{"lab": {"display_title": "Job Dekker, UMMS", "@type": ["Lab", "Item"], "correspondence": [{"contact_email": "am9iLmRla2tlckB1bWFzc21lZC5lZHU=", "@id": "/users/83b5073a-069b-4162-9b30-6f42d5551e34/", "display_title": "Job Dekker"}], "title": "Job Dekker, UMMS", "status": "current", "@id": "/labs/job-dekker-lab/", "uuid": "3c577664-affb-41c4-bf27-9e21c2fc1554", "pi": {"error": "no view permissions"}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin", "role.lab_submitter", "submits_for.3c577664-affb-41c4-bf27-9e21c2fc1554"]}}, "award": {"name": "external-award", "project": "External", "@type": ["Award", "Item"], "center_title": "External", "@id": "/awards/external-award/", "uuid": "12a92962-8265-4fc0-b2f8-cf14f05db58b", "center": "External", "description": "Funding source is from outside 4DN.", "status": "current", "display_title": "EXTERNAL AWARD", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "files": [{"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIESEWO1F/@@download/4DNFIESEWO1F.fastq.gz", "accession": "4DNFIESEWO1F", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 405325644, "display_title": "4DNFIESEWO1F.fastq.gz", "uuid": "c6286663-0343-450d-9a9b-b71c170a3e41", "upload_key": "c6286663-0343-450d-9a9b-b71c170a3e41/4DNFIESEWO1F.fastq.gz", "dbxrefs": ["SRA:SRR5938706"], "@id": "/files-fastq/4DNFIESEWO1F/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "14d3c405-eca3-4e8a-9358-8a56ab61cc05", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-14", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIESEWO1F/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/14d3c405-eca3-4e8a-9358-8a56ab61cc05/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIJ2IHFGJ/", "file_type": "reads", "paired_end": "2", "accession": "4DNFIJ2IHFGJ", "display_title": "4DNFIJ2IHFGJ.fastq.gz", "uuid": "fccf6e2e-007a-4577-850a-3f72a29c6cad", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938706", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938706"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIJ2IHFGJ/@@download/4DNFIJ2IHFGJ.fastq.gz", "accession": "4DNFIJ2IHFGJ", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 360077701, "display_title": "4DNFIJ2IHFGJ.fastq.gz", "uuid": "fccf6e2e-007a-4577-850a-3f72a29c6cad", "upload_key": "fccf6e2e-007a-4577-850a-3f72a29c6cad/4DNFIJ2IHFGJ.fastq.gz", "dbxrefs": ["SRA:SRR5938706"], "@id": "/files-fastq/4DNFIJ2IHFGJ/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "d18710e2-d4b0-4d2b-893d-ba0fbeee2300", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIJ2IHFGJ/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/d18710e2-d4b0-4d2b-893d-ba0fbeee2300/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIESEWO1F/", "file_type": "reads", "paired_end": "1", "accession": "4DNFIESEWO1F", "display_title": "4DNFIESEWO1F.fastq.gz", "uuid": "c6286663-0343-450d-9a9b-b71c170a3e41", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938706", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938706"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFI9IFYIUY/@@download/4DNFI9IFYIUY.fastq.gz", "accession": "4DNFI9IFYIUY", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 404164369, "display_title": "4DNFI9IFYIUY.fastq.gz", "uuid": "7b22da13-8edc-488b-9880-f0af5be7dd55", "upload_key": "7b22da13-8edc-488b-9880-f0af5be7dd55/4DNFI9IFYIUY.fastq.gz", "dbxrefs": ["SRA:SRR5938702"], "@id": "/files-fastq/4DNFI9IFYIUY/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "36737c34-97f7-4520-8fa6-4dc0a7105bf9", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-14", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI9IFYIUY/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/36737c34-97f7-4520-8fa6-4dc0a7105bf9/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFI6FA3WRI/", "file_type": "reads", "paired_end": "2", "accession": "4DNFI6FA3WRI", "display_title": "4DNFI6FA3WRI.fastq.gz", "uuid": "c43ad13e-c9a6-4114-9180-254f2ab00cc4", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938702", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938702"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFI6FA3WRI/@@download/4DNFI6FA3WRI.fastq.gz", "accession": "4DNFI6FA3WRI", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 363294642, "display_title": "4DNFI6FA3WRI.fastq.gz", "uuid": "c43ad13e-c9a6-4114-9180-254f2ab00cc4", "upload_key": "c43ad13e-c9a6-4114-9180-254f2ab00cc4/4DNFI6FA3WRI.fastq.gz", "dbxrefs": ["SRA:SRR5938702"], "@id": "/files-fastq/4DNFI6FA3WRI/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "61cb6a69-513f-4b40-af7c-16cb5af851b4", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-14", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI6FA3WRI/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/61cb6a69-513f-4b40-af7c-16cb5af851b4/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFI9IFYIUY/", "file_type": "reads", "paired_end": "1", "accession": "4DNFI9IFYIUY", "display_title": "4DNFI9IFYIUY.fastq.gz", "uuid": "7b22da13-8edc-488b-9880-f0af5be7dd55", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938702", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938702"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIL8MQNCN/@@download/4DNFIL8MQNCN.fastq.gz", "accession": "4DNFIL8MQNCN", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 399522252, "display_title": "4DNFIL8MQNCN.fastq.gz", "uuid": "90663d63-7072-4fb7-b153-0c08e33be016", "upload_key": "90663d63-7072-4fb7-b153-0c08e33be016/4DNFIL8MQNCN.fastq.gz", "dbxrefs": ["SRA:SRR5938698"], "@id": "/files-fastq/4DNFIL8MQNCN/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "86c3de3f-ceb1-4fff-ad44-4d1197b6bf7c", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-19", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIL8MQNCN/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/86c3de3f-ceb1-4fff-ad44-4d1197b6bf7c/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIL5F2OHH/", "file_type": "reads", "paired_end": "2", "accession": "4DNFIL5F2OHH", "display_title": "4DNFIL5F2OHH.fastq.gz", "uuid": "f5e18a90-97ef-4f7c-ba9f-b4d3979b223d", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938698", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938698"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIL5F2OHH/@@download/4DNFIL5F2OHH.fastq.gz", "accession": "4DNFIL5F2OHH", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 350337359, "display_title": "4DNFIL5F2OHH.fastq.gz", "uuid": "f5e18a90-97ef-4f7c-ba9f-b4d3979b223d", "upload_key": "f5e18a90-97ef-4f7c-ba9f-b4d3979b223d/4DNFIL5F2OHH.fastq.gz", "dbxrefs": ["SRA:SRR5938698"], "@id": "/files-fastq/4DNFIL5F2OHH/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "ea724fc2-24e9-4713-9734-97be23cbfe85", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIL5F2OHH/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/ea724fc2-24e9-4713-9734-97be23cbfe85/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIL8MQNCN/", "file_type": "reads", "paired_end": "1", "accession": "4DNFIL8MQNCN", "display_title": "4DNFIL8MQNCN.fastq.gz", "uuid": "90663d63-7072-4fb7-b153-0c08e33be016", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938698", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938698"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIK97I8JI/@@download/4DNFIK97I8JI.fastq.gz", "accession": "4DNFIK97I8JI", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 386486566, "display_title": "4DNFIK97I8JI.fastq.gz", "uuid": "421c4de7-2d7a-4ee4-a512-18b823674feb", "upload_key": "421c4de7-2d7a-4ee4-a512-18b823674feb/4DNFIK97I8JI.fastq.gz", "dbxrefs": ["SRA:SRR5938697"], "@id": "/files-fastq/4DNFIK97I8JI/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "123cffcc-23c7-46cd-9ea9-e2dd1ebb5437", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-14", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIK97I8JI/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/123cffcc-23c7-46cd-9ea9-e2dd1ebb5437/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIJRW6NDP/", "file_type": "reads", "paired_end": "2", "accession": "4DNFIJRW6NDP", "display_title": "4DNFIJRW6NDP.fastq.gz", "uuid": "8f915a10-8623-4666-b2ed-fd174821dc42", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938697", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938697"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIJRW6NDP/@@download/4DNFIJRW6NDP.fastq.gz", "accession": "4DNFIJRW6NDP", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 349716332, "display_title": "4DNFIJRW6NDP.fastq.gz", "uuid": "8f915a10-8623-4666-b2ed-fd174821dc42", "upload_key": "8f915a10-8623-4666-b2ed-fd174821dc42/4DNFIJRW6NDP.fastq.gz", "dbxrefs": ["SRA:SRR5938697"], "@id": "/files-fastq/4DNFIJRW6NDP/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "d767ae0d-4103-4518-bf10-4aa1eb5bb569", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIJRW6NDP/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/d767ae0d-4103-4518-bf10-4aa1eb5bb569/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIK97I8JI/", "file_type": "reads", "paired_end": "1", "accession": "4DNFIK97I8JI", "display_title": "4DNFIK97I8JI.fastq.gz", "uuid": "421c4de7-2d7a-4ee4-a512-18b823674feb", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938697", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938697"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIHMJLGRN/@@download/4DNFIHMJLGRN.fastq.gz", "accession": "4DNFIHMJLGRN", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 407187760, "display_title": "4DNFIHMJLGRN.fastq.gz", "uuid": "8c7006d3-8d4f-4cca-91af-da348a869a12", "upload_key": "8c7006d3-8d4f-4cca-91af-da348a869a12/4DNFIHMJLGRN.fastq.gz", "dbxrefs": ["SRA:SRR5938696"], "@id": "/files-fastq/4DNFIHMJLGRN/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "578275ad-a7cc-4960-a86e-d5da6ce4028b", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-14", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIHMJLGRN/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/578275ad-a7cc-4960-a86e-d5da6ce4028b/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIG6PYWGM/", "file_type": "reads", "paired_end": "2", "accession": "4DNFIG6PYWGM", "display_title": "4DNFIG6PYWGM.fastq.gz", "uuid": "31ad0463-39d7-4f9c-aab9-8b6f63b111ab", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938696", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938696"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIG6PYWGM/@@download/4DNFIG6PYWGM.fastq.gz", "accession": "4DNFIG6PYWGM", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 345613257, "display_title": "4DNFIG6PYWGM.fastq.gz", "uuid": "31ad0463-39d7-4f9c-aab9-8b6f63b111ab", "upload_key": "31ad0463-39d7-4f9c-aab9-8b6f63b111ab/4DNFIG6PYWGM.fastq.gz", "dbxrefs": ["SRA:SRR5938696"], "@id": "/files-fastq/4DNFIG6PYWGM/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "5f2da89e-e6a2-42b0-9417-57f484097c88", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIG6PYWGM/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/5f2da89e-e6a2-42b0-9417-57f484097c88/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIHMJLGRN/", "file_type": "reads", "paired_end": "1", "accession": "4DNFIHMJLGRN", "display_title": "4DNFIHMJLGRN.fastq.gz", "uuid": "8c7006d3-8d4f-4cca-91af-da348a869a12", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938696", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938696"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIO63ZVDG/@@download/4DNFIO63ZVDG.fastq.gz", "accession": "4DNFIO63ZVDG", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 