFITISVE2Y.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938761"], "file_type": "reads", "accession": "4DNFITISVE2Y", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFITISVE2Y/", "file_size": 364136929, "display_title": "4DNFITISVE2Y.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFITISVE2Y/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/00457441-a14d-4d6d-b8ce-582504a079cd/", "uuid": "00457441-a14d-4d6d-b8ce-582504a079cd", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFI8AWL9MT", "display_title": "4DNFI8AWL9MT.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFI8AWL9MT/", "uuid": "a1fe75a1-e0b2-48eb-be42-3e4d7667fb51", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938761", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938761"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIGCJYKPV/@@download/4DNFIGCJYKPV.fastq.gz", "uuid": "35d5bf74-9cc6-42c9-a004-cca649a3b807", "file_type_detailed": "reads (fastq)", "upload_key": "35d5bf74-9cc6-42c9-a004-cca649a3b807/4DNFIGCJYKPV.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938762"], "file_type": "reads", "accession": "4DNFIGCJYKPV", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIGCJYKPV/", "file_size": 407955880, "display_title": "4DNFIGCJYKPV.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIGCJYKPV/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/546f7750-7f48-4bb3-8550-d42b41adb7e1/", "uuid": "546f7750-7f48-4bb3-8550-d42b41adb7e1", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIMHXZ9N5", "display_title": "4DNFIMHXZ9N5.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFIMHXZ9N5/", "uuid": "22a418d8-878a-4932-b794-a12a8e3b33eb", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938762", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938762"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIMHXZ9N5/@@download/4DNFIMHXZ9N5.fastq.gz", "uuid": "22a418d8-878a-4932-b794-a12a8e3b33eb", "file_type_detailed": "reads (fastq)", "upload_key": "22a418d8-878a-4932-b794-a12a8e3b33eb/4DNFIMHXZ9N5.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938762"], "file_type": "reads", "accession": "4DNFIMHXZ9N5", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIMHXZ9N5/", "file_size": 345290586, "display_title": "4DNFIMHXZ9N5.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIMHXZ9N5/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/9fc16a0f-b172-4cab-a205-d575649e7358/", "uuid": "9fc16a0f-b172-4cab-a205-d575649e7358", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIGCJYKPV", "display_title": "4DNFIGCJYKPV.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFIGCJYKPV/", "uuid": "35d5bf74-9cc6-42c9-a004-cca649a3b807", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938762", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938762"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIX59T8IM/@@download/4DNFIX59T8IM.fastq.gz", "uuid": "1768c2a9-34d3-4fd7-8164-49d643675ea6", "file_type_detailed": "reads (fastq)", "upload_key": "1768c2a9-34d3-4fd7-8164-49d643675ea6/4DNFIX59T8IM.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938763"], "file_type": "reads", "accession": "4DNFIX59T8IM", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIX59T8IM/", "file_size": 387145969, "display_title": "4DNFIX59T8IM.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIX59T8IM/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/527d72ef-36dc-4aff-a8e1-b2f50647ea3a/", "uuid": "527d72ef-36dc-4aff-a8e1-b2f50647ea3a", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIORC2I4Z", "display_title": "4DNFIORC2I4Z.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFIORC2I4Z/", "uuid": "66d10383-5a4f-4779-bda5-14628125e938", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938763", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938763"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIORC2I4Z/@@download/4DNFIORC2I4Z.fastq.gz", "uuid": "66d10383-5a4f-4779-bda5-14628125e938", "file_type_detailed": "reads (fastq)", "upload_key": "66d10383-5a4f-4779-bda5-14628125e938/4DNFIORC2I4Z.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938763"], "file_type": "reads", "accession": "4DNFIORC2I4Z", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIORC2I4Z/", "file_size": 371844599, "display_title": "4DNFIORC2I4Z.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIORC2I4Z/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/9e66ec2a-eeca-453e-851e-55ae930a6de6/", "uuid": "9e66ec2a-eeca-453e-851e-55ae930a6de6", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIX59T8IM", "display_title": "4DNFIX59T8IM.