382385817, "display_title": "4DNFIO63ZVDG.fastq.gz", "uuid": "341a0728-2093-4eba-8b11-1f9eebcd258a", "upload_key": "341a0728-2093-4eba-8b11-1f9eebcd258a/4DNFIO63ZVDG.fastq.gz", "dbxrefs": ["SRA:SRR5938695"], "@id": "/files-fastq/4DNFIO63ZVDG/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "038cf26d-9a44-4344-8260-ba9ae5dbdce4", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-14", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIO63ZVDG/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/038cf26d-9a44-4344-8260-ba9ae5dbdce4/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFI427YJIH/", "file_type": "reads", "paired_end": "2", "accession": "4DNFI427YJIH", "display_title": "4DNFI427YJIH.fastq.gz", "uuid": "c5907f8e-a37d-4370-a16e-18060e9d035a", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938695", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938695"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFI427YJIH/@@download/4DNFI427YJIH.fastq.gz", "accession": "4DNFI427YJIH", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 336854794, "display_title": "4DNFI427YJIH.fastq.gz", "uuid": "c5907f8e-a37d-4370-a16e-18060e9d035a", "upload_key": "c5907f8e-a37d-4370-a16e-18060e9d035a/4DNFI427YJIH.fastq.gz", "dbxrefs": ["SRA:SRR5938695"], "@id": "/files-fastq/4DNFI427YJIH/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "8731dce7-c1f5-4a4c-8b29-2d1944473996", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI427YJIH/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/8731dce7-c1f5-4a4c-8b29-2d1944473996/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIO63ZVDG/", "file_type": "reads", "paired_end": "1", "accession": "4DNFIO63ZVDG", "display_title": "4DNFIO63ZVDG.fastq.gz", "uuid": "341a0728-2093-4eba-8b11-1f9eebcd258a", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938695", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938695"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIGO6L4YH/@@download/4DNFIGO6L4YH.fastq.gz", "accession": "4DNFIGO6L4YH", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 383614497, "display_title": "4DNFIGO6L4YH.fastq.gz", "uuid": "5f226ba5-3ae6-46bf-b6da-bd3289d3f68e", "upload_key": "5f226ba5-3ae6-46bf-b6da-bd3289d3f68e/4DNFIGO6L4YH.fastq.gz", "dbxrefs": ["SRA:SRR5938694"], "@id": "/files-fastq/4DNFIGO6L4YH/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "1f896428-9787-4438-a9f8-1eaf6085b493", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIGO6L4YH/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/1f896428-9787-4438-a9f8-1eaf6085b493/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFISJ2S8YQ/", "file_type": "reads", "paired_end": "2", "accession": "4DNFISJ2S8YQ", "display_title": "4DNFISJ2S8YQ.fastq.gz", "uuid": "3f16915e-f843-49c0-95f7-c75579cea8e7", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938694", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938694"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFISJ2S8YQ/@@download/4DNFISJ2S8YQ.fastq.gz", "accession": "4DNFISJ2S8YQ", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 363010946, "display_title": "4DNFISJ2S8YQ.fastq.gz", "uuid": "3f16915e-f843-49c0-95f7-c75579cea8e7", "upload_key": "3f16915e-f843-49c0-95f7-c75579cea8e7/4DNFISJ2S8YQ.fastq.gz", "dbxrefs": ["SRA:SRR5938694"], "@id": "/files-fastq/4DNFISJ2S8YQ/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "053f2897-8a86-41bb-9095-92924536f8c0", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-19", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFISJ2S8YQ/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/053f2897-8a86-41bb-9095-92924536f8c0/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIGO6L4YH/", "file_type": "reads", "paired_end": "1", "accession": "4DNFIGO6L4YH", "display_title": "4DNFIGO6L4YH.fastq.gz", "uuid": "5f226ba5-3ae6-46bf-b6da-bd3289d3f68e", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938694", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938694"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIWLG8DF8/@@download/4DNFIWLG8DF8.fastq.gz", "accession": "4DNFIWLG8DF8", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 381781974, "display_title": "4DNFIWLG8DF8.fastq.gz", "uuid": "f4078597-da1e-4b1f-82e4-a11e912994dd", "upload_key": "f4078597-da1e-4b1f-82e4-a11e912994dd/4DNFIWLG8DF8.fastq.gz", "dbxrefs": ["SRA:SRR5938693"], "@id": "/files-fastq/4DNFIWLG8DF8/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "0ffcff0f-1e2d-4b50-b9e8-1df3bdf3c1e7", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIWLG8DF8/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/0ffcff0f-1e2d-4b50-b9e8-1df3bdf3c1e7/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFI3OFGP41/", "file_type": "reads", "paired_end": "2", "accession": "4DNFI3OFGP41", "display_title": "4DNFI3OFGP41.fastq.gz", "uuid": "9cba3b16-bc6a-46d9-8a0a-3c762755292e", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938693", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938693"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFI3OFGP41/@@download/4DNFI3OFGP41.fastq.gz", "accession": "4DNFI3OFGP41", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 337702286, "display_title": "4DNFI3OFGP41.fastq.gz", "uuid": "9cba3b16-bc6a-46d9-8a0a-3c762755292e", "upload_key": "9cba3b16-bc6a-46d9-8a0a-3c762755292e/4DNFI3OFGP41.fastq.gz", "dbxrefs": ["SRA:SRR5938693"], "@id": "/files-fastq/4DNFI3OFGP41/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "ba6427be-80b9-4186-ba9c-b530206328cc", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI3OFGP41/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/ba6427be-80b9-4186-ba9c-b530206328cc/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIWLG8DF8/", "file_type": "reads", "paired_end": "1", "accession": "4DNFIWLG8DF8", "display_title": "4DNFIWLG8DF8.fastq.gz", "uuid": "f4078597-da1e-4b1f-82e4-a11e912994dd", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938693", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938693"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIA12GI88/@@download/4DNFIA12GI88.fastq.gz", "accession": "4DNFIA12GI88", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 378643310, "display_title": "4DNFIA12GI88.fastq.gz", "uuid": "f3fb6fc4-357b-4edf-9e25-5ac258814da0", "upload_key": "f3fb6fc4-357b-4edf-9e25-5ac258814da0/4DNFIA12GI88.fastq.gz", "dbxrefs": ["SRA:SRR5938692"], "@id": "/files-fastq/4DNFIA12GI88/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "375ef6cd-5609-4162-8166-5bf8b0996f7c", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-14", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIA12GI88/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/375ef6cd-5609-4162-8166-5bf8b0996f7c/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIYRNUAUP/", "file_type": "reads", "paired_end": "2", "accession": "4DNFIYRNUAUP", "display_title": "4DNFIYRNUAUP.fastq.gz", "uuid": "314fafb5-162b-4501-a530-5ca5c1ae0968", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938692", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938692"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIYRNUAUP/@@download/4DNFIYRNUAUP.fastq.gz", "accession": "4DNFIYRNUAUP", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 355541238, "display_title": "4DNFIYRNUAUP.fastq.gz", "uuid": "314fafb5-162b-4501-a530-5ca5c1ae0968", "upload_key": "314fafb5-162b-4501-a530-5ca5c1ae0968/4DNFIYRNUAUP.fastq.gz", "dbxrefs": ["SRA:SRR5938692"], "@id": "/files-fastq/4DNFIYRNUAUP/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "f1d7a825-803d-4c27-998b-010478271e6d", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIYRNUAUP/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/f1d7a825-803d-4c27-998b-010478271e6d/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIA12GI88/", "file_type": "reads", "paired_end": "1", "accession": "4DNFIA12GI88", "display_title": "4DNFIA12GI88.fastq.gz", "uuid": "f3fb6fc4-357b-4edf-9e25-5ac258814da0", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938692", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938692"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIC754VEK/@@download/4DNFIC754VEK.fastq.gz", "accession": "4DNFIC754VEK", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 380619076, "display_title": "4DNFIC754VEK.fastq.gz", "uuid": "47d4d253-8716-4cc2-9a27-fad20d137826", "upload_key": "47d4d253-8716-4cc2-9a27-fad20d137826/4DNFIC754VEK.fastq.gz", "dbxrefs": ["SRA:SRR5938691"], "@id": "/files-fastq/4DNFIC754VEK/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "1e14499e-70d5-4286-acc0-d5ed75f93ce2", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIC754VEK/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/1e14499e-70d5-4286-acc0-d5ed75f93ce2/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIO958TMZ/", "file_type": "reads", "paired_end": "2", "accession": "4DNFIO958TMZ", "display_title": "4DNFIO958TMZ.fastq.gz", "uuid": "2b854453-6f50-451e-9a0e-d72910327ebb", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938691", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938691"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIO958TMZ/@@download/4DNFIO958TMZ.fastq.gz", "accession": "4DNFIO958TMZ", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 356865576, "display_title": "4DNFIO958TMZ.fastq.gz", "uuid": "2b854453-6f50-451e-9a0e-d72910327ebb", "upload_key": "2b854453-6f50-451e-9a0e-d72910327ebb/4DNFIO958TMZ.fastq.gz", "dbxrefs": ["SRA:SRR5938691"], "@id": "/files-fastq/4DNFIO958TMZ/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "847e6129-ef03-450d-86e3-4a636e27c762", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIO958TMZ/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/847e6129-ef03-450d-86e3-4a636e27c762/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIC754VEK/", "file_type": "reads", "paired_end": "1", "accession": "4DNFIC754VEK", "display_title": "4DNFIC754VEK.fastq.gz", "uuid": "47d4d253-8716-4cc2-9a27-fad20d137826", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938691", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938691"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFI89OON2V/@@download/4DNFI89OON2V.fastq.gz", "accession": "4DNFI89OON2V", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 402083576, "display_title": "4DNFI89OON2V.fastq.gz", "uuid": "b81e9bd7-2a49-42a4-8901-71dac4d0390c", "upload_key": "b81e9bd7-2a49-42a4-8901-71dac4d0390c/4DNFI89OON2V.fastq.gz", "dbxrefs": ["SRA:SRR5938690"], "@id": "/files-fastq/4DNFI89OON2V/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "cf6de420-6fa7-4329-b4a2-9821d5ff8781", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI89OON2V/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/cf6de420-6fa7-4329-b4a2-9821d5ff8781/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIL7AMXHZ/", "file_type": "reads", "paired_end": "2", "accession": "4DNFIL7AMXHZ", "display_title": "4DNFIL7AMXHZ.fastq.gz", "uuid": "4331dc71-16d9-46fe-a308-fc200b9a8414", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938690", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938690"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIL7AMXHZ/@@download/4DNFIL7AMXHZ.fastq.gz", "accession": "4DNFIL7AMXHZ", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 352958309, "display_title": "4DNFIL7AMXHZ.fastq.gz", "uuid": "4331dc71-16d9-46fe-a308-fc200b9a8414", "upload_key": "4331dc71-16d9-46fe-a308-fc200b9a8414/4DNFIL7AMXHZ.fastq.gz", "dbxrefs": ["SRA:SRR5938690"], "@id": "/files-fastq/4DNFIL7AMXHZ/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "b89c27be-4fba-41c9-b353-1b45cd5b6b12", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIL7AMXHZ/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/b89c27be-4fba-41c9-b353-1b45cd5b6b12/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFI89OON2V/", "file_type": "reads", "paired_end": "1", "accession": "4DNFI89OON2V", "display_title": "4DNFI89OON2V.fastq.gz", "uuid": "b81e9bd7-2a49-42a4-8901-71dac4d0390c", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938690", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938690"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFITIAJWXY/@@download/4DNFITIAJWXY.fastq.gz", "accession": "4DNFITIAJWXY", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 