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFIX59T8IM/", "uuid": "1768c2a9-34d3-4fd7-8164-49d643675ea6", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938763", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938763"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFI1L8HL1F/@@download/4DNFI1L8HL1F.fastq.gz", "uuid": "c7efb2d5-1479-4a23-9ec0-529e2da5d599", "file_type_detailed": "reads (fastq)", "upload_key": "c7efb2d5-1479-4a23-9ec0-529e2da5d599/4DNFI1L8HL1F.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938764"], "file_type": "reads", "accession": "4DNFI1L8HL1F", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFI1L8HL1F/", "file_size": 411983476, "display_title": "4DNFI1L8HL1F.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI1L8HL1F/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/3d4cf3e8-aaae-4ebd-96dd-b25af346a0de/", "uuid": "3d4cf3e8-aaae-4ebd-96dd-b25af346a0de", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIDM3MHLZ", "display_title": "4DNFIDM3MHLZ.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFIDM3MHLZ/", "uuid": "7df28cc2-d0cb-4358-b9a2-70fdd572c083", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938764", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938764"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIDM3MHLZ/@@download/4DNFIDM3MHLZ.fastq.gz", "uuid": "7df28cc2-d0cb-4358-b9a2-70fdd572c083", "file_type_detailed": "reads (fastq)", "upload_key": "7df28cc2-d0cb-4358-b9a2-70fdd572c083/4DNFIDM3MHLZ.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938764"], "file_type": "reads", "accession": "4DNFIDM3MHLZ", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIDM3MHLZ/", "file_size": 355863846, "display_title": "4DNFIDM3MHLZ.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIDM3MHLZ/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/26bc17a6-15bd-4687-99f9-8754519b6bf6/", "uuid": "26bc17a6-15bd-4687-99f9-8754519b6bf6", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFI1L8HL1F", "display_title": "4DNFI1L8HL1F.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFI1L8HL1F/", "uuid": "c7efb2d5-1479-4a23-9ec0-529e2da5d599", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938764", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938764"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIU4ZSWTP/@@download/4DNFIU4ZSWTP.fastq.gz", "uuid": "98c01909-987d-441f-99ff-b552648a2a83", "file_type_detailed": "reads (fastq)", "upload_key": "98c01909-987d-441f-99ff-b552648a2a83/4DNFIU4ZSWTP.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938765"], "file_type": "reads", "accession": "4DNFIU4ZSWTP", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIU4ZSWTP/", "file_size": 63840606, "display_title": "4DNFIU4ZSWTP.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 610718, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIU4ZSWTP/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/64ce278a-4e98-493a-90f6-2a6a50b72126/", "uuid": "64ce278a-4e98-493a-90f6-2a6a50b72126", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIBWBYX1U", "display_title": "4DNFIBWBYX1U.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFIBWBYX1U/", "uuid": "49e51405-2d67-43b9-b37f-bf0637914350", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938765", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938765"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIBWBYX1U/@@download/4DNFIBWBYX1U.fastq.gz", "uuid": "49e51405-2d67-43b9-b37f-bf0637914350", "file_type_detailed": "reads (fastq)", "upload_key": "49e51405-2d67-43b9-b37f-bf0637914350/4DNFIBWBYX1U.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938765"], "file_type": "reads", "accession": "4DNFIBWBYX1U", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIBWBYX1U/", "file_size": 55946164, "display_title": "4DNFIBWBYX1U.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 610718, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIBWBYX1U/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/7bd9e7d5-2a80-46d0-8583-2d1e81ea6a0c/", "uuid": "7bd9e7d5-2a80-46d0-8583-2d1e81ea6a0c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIU4ZSWTP", "display_title": "4DNFIU4ZSWTP.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFIU4ZSWTP/", "uuid": "98c01909-987d-441f-99ff-b552648a2a83", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938765", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938765"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIICSX1BD/@@download/4DNFIICSX1BD.fastq.gz", "uuid": "cc695395-e4fe-40ea-a95c-483c74b80377", "file_type_detailed": "reads (fastq)", "upload_key": "cc695395-e4fe-40ea-a95c-483c74b80377/4DNFIICSX1BD.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938767"], "file_type": "reads", "accession": "4DNFIICSX1BD", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIICSX1BD/", "file_size": 412087919, "display_title": "4DNFIICSX1BD.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIICSX1BD/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/be1fab1f-c783-47c2-83df-0b7281387a18/", "uuid": "be1fab1f-c783-47c2-83df-0b7281387a18", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIUBJR9PH", "display_title": "4DNFIUBJR9PH.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFIUBJR9PH/", "uuid": "cffa5d37-a8e8-4b20-b185-2401acf55216", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938767", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938767"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIUBJR9PH/@@download/4DNFIUBJR9PH.fastq.gz", "uuid": "cffa5d37-a8e8-4b20-b185-2401acf55216", "file_type_detailed": "reads (fastq)", "upload_key": "cffa5d37-a8e8-4b20-b185-2401acf55216/4DNFIUBJR9PH.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938767"], "file_type": "reads", "accession": "4DNFIUBJR9PH", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIUBJR9PH/", "file_size": 349925655, "display_title": "4DNFIUBJR9PH.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIUBJR9PH/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/6ef38e1b-7cdf-4f7f-9f20-cb89d0e985f6/", "uuid": "6ef38e1b-7cdf-4f7f-9f20-cb89d0e985f6", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIICSX1BD", "display_title": "4DNFIICSX1BD.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFIICSX1BD/", "uuid": "cc695395-e4fe-40ea-a95c-483c74b80377", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938767", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938767"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFI13WM7NK/@@download/4DNFI13WM7NK.fastq.gz", "uuid": "fd0a5302-ba33-497f-858e-def8526eaa66", "file_type_detailed": "reads (fastq)", "upload_key": "fd0a5302-ba33-497f-858e-def8526eaa66/4DNFI13WM7NK.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938768"], "file_type": "reads", "accession": "4DNFI13WM7NK", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFI13WM7NK/", "file_size": 390754946, "display_title": "4DNFI13WM7NK.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI13WM7NK/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/09a4e347-8d59-4256-ab25-ae994f5deb62/", "uuid": "09a4e347-8d59-4256-ab25-ae994f5deb62", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFITQGWIBP", "display_title": "4DNFITQGWIBP.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFITQGWIBP/", "uuid": "eb7976ee-cd88-433a-956c-799b0a6aac5b", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938768", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938768"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFITQGWIBP/@@download/4DNFITQGWIBP.fastq.gz", "uuid": "eb7976ee-cd88-433a-956c-799b0a6aac5b", "file_type_detailed": "reads (fastq)", "upload_key": "eb7976ee-cd88-433a-956c-799b0a6aac5b/4DNFITQGWIBP.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938768"], "file_type": "reads", "accession": "4DNFITQGWIBP", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFITQGWIBP/", "file_size": 354668283, "display_title": "4DNFITQGWIBP.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFITQGWIBP/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/b115da18-35ea-4f8b-a91a-2d0d1854d454/", "uuid": "b115da18-35ea-4f8b-a91a-2d0d1854d454", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFI13WM7NK", "display_title": "4DNFI13WM7NK.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFI13WM7NK/", "uuid": "fd0a5302-ba33-497f-858e-def8526eaa66", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938768", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938768"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIDZ85T1W/@@download/4DNFIDZ85T1W.fastq.gz", "uuid": "a49d8f49-dde6-4e76-bce8-c097ee16f99f", "file_type_detailed": "reads (fastq)", "upload_key": "a49d8f49-dde6-4e76-bce8-c097ee16f99f/4DNFIDZ85T1W.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938769"], "file_type": "reads", "accession": "4DNFIDZ85T1W", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIDZ85T1W/", "file_size": 389329158, "display_title": "4DNFIDZ85T1W.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIDZ85T1W/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/e6f4951c-6b01-44df-8ec4-366ffcefae08/", "uuid": "e6f4951c-6b01-44df-8ec4-366ffcefae08", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFILSEPSKO", "display_title": "4DNFILSEPSKO.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFILSEPSKO/", "uuid": "b5fb786c-f1e8-49ad-be3c-84cfb28b1028", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938769", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938769"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFILSEPSKO/@@download/4DNFILSEPSKO.fastq.gz", "uuid": "b5fb786c-f1e8-49ad-be3c-84cfb28b1028", "file_type_detailed": "reads (fastq)", "upload_key": "b5fb786c-f1e8-49ad-be3c-84cfb28b1028/4DNFILSEPSKO.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938769"], "file_type": "reads", "accession": "4DNFILSEPSKO", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFILSEPSKO/", "file_size": 344038604, "display_title": "4DNFILSEPSKO.