389728885, "display_title": "4DNFITIAJWXY.fastq.gz", "uuid": "52a90d7c-627e-489d-b54d-e8ebe3420027", "upload_key": "52a90d7c-627e-489d-b54d-e8ebe3420027/4DNFITIAJWXY.fastq.gz", "dbxrefs": ["SRA:SRR5938689"], "@id": "/files-fastq/4DNFITIAJWXY/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "385bfeb0-4134-4b44-adf2-02570bcc8f67", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFITIAJWXY/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/385bfeb0-4134-4b44-adf2-02570bcc8f67/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIIHIKWBV/", "file_type": "reads", "paired_end": "2", "accession": "4DNFIIHIKWBV", "display_title": "4DNFIIHIKWBV.fastq.gz", "uuid": "e82fe1ad-27dc-428c-836b-d47af2f12500", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938689", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938689"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIIHIKWBV/@@download/4DNFIIHIKWBV.fastq.gz", "accession": "4DNFIIHIKWBV", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 376260247, "display_title": "4DNFIIHIKWBV.fastq.gz", "uuid": "e82fe1ad-27dc-428c-836b-d47af2f12500", "upload_key": "e82fe1ad-27dc-428c-836b-d47af2f12500/4DNFIIHIKWBV.fastq.gz", "dbxrefs": ["SRA:SRR5938689"], "@id": "/files-fastq/4DNFIIHIKWBV/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "f3ee1390-acc7-4a02-a6cf-0cd06d40ef82", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIIHIKWBV/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/f3ee1390-acc7-4a02-a6cf-0cd06d40ef82/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFITIAJWXY/", "file_type": "reads", "paired_end": "1", "accession": "4DNFITIAJWXY", "display_title": "4DNFITIAJWXY.fastq.gz", "uuid": "52a90d7c-627e-489d-b54d-e8ebe3420027", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938689", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938689"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFI9XLAD58/@@download/4DNFI9XLAD58.fastq.gz", "accession": "4DNFI9XLAD58", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 387350726, "display_title": "4DNFI9XLAD58.fastq.gz", "uuid": "c3c87627-5245-401c-a615-51c5f51c84c2", "upload_key": "c3c87627-5245-401c-a615-51c5f51c84c2/4DNFI9XLAD58.fastq.gz", "dbxrefs": ["SRA:SRR5938688"], "@id": "/files-fastq/4DNFI9XLAD58/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "adb29236-2bf2-4304-bcd5-4353a13d1a57", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI9XLAD58/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/adb29236-2bf2-4304-bcd5-4353a13d1a57/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIXM4DYO2/", "file_type": "reads", "paired_end": "2", "accession": "4DNFIXM4DYO2", "display_title": "4DNFIXM4DYO2.fastq.gz", "uuid": "0565df02-8682-4b5f-acb4-9c7298e179d7", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938688", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938688"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIXM4DYO2/@@download/4DNFIXM4DYO2.fastq.gz", "accession": "4DNFIXM4DYO2", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 347475030, "display_title": "4DNFIXM4DYO2.fastq.gz", "uuid": "0565df02-8682-4b5f-acb4-9c7298e179d7", "upload_key": "0565df02-8682-4b5f-acb4-9c7298e179d7/4DNFIXM4DYO2.fastq.gz", "dbxrefs": ["SRA:SRR5938688"], "@id": "/files-fastq/4DNFIXM4DYO2/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "fb47ad63-4582-487d-83b9-8597a29cee53", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIXM4DYO2/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/fb47ad63-4582-487d-83b9-8597a29cee53/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFI9XLAD58/", "file_type": "reads", "paired_end": "1", "accession": "4DNFI9XLAD58", "display_title": "4DNFI9XLAD58.fastq.gz", "uuid": "c3c87627-5245-401c-a615-51c5f51c84c2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938688", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938688"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFI1BPD1WX/@@download/4DNFI1BPD1WX.fastq.gz", "accession": "4DNFI1BPD1WX", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 408026210, "display_title": "4DNFI1BPD1WX.fastq.gz", "uuid": "e87b4d25-2235-41df-b7c3-743412cad529", "upload_key": "e87b4d25-2235-41df-b7c3-743412cad529/4DNFI1BPD1WX.fastq.gz", "dbxrefs": ["SRA:SRR5938687"], "@id": "/files-fastq/4DNFI1BPD1WX/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "6e84c076-ea37-4f87-bdcd-4a25c605b03c", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI1BPD1WX/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/6e84c076-ea37-4f87-bdcd-4a25c605b03c/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFI4N4HIWD/", "file_type": "reads", "paired_end": "2", "accession": "4DNFI4N4HIWD", "display_title": "4DNFI4N4HIWD.fastq.gz", "uuid": "2270f562-065b-4806-a57d-4b52c4b9dced", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938687", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938687"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFI4N4HIWD/@@download/4DNFI4N4HIWD.fastq.gz", "accession": "4DNFI4N4HIWD", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 342472442, "display_title": "4DNFI4N4HIWD.fastq.gz", "uuid": "2270f562-065b-4806-a57d-4b52c4b9dced", "upload_key": "2270f562-065b-4806-a57d-4b52c4b9dced/4DNFI4N4HIWD.fastq.gz", "dbxrefs": ["SRA:SRR5938687"], "@id": "/files-fastq/4DNFI4N4HIWD/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "76647f2b-1829-431d-b923-7c66e1b72b9e", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI4N4HIWD/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/76647f2b-1829-431d-b923-7c66e1b72b9e/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFI1BPD1WX/", "file_type": "reads", "paired_end": "1", "accession": "4DNFI1BPD1WX", "display_title": "4DNFI1BPD1WX.fastq.gz", "uuid": "e87b4d25-2235-41df-b7c3-743412cad529", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938687", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938687"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIZVYAV5V/@@download/4DNFIZVYAV5V.fastq.gz", "accession": "4DNFIZVYAV5V", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 406519288, "display_title": "4DNFIZVYAV5V.fastq.gz", "uuid": "a5140b51-6b7a-437d-9cd9-d14b4ef92694", "upload_key": "a5140b51-6b7a-437d-9cd9-d14b4ef92694/4DNFIZVYAV5V.fastq.gz", "dbxrefs": ["SRA:SRR5938686"], "@id": "/files-fastq/4DNFIZVYAV5V/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "dc97c831-ec18-48c1-bdc2-84aa1ddf2ed6", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIZVYAV5V/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/dc97c831-ec18-48c1-bdc2-84aa1ddf2ed6/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIUTZ8KCZ/", "file_type": "reads", "paired_end": "2", "accession": "4DNFIUTZ8KCZ", "display_title": "4DNFIUTZ8KCZ.fastq.gz", "uuid": "82f63347-0578-4180-ae22-ef6c984907e8", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938686", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938686"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIUTZ8KCZ/@@download/4DNFIUTZ8KCZ.fastq.gz", "accession": "4DNFIUTZ8KCZ", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 361283844, "display_title": "4DNFIUTZ8KCZ.fastq.gz", "uuid": "82f63347-0578-4180-ae22-ef6c984907e8", "upload_key": "82f63347-0578-4180-ae22-ef6c984907e8/4DNFIUTZ8KCZ.fastq.gz", "dbxrefs": ["SRA:SRR5938686"], "@id": "/files-fastq/4DNFIUTZ8KCZ/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "64493e79-5dcb-4e0f-ad49-d35b669d8016", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIUTZ8KCZ/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/64493e79-5dcb-4e0f-ad49-d35b669d8016/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIZVYAV5V/", "file_type": "reads", "paired_end": "1", "accession": "4DNFIZVYAV5V", "display_title": "4DNFIZVYAV5V.fastq.gz", "uuid": "a5140b51-6b7a-437d-9cd9-d14b4ef92694", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938686", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938686"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFI8ZW2KS9/@@download/4DNFI8ZW2KS9.fastq.gz", "accession": "4DNFI8ZW2KS9", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 380369176, "display_title": "4DNFI8ZW2KS9.fastq.gz", "uuid": "76fd55ab-e316-475f-a599-31ce978fe4f0", "upload_key": "76fd55ab-e316-475f-a599-31ce978fe4f0/4DNFI8ZW2KS9.fastq.gz", "dbxrefs": ["SRA:SRR5938685"], "@id": "/files-fastq/4DNFI8ZW2KS9/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "d6852625-35e3-47b8-a393-c1971bb1f10a", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI8ZW2KS9/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/d6852625-35e3-47b8-a393-c1971bb1f10a/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIHB9YL6D/", "file_type": "reads", "paired_end": "2", "accession": "4DNFIHB9YL6D", "display_title": "4DNFIHB9YL6D.fastq.gz", "uuid": "74b4a4d8-a5d3-40a3-804c-3041cd62e708", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938685", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938685"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIHB9YL6D/@@download/4DNFIHB9YL6D.fastq.gz", "accession": "4DNFIHB9YL6D", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 333812785, "display_title": "4DNFIHB9YL6D.fastq.gz", "uuid": "74b4a4d8-a5d3-40a3-804c-3041cd62e708", "upload_key": "74b4a4d8-a5d3-40a3-804c-3041cd62e708/4DNFIHB9YL6D.fastq.gz", "dbxrefs": ["SRA:SRR5938685"], "@id": "/files-fastq/4DNFIHB9YL6D/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "d17b99c4-8328-4fa9-9336-6a33982f2efe", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIHB9YL6D/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/d17b99c4-8328-4fa9-9336-6a33982f2efe/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFI8ZW2KS9/", "file_type": "reads", "paired_end": "1", "accession": "4DNFI8ZW2KS9", "display_title": "4DNFI8ZW2KS9.fastq.gz", "uuid": "76fd55ab-e316-475f-a599-31ce978fe4f0", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938685", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938685"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIJG3WR9L/@@download/4DNFIJG3WR9L.fastq.gz", "accession": "4DNFIJG3WR9L", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 405260191, "display_title": "4DNFIJG3WR9L.fastq.gz", "uuid": "6a44bb92-bfed-4db1-96ba-64d6e6696139", "upload_key": "6a44bb92-bfed-4db1-96ba-64d6e6696139/4DNFIJG3WR9L.fastq.gz", "dbxrefs": ["SRA:SRR5938684"], "@id": "/files-fastq/4DNFIJG3WR9L/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "c9cb4e05-5bee-41af-b096-74bae5f270da", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIJG3WR9L/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/c9cb4e05-5bee-41af-b096-74bae5f270da/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFI4R9WP5H/", "file_type": "reads", "paired_end": "2", "accession": "4DNFI4R9WP5H", "display_title": "4DNFI4R9WP5H.fastq.gz", "uuid": "56fc766c-7812-4b29-a9b0-14577120af2f", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938684", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938684"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFI4R9WP5H/@@download/4DNFI4R9WP5H.fastq.gz", "accession": "4DNFI4R9WP5H", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 