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFILSEPSKO/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/c6dbd2f2-be16-4492-957f-b4d1a06dce7c/", "uuid": "c6dbd2f2-be16-4492-957f-b4d1a06dce7c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIDZ85T1W", "display_title": "4DNFIDZ85T1W.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFIDZ85T1W/", "uuid": "a49d8f49-dde6-4e76-bce8-c097ee16f99f", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938769", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938769"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIS6CU8GB/@@download/4DNFIS6CU8GB.fastq.gz", "uuid": "0d41e779-c027-4463-88cc-c5fc5b4ae074", "file_type_detailed": "reads (fastq)", "upload_key": "0d41e779-c027-4463-88cc-c5fc5b4ae074/4DNFIS6CU8GB.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938770"], "file_type": "reads", "accession": "4DNFIS6CU8GB", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIS6CU8GB/", "file_size": 409537602, "display_title": "4DNFIS6CU8GB.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIS6CU8GB/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/b7ed1830-2b4e-4ef1-b63f-ae9122f98619/", "uuid": "b7ed1830-2b4e-4ef1-b63f-ae9122f98619", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFI9LOA8QR", "display_title": "4DNFI9LOA8QR.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFI9LOA8QR/", "uuid": "dcb88111-a17b-49ce-89c5-913aa49fa5a2", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938770", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938770"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFI9LOA8QR/@@download/4DNFI9LOA8QR.fastq.gz", "uuid": "dcb88111-a17b-49ce-89c5-913aa49fa5a2", "file_type_detailed": "reads (fastq)", "upload_key": "dcb88111-a17b-49ce-89c5-913aa49fa5a2/4DNFI9LOA8QR.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938770"], "file_type": "reads", "accession": "4DNFI9LOA8QR", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFI9LOA8QR/", "file_size": 338789796, "display_title": "4DNFI9LOA8QR.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI9LOA8QR/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/c2b9e78f-7e30-4ee9-91ed-a0a366ea35d8/", "uuid": "c2b9e78f-7e30-4ee9-91ed-a0a366ea35d8", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIS6CU8GB", "display_title": "4DNFIS6CU8GB.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFIS6CU8GB/", "uuid": "0d41e779-c027-4463-88cc-c5fc5b4ae074", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938770", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938770"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFI86ZJCB2/@@download/4DNFI86ZJCB2.fastq.gz", "uuid": "9bbab525-0f77-450b-9cba-583b40fb61a3", "file_type_detailed": "reads (fastq)", "upload_key": "9bbab525-0f77-450b-9cba-583b40fb61a3/4DNFI86ZJCB2.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938753"], "file_type": "reads", "accession": "4DNFI86ZJCB2", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFI86ZJCB2/", "file_size": 384620323, "display_title": "4DNFI86ZJCB2.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI86ZJCB2/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/f0fc5067-f42f-4b0a-879f-a9620bd8d979/", "uuid": "f0fc5067-f42f-4b0a-879f-a9620bd8d979", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFIZP51S4E", "display_title": "4DNFIZP51S4E.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFIZP51S4E/", "uuid": "b2a32b88-d967-415f-9570-dcde7761518f", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938753", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938753"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFIZP51S4E/@@download/4DNFIZP51S4E.fastq.gz", "uuid": "b2a32b88-d967-415f-9570-dcde7761518f", "file_type_detailed": "reads (fastq)", "upload_key": "b2a32b88-d967-415f-9570-dcde7761518f/4DNFIZP51S4E.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938753"], "file_type": "reads", "accession": "4DNFIZP51S4E", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFIZP51S4E/", "file_size": 364880424, "display_title": "4DNFIZP51S4E.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIZP51S4E/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/28c1f495-4371-43bf-9803-690aa5f38e0a/", "uuid": "28c1f495-4371-43bf-9803-690aa5f38e0a", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFI86ZJCB2", "display_title": "4DNFI86ZJCB2.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFI86ZJCB2/", "uuid": "9bbab525-0f77-450b-9cba-583b40fb61a3", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938753", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938753"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFISWH64E4/@@download/4DNFISWH64E4.fastq.gz", "uuid": "7453a78d-57bf-41d4-927d-8d753c92343d", "file_type_detailed": "reads (fastq)", "upload_key": "7453a78d-57bf-41d4-927d-8d753c92343d/4DNFISWH64E4.fastq.gz", "paired_end": "1", "dbxrefs": ["SRA:SRR5938766"], "file_type": "reads", "accession": "4DNFISWH64E4", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFISWH64E4/", "file_size": 388263288, "display_title": "4DNFISWH64E4.