334270905, "display_title": "4DNFI4R9WP5H.fastq.gz", "uuid": "56fc766c-7812-4b29-a9b0-14577120af2f", "upload_key": "56fc766c-7812-4b29-a9b0-14577120af2f/4DNFI4R9WP5H.fastq.gz", "dbxrefs": ["SRA:SRR5938684"], "@id": "/files-fastq/4DNFI4R9WP5H/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "6f48af22-ebe6-47e8-bf89-e8710732217e", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI4R9WP5H/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/6f48af22-ebe6-47e8-bf89-e8710732217e/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIJG3WR9L/", "file_type": "reads", "paired_end": "1", "accession": "4DNFIJG3WR9L", "display_title": "4DNFIJG3WR9L.fastq.gz", "uuid": "6a44bb92-bfed-4db1-96ba-64d6e6696139", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938684", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938684"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIBLR846W/@@download/4DNFIBLR846W.fastq.gz", "accession": "4DNFIBLR846W", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 398432765, "display_title": "4DNFIBLR846W.fastq.gz", "uuid": "fbe06ed0-7772-4cb0-8eab-d79006a5e512", "upload_key": "fbe06ed0-7772-4cb0-8eab-d79006a5e512/4DNFIBLR846W.fastq.gz", "dbxrefs": ["SRA:SRR5938708"], "@id": "/files-fastq/4DNFIBLR846W/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "20e40ebf-9b1a-40d2-b7e6-32563b163695", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIBLR846W/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/20e40ebf-9b1a-40d2-b7e6-32563b163695/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFI2CG7UV9/", "file_type": "reads", "paired_end": "2", "accession": "4DNFI2CG7UV9", "display_title": "4DNFI2CG7UV9.fastq.gz", "uuid": "2b0ebe3d-db49-4dae-9b96-ec296450122a", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938708", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938708"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFI2CG7UV9/@@download/4DNFI2CG7UV9.fastq.gz", "accession": "4DNFI2CG7UV9", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 351522980, "display_title": "4DNFI2CG7UV9.fastq.gz", "uuid": "2b0ebe3d-db49-4dae-9b96-ec296450122a", "upload_key": "2b0ebe3d-db49-4dae-9b96-ec296450122a/4DNFI2CG7UV9.fastq.gz", "dbxrefs": ["SRA:SRR5938708"], "@id": "/files-fastq/4DNFI2CG7UV9/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "ecfaa2ae-e58b-43a4-88fb-010f10219620", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI2CG7UV9/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/ecfaa2ae-e58b-43a4-88fb-010f10219620/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIBLR846W/", "file_type": "reads", "paired_end": "1", "accession": "4DNFIBLR846W", "display_title": "4DNFIBLR846W.fastq.gz", "uuid": "fbe06ed0-7772-4cb0-8eab-d79006a5e512", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938708", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938708"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFI2FCJEBS/@@download/4DNFI2FCJEBS.fastq.gz", "accession": "4DNFI2FCJEBS", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 376636802, "display_title": "4DNFI2FCJEBS.fastq.gz", "uuid": "cb56b77f-7fee-4685-8e00-80cf3539076d", "upload_key": "cb56b77f-7fee-4685-8e00-80cf3539076d/4DNFI2FCJEBS.fastq.gz", "dbxrefs": ["SRA:SRR5938707"], "@id": "/files-fastq/4DNFI2FCJEBS/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "528534d1-99e3-465e-b87b-d0b1b3dbad9c", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI2FCJEBS/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/528534d1-99e3-465e-b87b-d0b1b3dbad9c/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIMKH9TP4/", "file_type": "reads", "paired_end": "2", "accession": "4DNFIMKH9TP4", "display_title": "4DNFIMKH9TP4.fastq.gz", "uuid": "669d7ab5-8ce5-46a3-8664-70aed615ff7a", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938707", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938707"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIMKH9TP4/@@download/4DNFIMKH9TP4.fastq.gz", "accession": "4DNFIMKH9TP4", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 352350308, "display_title": "4DNFIMKH9TP4.fastq.gz", "uuid": "669d7ab5-8ce5-46a3-8664-70aed615ff7a", "upload_key": "669d7ab5-8ce5-46a3-8664-70aed615ff7a/4DNFIMKH9TP4.fastq.gz", "dbxrefs": ["SRA:SRR5938707"], "@id": "/files-fastq/4DNFIMKH9TP4/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "7cb87edb-4f15-45c4-9666-8e39bca5bfa2", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-14", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIMKH9TP4/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/7cb87edb-4f15-45c4-9666-8e39bca5bfa2/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFI2FCJEBS/", "file_type": "reads", "paired_end": "1", "accession": "4DNFI2FCJEBS", "display_title": "4DNFI2FCJEBS.fastq.gz", "uuid": "cb56b77f-7fee-4685-8e00-80cf3539076d", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938707", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938707"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFI2QN3859/@@download/4DNFI2QN3859.fastq.gz", "accession": "4DNFI2QN3859", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 401986835, "display_title": "4DNFI2QN3859.fastq.gz", "uuid": "a3950c87-3ba9-4237-aa18-483133461650", "upload_key": "a3950c87-3ba9-4237-aa18-483133461650/4DNFI2QN3859.fastq.gz", "dbxrefs": ["SRA:SRR5938709"], "@id": "/files-fastq/4DNFI2QN3859/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "99e585c1-7e96-416a-9862-f1367a60d35b", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-14", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI2QN3859/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/99e585c1-7e96-416a-9862-f1367a60d35b/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFITZPWDH3/", "file_type": "reads", "paired_end": "2", "accession": "4DNFITZPWDH3", "display_title": "4DNFITZPWDH3.fastq.gz", "uuid": "1effb4a3-df43-4a51-9857-9aac31922244", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938709", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938709"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFITZPWDH3/@@download/4DNFITZPWDH3.fastq.gz", "accession": "4DNFITZPWDH3", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 356772085, "display_title": "4DNFITZPWDH3.fastq.gz", "uuid": "1effb4a3-df43-4a51-9857-9aac31922244", "upload_key": "1effb4a3-df43-4a51-9857-9aac31922244/4DNFITZPWDH3.fastq.gz", "dbxrefs": ["SRA:SRR5938709"], "@id": "/files-fastq/4DNFITZPWDH3/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "ba8e5539-149b-4932-80c1-432c75a680e2", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFITZPWDH3/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/ba8e5539-149b-4932-80c1-432c75a680e2/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFI2QN3859/", "file_type": "reads", "paired_end": "1", "accession": "4DNFI2QN3859", "display_title": "4DNFI2QN3859.fastq.gz", "uuid": "a3950c87-3ba9-4237-aa18-483133461650", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938709", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938709"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIQ1EIHP9/@@download/4DNFIQ1EIHP9.fastq.gz", "accession": "4DNFIQ1EIHP9", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 400473799, "display_title": "4DNFIQ1EIHP9.fastq.gz", "uuid": "5d2c99ba-4954-46e3-bcf6-8c2caad82fc4", "upload_key": "5d2c99ba-4954-46e3-bcf6-8c2caad82fc4/4DNFIQ1EIHP9.fastq.gz", "dbxrefs": ["SRA:SRR5938705"], "@id": "/files-fastq/4DNFIQ1EIHP9/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "74cccf35-e804-4e46-a74a-dd6e6a59b9d3", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIQ1EIHP9/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/74cccf35-e804-4e46-a74a-dd6e6a59b9d3/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFI8DALQNI/", "file_type": "reads", "paired_end": "2", "accession": "4DNFI8DALQNI", "display_title": "4DNFI8DALQNI.fastq.gz", "uuid": "53b870eb-02e9-4bb8-b440-80f976b294d8", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938705", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938705"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFI8DALQNI/@@download/4DNFI8DALQNI.fastq.gz", "accession": "4DNFI8DALQNI", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 352143269, "display_title": "4DNFI8DALQNI.fastq.gz", "uuid": "53b870eb-02e9-4bb8-b440-80f976b294d8", "upload_key": "53b870eb-02e9-4bb8-b440-80f976b294d8/4DNFI8DALQNI.fastq.gz", "dbxrefs": ["SRA:SRR5938705"], "@id": "/files-fastq/4DNFI8DALQNI/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "469e6d2a-c4bc-4b63-969f-af240e607912", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI8DALQNI/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/469e6d2a-c4bc-4b63-969f-af240e607912/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIQ1EIHP9/", "file_type": "reads", "paired_end": "1", "accession": "4DNFIQ1EIHP9", "display_title": "4DNFIQ1EIHP9.fastq.gz", "uuid": "5d2c99ba-4954-46e3-bcf6-8c2caad82fc4", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938705", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938705"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIBKOZMR8/@@download/4DNFIBKOZMR8.fastq.gz", "accession": "4DNFIBKOZMR8", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 409336800, "display_title": "4DNFIBKOZMR8.fastq.gz", "uuid": "7f06f887-e652-43be-b48f-b7ac73808adf", "upload_key": "7f06f887-e652-43be-b48f-b7ac73808adf/4DNFIBKOZMR8.fastq.gz", "dbxrefs": ["SRA:SRR5938704"], "@id": "/files-fastq/4DNFIBKOZMR8/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "1b83e911-d4bb-4af9-a004-2f5c3181b739", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIBKOZMR8/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/1b83e911-d4bb-4af9-a004-2f5c3181b739/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIG2JGS85/", "file_type": "reads", "paired_end": "2", "accession": "4DNFIG2JGS85", "display_title": "4DNFIG2JGS85.fastq.gz", "uuid": "0114602a-4150-4249-9677-65c6eafad5a9", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938704", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938704"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIG2JGS85/@@download/4DNFIG2JGS85.fastq.gz", "accession": "4DNFIG2JGS85", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 376325156, "display_title": "4DNFIG2JGS85.fastq.gz", "uuid": "0114602a-4150-4249-9677-65c6eafad5a9", "upload_key": "0114602a-4150-4249-9677-65c6eafad5a9/4DNFIG2JGS85.fastq.gz", "dbxrefs": ["SRA:SRR5938704"], "@id": "/files-fastq/4DNFIG2JGS85/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "f28c8954-4184-40b6-8665-c653d6777c2c", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-14", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIG2JGS85/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/f28c8954-4184-40b6-8665-c653d6777c2c/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIBKOZMR8/", "file_type": "reads", "paired_end": "1", "accession": "4DNFIBKOZMR8", "display_title": "4DNFIBKOZMR8.fastq.gz", "uuid": "7f06f887-e652-43be-b48f-b7ac73808adf", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938704", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938704"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFI6HBJ8GY/@@download/4DNFI6HBJ8GY.fastq.gz", "accession": "4DNFI6HBJ8GY", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 383898948, "display_title": "4DNFI6HBJ8GY.fastq.gz", "uuid": "dda18968-8d80-4ee1-9aff-6112c718c941", "upload_key": "dda18968-8d80-4ee1-9aff-6112c718c941/4DNFI6HBJ8GY.fastq.gz", "dbxrefs": ["SRA:SRR5938703"], "@id": "/files-fastq/4DNFI6HBJ8GY/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "b1279563-7c9e-40db-9a44-a4cf4c8c8f57", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI6HBJ8GY/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/b1279563-7c9e-40db-9a44-a4cf4c8c8f57/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFI3TWFWEG/", "file_type": "reads", "paired_end": "2", "accession": "4DNFI3TWFWEG", "display_title": "4DNFI3TWFWEG.fastq.gz", "uuid": "15c07616-4601-4b14-a6e6-1b05d9c86d5a", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938703", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938703"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFI3TWFWEG/@@download/4DNFI3TWFWEG.fastq.gz", "accession": "4DNFI3TWFWEG", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 369353679, "display_title": "4DNFI3TWFWEG.fastq.gz", "uuid": "15c07616-4601-4b14-a6e6-1b05d9c86d5a", "upload_key": "15c07616-4601-4b14-a6e6-1b05d9c86d5a/4DNFI3TWFWEG.fastq.gz", "dbxrefs": ["SRA:SRR5938703"], "@id": "/files-fastq/4DNFI3TWFWEG/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "e5d9fac0-5cad-4d5b-ad6b-6f9ed7d34ecf", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI3TWFWEG/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/e5d9fac0-5cad-4d5b-ad6b-6f9ed7d34ecf/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFI6HBJ8GY/", "file_type": "reads", "paired_end": "1", "accession": "4DNFI6HBJ8GY", "display_title": "4DNFI6HBJ8GY.fastq.gz", "uuid": "dda18968-8d80-4ee1-9aff-6112c718c941", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938703", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938703"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIR2LWHIB/@@download/4DNFIR2LWHIB.fastq.gz", "accession": "4DNFIR2LWHIB", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 403565061, "display_title": "4DNFIR2LWHIB.fastq.gz", "uuid": "77458966-0011-4351-9d4c-34467b5b1f53", "upload_key": "77458966-0011-4351-9d4c-34467b5b1f53/4DNFIR2LWHIB.fastq.gz", "dbxrefs": ["SRA:SRR5938710"], "@id": "/files-fastq/4DNFIR2LWHIB/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "39be2891-f09a-4d8c-b495-dd6e2f8dea35", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIR2LWHIB/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/39be2891-f09a-4d8c-b495-dd6e2f8dea35/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFI5FXC74N/", "file_type": "reads", "paired_end": "2", "accession": "4DNFI5FXC74N", "display_title": "4DNFI5FXC74N.fastq.gz", "uuid": "b14f2c4e-1c31-4c4d-bc86-9d42d90b2e59", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938710", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938710"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFI5FXC74N/@@download/4DNFI5FXC74N.fastq.gz", "accession": "4DNFI5FXC74N", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 338578599, "display_title": "4DNFI5FXC74N.fastq.gz", "uuid": "b14f2c4e-1c31-4c4d-bc86-9d42d90b2e59", "upload_key": "b14f2c4e-1c31-4c4d-bc86-9d42d90b2e59/4DNFI5FXC74N.fastq.gz", "dbxrefs": ["SRA:SRR5938710"], "@id": "/files-fastq/4DNFI5FXC74N/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "b7b3f803-28b0-4be2-894b-aab40b5f077e", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI5FXC74N/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/b7b3f803-28b0-4be2-894b-aab40b5f077e/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIR2LWHIB/", "file_type": "reads", "paired_end": "1", "accession": "4DNFIR2LWHIB", "display_title": "4DNFIR2LWHIB.fastq.gz", "uuid": "77458966-0011-4351-9d4c-34467b5b1f53", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938710", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938710"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFI1UOTY1I/@@download/4DNFI1UOTY1I.fastq.gz", "accession": "4DNFI1UOTY1I", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 403499602, "display_title": "4DNFI1UOTY1I.fastq.gz", "uuid": "f7e6e9f7-2cc7-49f1-8791-2b73539c5f71", "upload_key": "f7e6e9f7-2cc7-49f1-8791-2b73539c5f71/4DNFI1UOTY1I.fastq.gz", "dbxrefs": ["SRA:SRR5938701"], "@id": "/files-fastq/4DNFI1UOTY1I/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "e8c573ec-36d1-4a2b-9acb-872a3325a008", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI1UOTY1I/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/e8c573ec-36d1-4a2b-9acb-872a3325a008/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFI5QHIF6W/", "file_type": "reads", "paired_end": "2", "accession": "4DNFI5QHIF6W", "display_title": "4DNFI5QHIF6W.fastq.gz", "uuid": "29637512-7881-4651-9bcb-c27246058f05", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938701", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938701"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFI5QHIF6W/@@download/4DNFI5QHIF6W.fastq.gz", "accession": "4DNFI5QHIF6W", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 337937926, "display_title": "4DNFI5QHIF6W.fastq.gz", "uuid": "29637512-7881-4651-9bcb-c27246058f05", "upload_key": "29637512-7881-4651-9bcb-c27246058f05/4DNFI5QHIF6W.fastq.gz", "dbxrefs": ["SRA:SRR5938701"], "@id": "/files-fastq/4DNFI5QHIF6W/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "a009801a-8d8d-4b9b-95ce-8adc7bdd6f16", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-14", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI5QHIF6W/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/a009801a-8d8d-4b9b-95ce-8adc7bdd6f16/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFI1UOTY1I/", "file_type": "reads", "paired_end": "1", "accession": "4DNFI1UOTY1I", "display_title": "4DNFI1UOTY1I.fastq.gz", "uuid": "f7e6e9f7-2cc7-49f1-8791-2b73539c5f71", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938701", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938701"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIDTXRFTI/@@download/4DNFIDTXRFTI.fastq.gz", "accession": "4DNFIDTXRFTI", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 401305861, "display_title": "4DNFIDTXRFTI.fastq.gz", "uuid": "84890047-ece3-49cb-971b-90e610c304c2", "upload_key": "84890047-ece3-49cb-971b-90e610c304c2/4DNFIDTXRFTI.fastq.gz", "dbxrefs": ["SRA:SRR5938700"], "@id": "/files-fastq/4DNFIDTXRFTI/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "eecb53ee-509f-4124-9ca1-2c3288e775c0", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIDTXRFTI/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/eecb53ee-509f-4124-9ca1-2c3288e775c0/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIVX2YAVQ/", "file_type": "reads", "paired_end": "2", "accession": "4DNFIVX2YAVQ", "display_title": "4DNFIVX2YAVQ.fastq.gz", "uuid": "3900f82d-385b-49b7-95db-2570b9a5f6b2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938700", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938700"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIVX2YAVQ/@@download/4DNFIVX2YAVQ.fastq.gz", "accession": "4DNFIVX2YAVQ", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 355402937, "display_title": "4DNFIVX2YAVQ.fastq.gz", "uuid": "3900f82d-385b-49b7-95db-2570b9a5f6b2", "upload_key": "3900f82d-385b-49b7-95db-2570b9a5f6b2/4DNFIVX2YAVQ.fastq.gz", "dbxrefs": ["SRA:SRR5938700"], "@id": "/files-fastq/4DNFIVX2YAVQ/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "fa76161c-7646-49cb-9931-db1156447784", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIVX2YAVQ/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/fa76161c-7646-49cb-9931-db1156447784/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIDTXRFTI/", "file_type": "reads", "paired_end": "1", "accession": "4DNFIDTXRFTI", "display_title": "4DNFIDTXRFTI.fastq.gz", "uuid": "84890047-ece3-49cb-971b-90e610c304c2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938700", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938700"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFI51BUJQF/@@download/4DNFI51BUJQF.fastq.gz", "accession": "4DNFI51BUJQF", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 400002556, "display_title": "4DNFI51BUJQF.fastq.gz", "uuid": "ad402f6c-a193-4bcb-839c-401b3f97405c", "upload_key": "ad402f6c-a193-4bcb-839c-401b3f97405c/4DNFI51BUJQF.fastq.gz", "dbxrefs": ["SRA:SRR5938699"], "@id": "/files-fastq/4DNFI51BUJQF/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "d1bd2b80-292c-4fd9-9b0d-63fc7214ac9c", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI51BUJQF/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/d1bd2b80-292c-4fd9-9b0d-63fc7214ac9c/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIYC2YZRT/", "file_type": "reads", "paired_end": "2", "accession": "4DNFIYC2YZRT", "display_title": "4DNFIYC2YZRT.fastq.gz", "uuid": "25f3817c-b428-417d-83d8-fda818fe61be", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938699", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938699"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIYC2YZRT/@@download/4DNFIYC2YZRT.fastq.gz", "accession": "4DNFIYC2YZRT", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 353475215, "display_title": "4DNFIYC2YZRT.fastq.gz", "uuid": "25f3817c-b428-417d-83d8-fda818fe61be", "upload_key": "25f3817c-b428-417d-83d8-fda818fe61be/4DNFIYC2YZRT.fastq.gz", "dbxrefs": ["SRA:SRR5938699"], "@id": "/files-fastq/4DNFIYC2YZRT/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "9400a0c5-cf58-4087-89cf-000f3dfd8ff4", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-14", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIYC2YZRT/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/9400a0c5-cf58-4087-89cf-000f3dfd8ff4/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFI51BUJQF/", "file_type": "reads", "paired_end": "1", "accession": "4DNFI51BUJQF", "display_title": "4DNFI51BUJQF.fastq.gz", "uuid": "ad402f6c-a193-4bcb-839c-401b3f97405c", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938699", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938699"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIZRUO11E/@@download/4DNFIZRUO11E.fastq.gz", "accession": "4DNFIZRUO11E", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 405587287, "display_title": "4DNFIZRUO11E.fastq.gz", "uuid": "16f26cab-e0ad-44cc-848b-0fb49fffe022", "upload_key": "16f26cab-e0ad-44cc-848b-0fb49fffe022/4DNFIZRUO11E.fastq.gz", "dbxrefs": ["SRA:SRR5938711"], "@id": "/files-fastq/4DNFIZRUO11E/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "545dfcc8-0377-42e5-be34-6a84b8062e09", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIZRUO11E/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/545dfcc8-0377-42e5-be34-6a84b8062e09/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIOZIBDR1/", "file_type": "reads", "paired_end": "2", "accession": "4DNFIOZIBDR1", "display_title": "4DNFIOZIBDR1.fastq.gz", "uuid": "f79cdf2c-c689-4b2b-800f-70e8315587b7", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938711", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938711"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIOZIBDR1/@@download/4DNFIOZIBDR1.fastq.gz", "accession": "4DNFIOZIBDR1", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 365913691, "display_title": "4DNFIOZIBDR1.fastq.gz", "uuid": "f79cdf2c-c689-4b2b-800f-70e8315587b7", "upload_key": "f79cdf2c-c689-4b2b-800f-70e8315587b7/4DNFIOZIBDR1.fastq.gz", "dbxrefs": ["SRA:SRR5938711"], "@id": "/files-fastq/4DNFIOZIBDR1/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "bd0bc6a2-1eac-4836-8328-196839f0fe5c", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIOZIBDR1/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/bd0bc6a2-1eac-4836-8328-196839f0fe5c/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIZRUO11E/", "file_type": "reads", "paired_end": "1", "accession": "4DNFIZRUO11E", "display_title": "4DNFIZRUO11E.fastq.gz", "uuid": "16f26cab-e0ad-44cc-848b-0fb49fffe022", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938711", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938711"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIRWIAHMC/@@download/4DNFIRWIAHMC.fastq.gz", "accession": "4DNFIRWIAHMC", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 