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFISWH64E4/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/5061b1a3-0dbe-4538-bbad-4540b3479c72/", "uuid": "5061b1a3-0dbe-4538-bbad-4540b3479c72", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFI2U7DYWJ", "display_title": "4DNFI2U7DYWJ.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "2", "@id": "/files-fastq/4DNFI2U7DYWJ/", "uuid": "eb5888db-c10a-4cce-945c-aed386eff6e8", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938766", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938766"}]}, {"file_classification": "raw file", "status": "released", "href": "/files-fastq/4DNFI2U7DYWJ/@@download/4DNFI2U7DYWJ.fastq.gz", "uuid": "eb5888db-c10a-4cce-945c-aed386eff6e8", "file_type_detailed": "reads (fastq)", "upload_key": "eb5888db-c10a-4cce-945c-aed386eff6e8/4DNFI2U7DYWJ.fastq.gz", "paired_end": "2", "dbxrefs": ["SRA:SRR5938766"], "file_type": "reads", "accession": "4DNFI2U7DYWJ", "@type": ["FileFastq", "File", "Item"], "@id": "/files-fastq/4DNFI2U7DYWJ/", "file_size": 345879500, "display_title": "4DNFI2U7DYWJ.fastq.gz", "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "Total Sequences": 4000000, "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI2U7DYWJ/fastqc_report.html", "Sequence length": "100", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "@id": "/quality-metrics-fastqc/528d3f7f-0b9e-4c88-b701-5f1cbf27d903/", "uuid": "528d3f7f-0b9e-4c88-b701-5f1cbf27d903", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"accession": "4DNFISWH64E4", "display_title": "4DNFISWH64E4.fastq.gz", "file_type_detailed": "reads (fastq)", "file_type": "reads", "paired_end": "1", "@id": "/files-fastq/4DNFISWH64E4/", "uuid": "7453a78d-57bf-41d4-927d-8d753c92343d", "@type": ["FileFastq", "File", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"file_format": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938766", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938766"}]}], "status": "released", "aliases": ["4dn-dcic-lab:GSM2745847"], "dbxrefs": ["GEO:GSM2745847"], "protocol": {"status": "released", "uuid": "e89ce7e7-92ba-4af4-b910-74b269c0e845", "@id": "/protocols/e89ce7e7-92ba-4af4-b910-74b269c0e845/", "@type": ["Protocol", "Item"], "display_title": "GSE102740_hic_protocol.pdf", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "accession": "4DNEX3PXTY7I", "biosample": {"modifications_summary": "None", "@id": "/biosamples/4DNBSYQXJPGY/", "accession": "4DNBSYQXJPGY", "treatments_summary": "1NM-PP1 treatment (2.0 \u03bcM, 10.0h)", "biosource_summary": "DT40 with random integration of X. laevis Cdk1, CDK1 disruption", "display_title": "4DNBSYQXJPGY", "uuid": "a575cbfa-059a-4e01-9bf1-b65646898881", "@type": ["Biosample", "Item"], "status": "released", "biosample_type": "immortalized cells", "biosource": [{"lab": {"uuid": "3c577664-affb-41c4-bf27-9e21c2fc1554", "status": "current", "display_title": "Job Dekker, UMMS", "@type": ["Lab", "Item"], "@id": "/labs/job-dekker-lab/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin", "role.lab_submitter", "submits_for.3c577664-affb-41c4-bf27-9e21c2fc1554"]}}, "award": {"uuid": "12a92962-8265-4fc0-b2f8-cf14f05db58b", "status": "current", "@type": ["Award", "Item"], "@id": "/awards/external-award/", "display_title": "EXTERNAL AWARD", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "status": "released", "tissue": {"status": "released", "term_id": "UBERON:0003903", "uuid": "1bfd1088-3311-4711-8c41-83dbed3db972", "display_title": "bursa of Fabricius", "@id": "/ontology-terms/UBERON:0003903/", "@type": ["OntologyTerm", "Item"], "preferred_name": "bursa of Fabricius", "slim_terms": [{"status": "released", "display_title": "digestive system", "@type": ["OntologyTerm", "Item"], "@id": "/ontology-terms/UBERON:0001007/", "uuid": "111129bc-8535-4448-903e-854af460a233", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"status": "released", "display_title": "mesoderm", "@type": ["OntologyTerm", "Item"], "@id": "/ontology-terms/UBERON:0000926/", "uuid": "111120bc-8535-4448-903e-854af460a233", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "term_name": "bursa of Fabricius", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "aliases": ["4dn-dcic-lab:DT40-Cdk1as"], "accession": "4DNSRFB455CY", "cell_line": {"@id": "/ontology-terms/EFO:0006274/", "status": "released", "uuid": "fd057734-0765-4007-b7eb-d71ac7cbef65", "display_title": "DT40", "@type": ["OntologyTerm", "Item"], "slim_terms": [{"@id": "/ontology-terms/GO:0005623/", "display_title": "cell", "@type": ["OntologyTerm", "Item"], "uuid": "72e16a19-eef3-46ca-a1b8-20e646e69675", "status": "current", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@id": "/ontology-terms/CL:0000000/", "display_title": "cell", "@type": ["OntologyTerm", "Item"], "uuid": "45d2b02e-130b-40db-8bf2-2288c6c57dcf", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "term_name": "DT40", "term_id": "EFO:0006274", "preferred_name": "DT40", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "individual": {"@type": ["IndividualChicken", "Individual", "Item"], "@id": "/individuals-chicken/4DNINYWTTO3D/", "uuid": "836856fd-a0f7-4daf-afb2-4a098df8e8fc", "status": "released", "display_title": "4DNINYWTTO3D", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "description": "DT40 line expressing Cdk1as transgene, which renders it sensitive to inhibition by 1NM-PP1", "date_created": "2018-10-30T15:04:12.407677+00:00", "submitted_by": {"error": "no view permissions"}, "last_modified": {"modified_by": {"error": "no view permissions"}, "date_modified": "2019-10-11T22:24:13.955875+00:00"}, "modifications": [{"uuid": "4dca1ddb-ab74-44f5-ac84-738b0198886d", "display_title": "random integration of X. laevis Cdk1", "@type": ["Modification", "Item"], "@id": "/modifications/4dca1ddb-ab74-44f5-ac84-738b0198886d/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "fb27fdf6-4199-4179-8bb0-6101b1404aee", "display_title": "Crispr disruption for CDK1 chicken gene", "@type": ["Modification", "Item"], "@id": "/modifications/fb27fdf6-4199-4179-8bb0-6101b1404aee/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "biosource_type": "immortalized cell line", "cell_line_tier": "Unclassified", "public_release": "2019-10-11", "schema_version": "2", "project_release": "2019-10-11", "@id": "/biosources/4DNSRFB455CY/", "@type": ["Biosource", "Item"], "uuid": "bdb9d92e-1f52-4e84-a484-78e595791e5e", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "display_title": "DT40 with random integration of X. laevis Cdk1, CDK1 disruption - 4DNSRFB455CY", "external_references": [], "biosource_name": "DT40 with random integration of X. laevis Cdk1, CDK1 disruption", "biosource_category": ["Other"], "organism": {"uuid": "fed8c206-762f-497f-821b-1c8ff7900bd2", "@id": "/organisms/9031/", "status": "released", "@type": ["Organism", "Item"], "display_title": "G. gallus", "name": "chicken", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "badges": [{"messages": ["Biosample missing Cell Culture Details"], "badge": {"warning": "Biosample Metadata Incomplete", "badge_classification": "Warning", "title": "Biosample Metadata Incomplete", "display_title": "Biosample Metadata Incomplete", "badge_icon": "/static/img/badges/biosample-icon.svg", "@id": "/badges/biosample-metadata-incomplete/", "@type": ["Badge", "Item"], "description": "Biosample is missing metadata information required as part of the standards implemented by the 4DN Samples working group.", "uuid": "2b2cc7ff-b7a8-4138-9a6c-22884fc71690", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "treatments": [{"@id": "/treatments-agent/6600f226-5817-4bb8-afb5-c412a7b39058/", "chemical": "1NM-PP1", "display_title": "1NM-PP1 treatment (2.0 \u03bcM, 10.0h)", "treatment_type": "Chemical", "duration": 10.0, "@type": ["TreatmentAgent", "Treatment", "Item"], "uuid": "6600f226-5817-4bb8-afb5-c412a7b39058", "description": "Synchronization with 1NM-PP1 fo 10 hours", "concentration_units": "\u03bcM", "status": "released", "concentration": 2.0, "duration_units": "hour", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "description": "20150609-5m-R1_", "sop_mapping": {"has_sop": "No"}, "date_created": "2018-10-30T15:05:09.617302+00:00", "submitted_by": {"error": "no view permissions"}, "last_modified": {"modified_by": {"error": "no view permissions"}, "date_modified": "2019-10-11T20:55:31.414336+00:00"}, "ligation_time": 240.0, "biotin_removed": "Yes", "digestion_time": 960.0, "public_release": "2019-10-11", "schema_version": "2", "tagging_method": "biotin-dCTP", "experiment_type": {"display_title": "Dilution Hi-C", "experiment_category": "Sequencing", "uuid": "832b7989-69ab-4bb6-97b9-195d5dd965ea", "status": "released", "title": "Dilution Hi-C", "@id": "/experiment-types/dilution-hi-c/", "@type": ["ExperimentType", "Item"], "assay_subclass_short": "Hi-C", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "processed_files": [{"accession": "4DNFI9UPCXAT", "file_size": 41438412054, "open_data_url": "https://4dn-open-data-public.s3.amazonaws.com/fourfront-webprod/wfoutput/7399b431-af16-49b3-9c1e-fd246be99d9c/4DNFI9UPCXAT.bam", "display_title": "4DNFI9UPCXAT.bam", "file_format": {"uuid": "d13d06cf-218e-4f61-aaf0-91f226248b3c", "file_format": "bam", "status": "released", "@id": "/file-formats/bam/", "@type": ["FileFormat", "Item"], "display_title": "bam", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "href": "/files-processed/4DNFI9UPCXAT/@@download/4DNFI9UPCXAT.bam", "status": "released", "@id": "/files-processed/4DNFI9UPCXAT/", "@type": ["FileProcessed", "File", "Item"], "file_type": "alignments", "file_type_detailed": "alignments (bam)", "uuid": "7399b431-af16-49b3-9c1e-fd246be99d9c", "file_classification": "processed file", "upload_key": "7399b431-af16-49b3-9c1e-fd246be99d9c/4DNFI9UPCXAT.bam", "quality_metric": {"uuid": "2f9c4150-e936-4819-9d32-249af86198b3", "overall_quality_status": "PASS", "@type": ["QualityMetricBamqc", "QualityMetric", "Item"], "@id": "/quality-metrics-bamqc/2f9c4150-e936-4819-9d32-249af86198b3/", "display_title": "QualityMetricBamqc from 2020-01-16", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "quality_metric_summary": [{"title": "Total Reads", "value": "176610718", "numberType": "integer"}, {"title": "Unmapped Reads", "value": "12.821", "tooltip": "Percent of total reads (=22.64m)", "numberType": "percent"}, {"title": "Multimapped Reads", "value": "7.864", "tooltip": "Percent of total reads (=13.89m)", "numberType": "percent"}, {"title": "Duplicate Reads", "value": "9.691", "tooltip": "Percent of total reads (=17.12m)", "numberType": "percent"}, {"title": "Walks", "value": "4.465", "tooltip": "Percent of total reads (=7.88m)", "numberType": "percent"}, {"title": "Minor Contigs", "value": "0.514", "tooltip": "Percent of total reads (=0.91m)", "numberType": "percent"}]}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "external_references": [], "track_and_facet_info": {"experimental_lab": "Job Dekker, UMMS", "experiment_type": "Dilution Hi-C", "experiment_bucket": "processed file", "assay_info": "HindIII", "dataset": "HiC on sync. chicken cells", "condition": "prophase (5m)", "replicate_info": "Biorep 1, Techrep 1", "biosource_name": "DT40 with random integration of X. laevis Cdk1, CDK1 disruption", "lab_name": "4DN DCIC, HMS"}}, {"accession": "4DNFI4I26Q37", "file_size": 2098409690, "open_data_url": "https://4dn-open-data-public.s3.amazonaws.com/fourfront-webprod/wfoutput/bdb124a6-6b82-4dcb-b20f-54306d9e02f4/4DNFI4I26Q37.pairs.gz", "display_title": "4DNFI4I26Q37.pairs.gz", "file_format": {"uuid": "d13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "pairs", "status": "released", "@id": "/file-formats/pairs/", "@type": ["FileFormat", "Item"], "display_title": "pairs", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "href": "/files-processed/4DNFI4I26Q37/@@download/4DNFI4I26Q37.pairs.gz", "status": "released", "@id": "/files-processed/4DNFI4I26Q37/", "@type": ["FileProcessed", "File", "Item"], "file_type": "contact list-replicate", "file_type_detailed": "contact list-replicate (pairs)", "uuid": "bdb124a6-6b82-4dcb-b20f-54306d9e02f4", "file_classification": "processed file", "upload_key": "bdb124a6-6b82-4dcb-b20f-54306d9e02f4/4DNFI4I26Q37.pairs.gz", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI4I26Q37/pairsqc_report.html", "uuid": "dbe7c524-e881-488c-a42a-d4031a5f98f0", "overall_quality_status": "PASS", "@type": ["QualityMetricPairsqc", "QualityMetric", "Item"], "@id": "/quality-metrics-pairsqc/dbe7c524-e881-488c-a42a-d4031a5f98f0/", "Total reads": 115078651, "display_title": "QualityMetricPairsqc from 2019-02-11", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "quality_metric_summary": [{"title": "Filtered Reads", "value": "115078651", "numberType": "integer"}, {"title": "Cis reads (>20kb)", "value": "51.11", "tooltip": "Percent of filtered reads (=58.82m)", "numberType": "percent"}, {"title": "Short cis reads", "value": "31.5", "tooltip": "Percent of filtered reads (=36.25m)", "numberType": "percent"}, {"title": "Trans Reads", "value": "17.39", "tooltip": "Percent of filtered reads (=20.01m)", "numberType": "percent"}]}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "external_references": [], "track_and_facet_info": {"experimental_lab": "Job Dekker, UMMS", "experiment_type": "Dilution Hi-C", "experiment_bucket": "processed file", "assay_info": "HindIII", "dataset": "HiC on sync. chicken cells", "condition": "prophase (5m)", "replicate_info": "Biorep 1, Techrep 1", "biosource_name": "DT40 with random integration of X. laevis Cdk1, CDK1 disruption", "lab_name": "4DN DCIC, HMS"}}], "project_release": "2019-10-11", "digestion_enzyme": {"name": "HindIII", "uuid": "2ace2f00-c913-4bac-a6ef-0b316bc2108e", "display_title": "HindIII", "status": "released", "@id": "/enzymes/HindIII/", "@type": ["Enzyme", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "crosslinking_time": 10.0, "biosample_quantity": 13000000.0, "crosslinking_method": "1% Formaldehyde", "fragment_size_range": "150-350", "fragmentation_method": "sonication", "ligation_temperature": 16.0, "digestion_temperature": 