384917771, "display_title": "4DNFIRWIAHMC.fastq.gz", "uuid": "53e15882-9615-458c-b246-92d8113764cc", "upload_key": "53e15882-9615-458c-b246-92d8113764cc/4DNFIRWIAHMC.fastq.gz", "dbxrefs": ["SRA:SRR5938712"], "@id": "/files-fastq/4DNFIRWIAHMC/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "8e4fb835-59b6-459f-8d84-212a32f1f059", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIRWIAHMC/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/8e4fb835-59b6-459f-8d84-212a32f1f059/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFI4N4HQBO/", "file_type": "reads", "paired_end": "2", "accession": "4DNFI4N4HQBO", "display_title": "4DNFI4N4HQBO.fastq.gz", "uuid": "e9eaf811-3399-4a54-82e1-d13a8b630528", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938712", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938712"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFI4N4HQBO/@@download/4DNFI4N4HQBO.fastq.gz", "accession": "4DNFI4N4HQBO", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 348561166, "display_title": "4DNFI4N4HQBO.fastq.gz", "uuid": "e9eaf811-3399-4a54-82e1-d13a8b630528", "upload_key": "e9eaf811-3399-4a54-82e1-d13a8b630528/4DNFI4N4HQBO.fastq.gz", "dbxrefs": ["SRA:SRR5938712"], "@id": "/files-fastq/4DNFI4N4HQBO/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "4404ef0a-443d-439d-a877-cf95cacd4204", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI4N4HQBO/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/4404ef0a-443d-439d-a877-cf95cacd4204/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIRWIAHMC/", "file_type": "reads", "paired_end": "1", "accession": "4DNFIRWIAHMC", "display_title": "4DNFIRWIAHMC.fastq.gz", "uuid": "53e15882-9615-458c-b246-92d8113764cc", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938712", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938712"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIIE8ZLAJ/@@download/4DNFIIE8ZLAJ.fastq.gz", "accession": "4DNFIIE8ZLAJ", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 398970470, "display_title": "4DNFIIE8ZLAJ.fastq.gz", "uuid": "db822216-8d11-4bfb-8d26-6daf6be9898c", "upload_key": "db822216-8d11-4bfb-8d26-6daf6be9898c/4DNFIIE8ZLAJ.fastq.gz", "dbxrefs": ["SRA:SRR5938713"], "@id": "/files-fastq/4DNFIIE8ZLAJ/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "a5189b83-4a7b-4717-9911-85e2c0edbce1", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-14", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIIE8ZLAJ/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/a5189b83-4a7b-4717-9911-85e2c0edbce1/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFILIMS2U3/", "file_type": "reads", "paired_end": "2", "accession": "4DNFILIMS2U3", "display_title": "4DNFILIMS2U3.fastq.gz", "uuid": "5bb6e000-cf40-4f7c-aee1-293dac073088", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938713", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938713"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFILIMS2U3/@@download/4DNFILIMS2U3.fastq.gz", "accession": "4DNFILIMS2U3", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 353621870, "display_title": "4DNFILIMS2U3.fastq.gz", "uuid": "5bb6e000-cf40-4f7c-aee1-293dac073088", "upload_key": "5bb6e000-cf40-4f7c-aee1-293dac073088/4DNFILIMS2U3.fastq.gz", "dbxrefs": ["SRA:SRR5938713"], "@id": "/files-fastq/4DNFILIMS2U3/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "66c9803e-bf9d-4768-a569-78068f566f59", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-14", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFILIMS2U3/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/66c9803e-bf9d-4768-a569-78068f566f59/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIIE8ZLAJ/", "file_type": "reads", "paired_end": "1", "accession": "4DNFIIE8ZLAJ", "display_title": "4DNFIIE8ZLAJ.fastq.gz", "uuid": "db822216-8d11-4bfb-8d26-6daf6be9898c", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938713", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938713"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFI8Y84IJW/@@download/4DNFI8Y84IJW.fastq.gz", "accession": "4DNFI8Y84IJW", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 377585679, "display_title": "4DNFI8Y84IJW.fastq.gz", "uuid": "9b207b3b-4fbd-4154-a645-8b66c06c05b2", "upload_key": "9b207b3b-4fbd-4154-a645-8b66c06c05b2/4DNFI8Y84IJW.fastq.gz", "dbxrefs": ["SRA:SRR5938714"], "@id": "/files-fastq/4DNFI8Y84IJW/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "bc1e7b14-ff9d-4c6e-9bd4-5fa8bdc823e5", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI8Y84IJW/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/bc1e7b14-ff9d-4c6e-9bd4-5fa8bdc823e5/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIV5FBLOM/", "file_type": "reads", "paired_end": "2", "accession": "4DNFIV5FBLOM", "display_title": "4DNFIV5FBLOM.fastq.gz", "uuid": "3e114ac5-5c7d-4a9c-af26-034f647d6817", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938714", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938714"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIV5FBLOM/@@download/4DNFIV5FBLOM.fastq.gz", "accession": "4DNFIV5FBLOM", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 357629015, "display_title": "4DNFIV5FBLOM.fastq.gz", "uuid": "3e114ac5-5c7d-4a9c-af26-034f647d6817", "upload_key": "3e114ac5-5c7d-4a9c-af26-034f647d6817/4DNFIV5FBLOM.fastq.gz", "dbxrefs": ["SRA:SRR5938714"], "@id": "/files-fastq/4DNFIV5FBLOM/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "63a6332a-f882-40d5-81e0-e38a26fabadd", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIV5FBLOM/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/63a6332a-f882-40d5-81e0-e38a26fabadd/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFI8Y84IJW/", "file_type": "reads", "paired_end": "1", "accession": "4DNFI8Y84IJW", "display_title": "4DNFI8Y84IJW.fastq.gz", "uuid": "9b207b3b-4fbd-4154-a645-8b66c06c05b2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938714", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938714"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFI3OC6TIL/@@download/4DNFI3OC6TIL.fastq.gz", "accession": "4DNFI3OC6TIL", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 377352034, "display_title": "4DNFI3OC6TIL.fastq.gz", "uuid": "1d6a4462-d4a7-4c45-8178-263df44f1221", "upload_key": "1d6a4462-d4a7-4c45-8178-263df44f1221/4DNFI3OC6TIL.fastq.gz", "dbxrefs": ["SRA:SRR5938715"], "@id": "/files-fastq/4DNFI3OC6TIL/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "a0c83f0d-84a8-49ce-b1f0-2af90165e74d", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI3OC6TIL/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/a0c83f0d-84a8-49ce-b1f0-2af90165e74d/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFI2R3QMSO/", "file_type": "reads", "paired_end": "2", "accession": "4DNFI2R3QMSO", "display_title": "4DNFI2R3QMSO.fastq.gz", "uuid": "cf249fb3-00a1-448d-b1d3-1e3df1301fef", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938715", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938715"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFI2R3QMSO/@@download/4DNFI2R3QMSO.fastq.gz", "accession": "4DNFI2R3QMSO", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 334039083, "display_title": "4DNFI2R3QMSO.fastq.gz", "uuid": "cf249fb3-00a1-448d-b1d3-1e3df1301fef", "upload_key": "cf249fb3-00a1-448d-b1d3-1e3df1301fef/4DNFI2R3QMSO.fastq.gz", "dbxrefs": ["SRA:SRR5938715"], "@id": "/files-fastq/4DNFI2R3QMSO/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "83f24ed9-390d-4841-8c8d-764cd1e8836f", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI2R3QMSO/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/83f24ed9-390d-4841-8c8d-764cd1e8836f/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFI3OC6TIL/", "file_type": "reads", "paired_end": "1", "accession": "4DNFI3OC6TIL", "display_title": "4DNFI3OC6TIL.fastq.gz", "uuid": "1d6a4462-d4a7-4c45-8178-263df44f1221", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938715", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938715"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFI1V3C4D3/@@download/4DNFI1V3C4D3.fastq.gz", "accession": "4DNFI1V3C4D3", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 402717138, "display_title": "4DNFI1V3C4D3.fastq.gz", "uuid": "16343925-ccfd-453f-8d26-bffab37804ae", "upload_key": "16343925-ccfd-453f-8d26-bffab37804ae/4DNFI1V3C4D3.fastq.gz", "dbxrefs": ["SRA:SRR5938716"], "@id": "/files-fastq/4DNFI1V3C4D3/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "9db49708-7583-4f08-a6a6-8e4ac94edae8", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI1V3C4D3/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/9db49708-7583-4f08-a6a6-8e4ac94edae8/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFID1FU89G/", "file_type": "reads", "paired_end": "2", "accession": "4DNFID1FU89G", "display_title": "4DNFID1FU89G.fastq.gz", "uuid": "69cffaa2-0d98-4bac-a905-81af5249575e", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938716", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938716"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFID1FU89G/@@download/4DNFID1FU89G.fastq.gz", "accession": "4DNFID1FU89G", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 359925880, "display_title": "4DNFID1FU89G.fastq.gz", "uuid": "69cffaa2-0d98-4bac-a905-81af5249575e", "upload_key": "69cffaa2-0d98-4bac-a905-81af5249575e/4DNFID1FU89G.fastq.gz", "dbxrefs": ["SRA:SRR5938716"], "@id": "/files-fastq/4DNFID1FU89G/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "30010f4e-b6cd-42d4-bc56-14d8aa2736e2", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-14", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFID1FU89G/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/30010f4e-b6cd-42d4-bc56-14d8aa2736e2/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFI1V3C4D3/", "file_type": "reads", "paired_end": "1", "accession": "4DNFI1V3C4D3", "display_title": "4DNFI1V3C4D3.fastq.gz", "uuid": "16343925-ccfd-453f-8d26-bffab37804ae", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938716", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938716"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFITQKSL4C/@@download/4DNFITQKSL4C.fastq.gz", "accession": "4DNFITQKSL4C", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 406432751, "display_title": "4DNFITQKSL4C.fastq.gz", "uuid": "e1aa0295-10be-4927-b1ee-63555968a272", "upload_key": "e1aa0295-10be-4927-b1ee-63555968a272/4DNFITQKSL4C.fastq.gz", "dbxrefs": ["SRA:SRR5938717"], "@id": "/files-fastq/4DNFITQKSL4C/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "3bda26cd-e43a-473c-9788-6d4b038286c7", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFITQKSL4C/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/3bda26cd-e43a-473c-9788-6d4b038286c7/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIMYVFSCV/", "file_type": "reads", "paired_end": "2", "accession": "4DNFIMYVFSCV", "display_title": "4DNFIMYVFSCV.fastq.gz", "uuid": "79579527-022a-4e29-a6b6-c952da77d4a1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938717", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938717"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIMYVFSCV/@@download/4DNFIMYVFSCV.fastq.gz", "accession": "4DNFIMYVFSCV", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 362815940, "display_title": "4DNFIMYVFSCV.fastq.gz", "uuid": "79579527-022a-4e29-a6b6-c952da77d4a1", "upload_key": "79579527-022a-4e29-a6b6-c952da77d4a1/4DNFIMYVFSCV.fastq.gz", "dbxrefs": ["SRA:SRR5938717"], "@id": "/files-fastq/4DNFIMYVFSCV/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "16337ad3-7b59-4539-bac5-8663b7b2730c", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIMYVFSCV/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/16337ad3-7b59-4539-bac5-8663b7b2730c/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFITQKSL4C/", "file_type": "reads", "paired_end": "1", "accession": "4DNFITQKSL4C", "display_title": "4DNFITQKSL4C.fastq.gz", "uuid": "e1aa0295-10be-4927-b1ee-63555968a272", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938717", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938717"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIYW9ZBU6/@@download/4DNFIYW9ZBU6.fastq.gz", "accession": "4DNFIYW9ZBU6", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 404904130, "display_title": "4DNFIYW9ZBU6.fastq.gz", "uuid": "91ae4966-b4bb-47d7-b302-17bb3ad55580", "upload_key": "91ae4966-b4bb-47d7-b302-17bb3ad55580/4DNFIYW9ZBU6.fastq.gz", "dbxrefs": ["SRA:SRR5938718"], "@id": "/files-fastq/4DNFIYW9ZBU6/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "415be7c1-4a7c-428c-9010-80d4b149fa70", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIYW9ZBU6/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/415be7c1-4a7c-428c-9010-80d4b149fa70/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFILESFF28/", "file_type": "reads", "paired_end": "2", "accession": "4DNFILESFF28", "display_title": "4DNFILESFF28.fastq.gz", "uuid": "f7953679-5135-424c-adcf-56abadb7e2ce", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938718", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938718"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFILESFF28/@@download/4DNFILESFF28.fastq.gz", "accession": "4DNFILESFF28", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 364771590, "display_title": "4DNFILESFF28.fastq.gz", "uuid": "f7953679-5135-424c-adcf-56abadb7e2ce", "upload_key": "f7953679-5135-424c-adcf-56abadb7e2ce/4DNFILESFF28.fastq.gz", "dbxrefs": ["SRA:SRR5938718"], "@id": "/files-fastq/4DNFILESFF28/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "67ad13fc-6d7f-42c2-aeae-9f633c860745", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFILESFF28/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/67ad13fc-6d7f-42c2-aeae-9f633c860745/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIYW9ZBU6/", "file_type": "reads", "paired_end": "1", "accession": "4DNFIYW9ZBU6", "display_title": "4DNFIYW9ZBU6.fastq.gz", "uuid": "91ae4966-b4bb-47d7-b302-17bb3ad55580", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938718", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938718"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIE6LRX3B/@@download/4DNFIE6LRX3B.fastq.gz", "accession": "4DNFIE6LRX3B", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 386003673, "display_title": "4DNFIE6LRX3B.fastq.gz", "uuid": "e2557676-5d2f-4a16-bde1-ab80896a96bc", "upload_key": "e2557676-5d2f-4a16-bde1-ab80896a96bc/4DNFIE6LRX3B.fastq.gz", "dbxrefs": ["SRA:SRR5938719"], "@id": "/files-fastq/4DNFIE6LRX3B/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "d653d149-3a3c-482d-aaf9-07b925a1d720", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIE6LRX3B/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/d653d149-3a3c-482d-aaf9-07b925a1d720/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIM9OE7G3/", "file_type": "reads", "paired_end": "2", "accession": "4DNFIM9OE7G3", "display_title": "4DNFIM9OE7G3.fastq.gz", "uuid": "4793af5f-be51-4727-ac89-e81fdbf0e2df", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938719", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938719"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIM9OE7G3/@@download/4DNFIM9OE7G3.fastq.gz", "accession": "4DNFIM9OE7G3", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 371659274, "display_title": "4DNFIM9OE7G3.fastq.gz", "uuid": "4793af5f-be51-4727-ac89-e81fdbf0e2df", "upload_key": "4793af5f-be51-4727-ac89-e81fdbf0e2df/4DNFIM9OE7G3.fastq.gz", "dbxrefs": ["SRA:SRR5938719"], "@id": "/files-fastq/4DNFIM9OE7G3/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "b4ceae46-36e6-4101-9154-108ebe098dc0", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIM9OE7G3/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/b4ceae46-36e6-4101-9154-108ebe098dc0/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIE6LRX3B/", "file_type": "reads", "paired_end": "1", "accession": "4DNFIE6LRX3B", "display_title": "4DNFIE6LRX3B.fastq.gz", "uuid": "e2557676-5d2f-4a16-bde1-ab80896a96bc", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938719", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938719"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFINA43A1R/@@download/4DNFINA43A1R.fastq.gz", "accession": "4DNFINA43A1R", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 319013443, "display_title": "4DNFINA43A1R.fastq.gz", "uuid": "8b558ea0-e47b-4263-8d8f-66be99c4a9be", "upload_key": "8b558ea0-e47b-4263-8d8f-66be99c4a9be/4DNFINA43A1R.fastq.gz", "dbxrefs": ["SRA:SRR5938720"], "@id": "/files-fastq/4DNFINA43A1R/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "4def880b-c91a-4511-9378-3cf3fa583790", "Total Sequences": 3268933, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFINA43A1R/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/4def880b-c91a-4511-9378-3cf3fa583790/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIP4JN96B/", "file_type": "reads", "paired_end": "2", "accession": "4DNFIP4JN96B", "display_title": "4DNFIP4JN96B.fastq.gz", "uuid": "6fbb8133-2276-4330-8032-a3d388a3a662", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938720", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938720"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIP4JN96B/@@download/4DNFIP4JN96B.fastq.gz", "accession": "4DNFIP4JN96B", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 310690681, "display_title": "4DNFIP4JN96B.fastq.gz", "uuid": "6fbb8133-2276-4330-8032-a3d388a3a662", "upload_key": "6fbb8133-2276-4330-8032-a3d388a3a662/4DNFIP4JN96B.fastq.gz", "dbxrefs": ["SRA:SRR5938720"], "@id": "/files-fastq/4DNFIP4JN96B/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "674320d8-0740-4fae-9bdb-f1ba3ddf6dc3", "Total Sequences": 3268933, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-15", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIP4JN96B/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/674320d8-0740-4fae-9bdb-f1ba3ddf6dc3/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFINA43A1R/", "file_type": "reads", "paired_end": "1", "accession": "4DNFINA43A1R", "display_title": "4DNFINA43A1R.fastq.gz", "uuid": "8b558ea0-e47b-4263-8d8f-66be99c4a9be", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938720", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938720"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFI2DJH2DI/@@download/4DNFI2DJH2DI.fastq.gz", "accession": "4DNFI2DJH2DI", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 407836718, "display_title": "4DNFI2DJH2DI.fastq.gz", "uuid": "05fcc530-9905-4a5f-84c3-f2d68b49a3c2", "upload_key": "05fcc530-9905-4a5f-84c3-f2d68b49a3c2/4DNFI2DJH2DI.fastq.gz", "dbxrefs": ["SRA:SRR5938721"], "@id": "/files-fastq/4DNFI2DJH2DI/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "3afae3dd-abff-4383-baa0-dcdd480738a0", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-14", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI2DJH2DI/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/3afae3dd-abff-4383-baa0-dcdd480738a0/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIJ62I2ZD/", "file_type": "reads", "paired_end": "2", "accession": "4DNFIJ62I2ZD", "display_title": "4DNFIJ62I2ZD.fastq.gz", "uuid": "53ef6e9f-d5d6-413c-b7c4-cfc8a67c0fb6", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938721", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938721"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIJ62I2ZD/@@download/4DNFIJ62I2ZD.fastq.gz", "accession": "4DNFIJ62I2ZD", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 366121453, "display_title": "4DNFIJ62I2ZD.fastq.gz", "uuid": "53ef6e9f-d5d6-413c-b7c4-cfc8a67c0fb6", "upload_key": "53ef6e9f-d5d6-413c-b7c4-cfc8a67c0fb6/4DNFIJ62I2ZD.fastq.gz", "dbxrefs": ["SRA:SRR5938721"], "@id": "/files-fastq/4DNFIJ62I2ZD/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "505042dd-1282-4f62-9d80-5f3aee6c287e", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-14", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIJ62I2ZD/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/505042dd-1282-4f62-9d80-5f3aee6c287e/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFI2DJH2DI/", "file_type": "reads", "paired_end": "1", "accession": "4DNFI2DJH2DI", "display_title": "4DNFI2DJH2DI.fastq.gz", "uuid": "05fcc530-9905-4a5f-84c3-f2d68b49a3c2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938721", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938721"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIS9SBZHA/@@download/4DNFIS9SBZHA.fastq.gz", "accession": "4DNFIS9SBZHA", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 410352310, "display_title": "4DNFIS9SBZHA.fastq.gz", "uuid": "6e294b0c-40c3-42bd-884e-6662c12a0843", "upload_key": "6e294b0c-40c3-42bd-884e-6662c12a0843/4DNFIS9SBZHA.fastq.gz", "dbxrefs": ["SRA:SRR5938722"], "@id": "/files-fastq/4DNFIS9SBZHA/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "4a0c3a8f-ae65-4ad4-831a-77c29412b4c4", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-14", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIS9SBZHA/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/4a0c3a8f-ae65-4ad4-831a-77c29412b4c4/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFITB6AT7D/", "file_type": "reads", "paired_end": "2", "accession": "4DNFITB6AT7D", "display_title": "4DNFITB6AT7D.fastq.gz", "uuid": "813ee6bd-4982-4bd9-9c68-fbd5023902c8", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938722", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938722"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFITB6AT7D/@@download/4DNFITB6AT7D.fastq.gz", "accession": "4DNFITB6AT7D", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 371668737, "display_title": "4DNFITB6AT7D.fastq.gz", "uuid": "813ee6bd-4982-4bd9-9c68-fbd5023902c8", "upload_key": "813ee6bd-4982-4bd9-9c68-fbd5023902c8/4DNFITB6AT7D.fastq.gz", "dbxrefs": ["SRA:SRR5938722"], "@id": "/files-fastq/4DNFITB6AT7D/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "dab093a6-0fe0-47e9-8e19-3c0a0c37b90a", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-14", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFITB6AT7D/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/dab093a6-0fe0-47e9-8e19-3c0a0c37b90a/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIS9SBZHA/", "file_type": "reads", "paired_end": "1", "accession": "4DNFIS9SBZHA", "display_title": "4DNFIS9SBZHA.fastq.gz", "uuid": "6e294b0c-40c3-42bd-884e-6662c12a0843", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938722", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938722"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIU46LPJZ/@@download/4DNFIU46LPJZ.fastq.gz", "accession": "4DNFIU46LPJZ", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 412926196, "display_title": "4DNFIU46LPJZ.fastq.gz", "uuid": "d71e7884-df03-4cf4-9f2f-6fa436da2f35", "upload_key": "d71e7884-df03-4cf4-9f2f-6fa436da2f35/4DNFIU46LPJZ.fastq.gz", "dbxrefs": ["SRA:SRR5938723"], "@id": "/files-fastq/4DNFIU46LPJZ/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "0cb1541b-ef0a-4048-9d33-fc8cba5ce990", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-14", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIU46LPJZ/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/0cb1541b-ef0a-4048-9d33-fc8cba5ce990/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIIKFKHFU/", "file_type": "reads", "paired_end": "2", "accession": "4DNFIIKFKHFU", "display_title": "4DNFIIKFKHFU.fastq.gz", "uuid": "556d17e5-b2da-4287-853d-470ea3d1ea17", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938723", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938723"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIIKFKHFU/@@download/4DNFIIKFKHFU.fastq.gz", "accession": "4DNFIIKFKHFU", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 