37.0, "biosample_quantity_units": "cells", "crosslinking_temperature": 23.0, "library_preparation_date": "2015-06-09", "fragment_size_selection_method": "SPRI beads", "@id": "/experiments-hi-c/4DNEX3PXTY7I/", "@type": ["ExperimentHiC", "Experiment", "Item"], "uuid": "2c4368dd-d29c-4429-8a6e-2d23191c9669", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "display_title": "Dilution Hi-C on DT40 with random integration of X. laevis Cdk1, CDK1 disruption with HindIII - 4DNEX3PXTY7I", "external_references": [{"ref": "GEO:GSM2745847", "uri": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM2745847"}], "experiment_sets": [{"experimentset_type": "replicate", "uuid": "e1e79b5b-97c3-41b4-8150-50fda65da9f7", "accession": "4DNESNWWIFZU", "display_title": "4DNESNWWIFZU", "@type": ["ExperimentSetReplicate", "ExperimentSet", "Item"], "@id": "/experiment-set-replicates/4DNESNWWIFZU/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "produced_in_pub": {"display_title": "Gibcus JH et al. (2018) PMID:29348367", "uuid": "84fa5633-aac7-4cb3-b53b-0f0234ea06dd", "status": "current", "authors": ["Gibcus JH", "Samejima K", "Goloborodko A", "Samejima I", "Naumova N", "Nuebler J", "Kanemaki MT", "Xie L", "Paulson JR", "Earnshaw WC", "Mirny LA", "Dekker J"], "@type": ["Publication", "Item"], "abstract": "Mitotic chromosomes fold as compact arrays of chromatin loops. To identify the pathway of mitotic chromosome formation, we combined imaging and Hi-C analysis of synchronous DT40 cell cultures with polymer simulations. Here we show that in prophase, the interphase organization is rapidly lost in a condensin-dependent manner, and arrays of consecutive 60-kilobase (kb) loops are formed. During prometaphase, ~80-kb inner loops are nested within ~400-kb outer loops. The loop  array acquires a helical arrangement with consecutive loops emanating from a central \"spiral staircase\" condensin scaffold. The size of helical turns progressively increases to ~12 megabases during prometaphase. Acute depletion of  condensin I or II shows that nested loops form by differential action of the two  condensins, whereas condensin II is required for helical winding.", "@id": "/publications/84fa5633-aac7-4cb3-b53b-0f0234ea06dd/", "title": "A pathway for mitotic chromosome formation.", "short_attribution": "Gibcus JH et al. (2018)", "ID": "PMID:29348367", "date_published": "2018-02-09", "journal": "Science (New York, N.Y.)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "publications_of_exp": [{"status": "current", "@id": "/publications/84fa5633-aac7-4cb3-b53b-0f0234ea06dd/", "journal": "Science (New York, N.Y.)", "title": "A pathway for mitotic chromosome formation.", "date_published": "2018-02-09", "abstract": "Mitotic chromosomes fold as compact arrays of chromatin loops. To identify the pathway of mitotic chromosome formation, we combined imaging and Hi-C analysis of synchronous DT40 cell cultures with polymer simulations. Here we show that in prophase, the interphase organization is rapidly lost in a condensin-dependent manner, and arrays of consecutive 60-kilobase (kb) loops are formed. During prometaphase, ~80-kb inner loops are nested within ~400-kb outer loops. The loop  array acquires a helical arrangement with consecutive loops emanating from a central \"spiral staircase\" condensin scaffold. The size of helical turns progressively increases to ~12 megabases during prometaphase. Acute depletion of  condensin I or II shows that nested loops form by differential action of the two  condensins, whereas condensin II is required for helical winding.", "authors": ["Gibcus JH", "Samejima K", "Goloborodko A", "Samejima I", "Naumova N", "Nuebler J", "Kanemaki MT", "Xie L", "Paulson JR", "Earnshaw WC", "Mirny LA", "Dekker J"], "short_attribution": "Gibcus JH et al. (2018)", "uuid": "84fa5633-aac7-4cb3-b53b-0f0234ea06dd", "ID": "PMID:29348367", "@type": ["Publication", "Item"], "display_title": "Gibcus JH et al. (2018) PMID:29348367", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "experiment_categorizer": {"field": "Enzyme", "value": "HindIII", "combined": "Enzyme: HindIII"}, "experiment_summary": "Dilution Hi-C on DT40 with random integration of X. laevis Cdk1, CDK1 disruption with HindIII", "@context": "/terms/", "aggregated-items": {"badges": [{"parent": "/biosamples/4DNBSYQXJPGY/", "embedded_path": "biosample.badges", "item": {"messages": ["Biosample missing Cell Culture Details"], "badge": {"commendation": null, "warning": "Biosample Metadata Incomplete", "uuid": "2b2cc7ff-b7a8-4138-9a6c-22884fc71690", "@id": "/badges/biosample-metadata-incomplete/", "badge_icon": "/static/img/badges/biosample-icon.svg", "description": "Biosample is missing metadata information required as part of the standards implemented by the 4DN Samples working group."}}}]}, "validation-errors": []}