377122057, "display_title": "4DNFIIKFKHFU.fastq.gz", "uuid": "556d17e5-b2da-4287-853d-470ea3d1ea17", "upload_key": "556d17e5-b2da-4287-853d-470ea3d1ea17/4DNFIIKFKHFU.fastq.gz", "dbxrefs": ["SRA:SRR5938723"], "@id": "/files-fastq/4DNFIIKFKHFU/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "5aa05d65-78f5-4499-8986-ada9da61cba0", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-14", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIIKFKHFU/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/5aa05d65-78f5-4499-8986-ada9da61cba0/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIU46LPJZ/", "file_type": "reads", "paired_end": "1", "accession": "4DNFIU46LPJZ", "display_title": "4DNFIU46LPJZ.fastq.gz", "uuid": "d71e7884-df03-4cf4-9f2f-6fa436da2f35", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938723", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938723"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFI9ZUKNOX/@@download/4DNFI9ZUKNOX.fastq.gz", "accession": "4DNFI9ZUKNOX", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 406416096, "display_title": "4DNFI9ZUKNOX.fastq.gz", "uuid": "eae9bde6-1932-4d80-a6da-384ffdc87d1d", "upload_key": "eae9bde6-1932-4d80-a6da-384ffdc87d1d/4DNFI9ZUKNOX.fastq.gz", "dbxrefs": ["SRA:SRR5938724"], "@id": "/files-fastq/4DNFI9ZUKNOX/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "e160119b-093b-430c-98ad-83e0b23ad77c", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-14", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI9ZUKNOX/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/e160119b-093b-430c-98ad-83e0b23ad77c/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIBA9LJWS/", "file_type": "reads", "paired_end": "2", "accession": "4DNFIBA9LJWS", "display_title": "4DNFIBA9LJWS.fastq.gz", "uuid": "35e597d5-cfd2-4414-8b91-20ddb5d2b083", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938724", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938724"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIBA9LJWS/@@download/4DNFIBA9LJWS.fastq.gz", "accession": "4DNFIBA9LJWS", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 336795037, "display_title": "4DNFIBA9LJWS.fastq.gz", "uuid": "35e597d5-cfd2-4414-8b91-20ddb5d2b083", "upload_key": "35e597d5-cfd2-4414-8b91-20ddb5d2b083/4DNFIBA9LJWS.fastq.gz", "dbxrefs": ["SRA:SRR5938724"], "@id": "/files-fastq/4DNFIBA9LJWS/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "a3542351-8262-4168-88d3-0946e3d4cba2", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-14", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIBA9LJWS/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/a3542351-8262-4168-88d3-0946e3d4cba2/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFI9ZUKNOX/", "file_type": "reads", "paired_end": "1", "accession": "4DNFI9ZUKNOX", "display_title": "4DNFI9ZUKNOX.fastq.gz", "uuid": "eae9bde6-1932-4d80-a6da-384ffdc87d1d", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938724", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938724"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIB696KR2/@@download/4DNFIB696KR2.fastq.gz", "accession": "4DNFIB696KR2", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "1", "file_size": 382534240, "display_title": "4DNFIB696KR2.fastq.gz", "uuid": "aef7ec8e-078a-49e1-9d64-80dda85ead69", "upload_key": "aef7ec8e-078a-49e1-9d64-80dda85ead69/4DNFIB696KR2.fastq.gz", "dbxrefs": ["SRA:SRR5938725"], "@id": "/files-fastq/4DNFIB696KR2/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "80cedc05-a622-43ee-a0c4-a1fc31462f06", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-14", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIB696KR2/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/80cedc05-a622-43ee-a0c4-a1fc31462f06/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIYE6Z72Z/", "file_type": "reads", "paired_end": "2", "accession": "4DNFIYE6Z72Z", "display_title": "4DNFIYE6Z72Z.fastq.gz", "uuid": "a897b690-62fc-4b8e-b084-1a5c293f05c6", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938725", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938725"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"file_type_detailed": "reads (fastq)", "@type": ["FileFastq", "File", "Item"], "href": "/files-fastq/4DNFIYE6Z72Z/@@download/4DNFIYE6Z72Z.fastq.gz", "accession": "4DNFIYE6Z72Z", "file_classification": "raw file", "status": "released", "file_type": "reads", "paired_end": "2", "file_size": 333638668, "display_title": "4DNFIYE6Z72Z.fastq.gz", "uuid": "a897b690-62fc-4b8e-b084-1a5c293f05c6", "upload_key": "a897b690-62fc-4b8e-b084-1a5c293f05c6/4DNFIYE6Z72Z.fastq.gz", "dbxrefs": ["SRA:SRR5938725"], "@id": "/files-fastq/4DNFIYE6Z72Z/", "quality_metric": {"@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "uuid": "9ad659be-f6c3-4147-8aa8-bda8bca733ad", "Total Sequences": 4000000, "overall_quality_status": "PASS", "Sequence length": "100", "display_title": "QualityMetricFastqc from 2018-11-14", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIYE6Z72Z/fastqc_report.html", "status": "released", "@id": "/quality-metrics-fastqc/9ad659be-f6c3-4147-8aa8-bda8bca733ad/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"status": "released", "@id": "/files-fastq/4DNFIB696KR2/", "file_type": "reads", "paired_end": "1", "accession": "4DNFIB696KR2", "display_title": "4DNFIB696KR2.fastq.gz", "uuid": "aef7ec8e-078a-49e1-9d64-80dda85ead69", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"status": "released", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "@id": "/file-formats/fastq/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938725", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938725"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "status": "released", "aliases": ["4dn-dcic-lab:GSM2745846"], "dbxrefs": ["GEO:GSM2745846"], "protocol": {"status": "released", "uuid": "e89ce7e7-92ba-4af4-b910-74b269c0e845", "@type": ["Protocol", "Item"], "display_title": "GSE102740_hic_protocol.pdf", "@id": "/protocols/e89ce7e7-92ba-4af4-b910-74b269c0e845/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "accession": "4DNEXAP42UGL", "biosample": {"biosource_summary": "DT40 with random integration of X. laevis Cdk1, CDK1 disruption", "@type": ["Biosample", "Item"], "display_title": "4DNBS9VZ9RW6", "@id": "/biosamples/4DNBS9VZ9RW6/", "modifications_summary": "None", "accession": "4DNBS9VZ9RW6", "treatments_summary": "1NM-PP1 treatment (2.0 \u03bcM, 10.0h)", "biosample_type": "immortalized cells", "uuid": "931bba12-a9f6-4df0-8e7e-aff4721a7e2b", "status": "released", "biosource": [{"lab": {"status": "current", "@id": "/labs/job-dekker-lab/", "display_title": "Job Dekker, UMMS", "@type": ["Lab", "Item"], "uuid": "3c577664-affb-41c4-bf27-9e21c2fc1554", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin", "role.lab_submitter", "submits_for.3c577664-affb-41c4-bf27-9e21c2fc1554"]}}, "award": {"uuid": "12a92962-8265-4fc0-b2f8-cf14f05db58b", "@type": ["Award", "Item"], "status": "current", "@id": "/awards/external-award/", "display_title": "EXTERNAL AWARD", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "status": "released", "tissue": {"@type": ["OntologyTerm", "Item"], "term_id": "UBERON:0003903", "preferred_name": "bursa of Fabricius", "uuid": "1bfd1088-3311-4711-8c41-83dbed3db972", "slim_terms": [{"@id": "/ontology-terms/UBERON:0001007/", "@type": ["OntologyTerm", "Item"], "status": "released", "display_title": "digestive system", "uuid": "111129bc-8535-4448-903e-854af460a233", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@id": "/ontology-terms/UBERON:0000926/", "@type": ["OntologyTerm", "Item"], "status": "released", "display_title": "mesoderm", "uuid": "111120bc-8535-4448-903e-854af460a233", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "@id": "/ontology-terms/UBERON:0003903/", "term_name": "bursa of Fabricius", "display_title": "bursa of Fabricius", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "aliases": ["4dn-dcic-lab:DT40-Cdk1as"], "accession": "4DNSRFB455CY", "cell_line": {"uuid": "fd057734-0765-4007-b7eb-d71ac7cbef65", "term_name": "DT40", "slim_terms": [{"display_title": "cell", "uuid": "72e16a19-eef3-46ca-a1b8-20e646e69675", "status": "current", "@type": ["OntologyTerm", "Item"], "@id": "/ontology-terms/GO:0005623/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"display_title": "cell", "uuid": "45d2b02e-130b-40db-8bf2-2288c6c57dcf", "status": "released", "@type": ["OntologyTerm", "Item"], "@id": "/ontology-terms/CL:0000000/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "display_title": "DT40", "term_id": "EFO:0006274", "@id": "/ontology-terms/EFO:0006274/", "preferred_name": "DT40", "status": "released", "@type": ["OntologyTerm", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "individual": {"status": "released", "@id": "/individuals-chicken/4DNINYWTTO3D/", "display_title": "4DNINYWTTO3D", "@type": ["IndividualChicken", "Individual", "Item"], "uuid": "836856fd-a0f7-4daf-afb2-4a098df8e8fc", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "description": "DT40 line expressing Cdk1as transgene, which renders it sensitive to inhibition by 1NM-PP1", "date_created": "2018-10-30T15:04:12.407677+00:00", "submitted_by": {"error": "no view permissions"}, "last_modified": {"modified_by": {"error": "no view permissions"}, "date_modified": "2019-10-11T22:24:13.955875+00:00"}, "modifications": [{"@id": "/modifications/4dca1ddb-ab74-44f5-ac84-738b0198886d/", "@type": ["Modification", "Item"], "uuid": "4dca1ddb-ab74-44f5-ac84-738b0198886d", "display_title": "random integration of X. laevis Cdk1", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@id": "/modifications/fb27fdf6-4199-4179-8bb0-6101b1404aee/", "@type": ["Modification", "Item"], "uuid": "fb27fdf6-4199-4179-8bb0-6101b1404aee", "display_title": "Crispr disruption for CDK1 chicken gene", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "biosource_type": "immortalized cell line", "cell_line_tier": "Unclassified", "public_release": "2019-10-11", "schema_version": "2", "project_release": "2019-10-11", "@id": "/biosources/4DNSRFB455CY/", "@type": ["Biosource", "Item"], "uuid": "bdb9d92e-1f52-4e84-a484-78e595791e5e", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "display_title": "DT40 with random integration of X. laevis Cdk1, CDK1 disruption - 4DNSRFB455CY", "external_references": [], "biosource_name": "DT40 with random integration of X. laevis Cdk1, CDK1 disruption", "biosource_category": ["Other"], "organism": {"status": "released", "display_title": "G. gallus", "@type": ["Organism", "Item"], "@id": "/organisms/9031/", "name": "chicken", "uuid": "fed8c206-762f-497f-821b-1c8ff7900bd2", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "badges": [{"messages": ["Biosample missing Cell Culture Details"], "badge": {"badge_classification": "Warning", "uuid": "2b2cc7ff-b7a8-4138-9a6c-22884fc71690", "status": "released", "title": "Biosample Metadata Incomplete", "description": "Biosample is missing metadata information required as part of the standards implemented by the 4DN Samples working group.", "badge_icon": "/static/img/badges/biosample-icon.svg", "display_title": "Biosample Metadata Incomplete", "warning": "Biosample Metadata Incomplete", "@type": ["Badge", "Item"], "@id": "/badges/biosample-metadata-incomplete/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "treatments": [{"@type": ["TreatmentAgent", "Treatment", "Item"], "concentration_units": "\u03bcM", "display_title": "1NM-PP1 treatment (2.0 \u03bcM, 10.0h)", "duration_units": "hour", "status": "released", "description": "Synchronization with 1NM-PP1 fo 10 hours", "duration": 10.0, "@id": "/treatments-agent/6600f226-5817-4bb8-afb5-c412a7b39058/", "uuid": "6600f226-5817-4bb8-afb5-c412a7b39058", "chemical": "1NM-PP1", "treatment_type": "Chemical", "concentration": 2.0, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "description": "20150609-G2-R1", "sop_mapping": {"has_sop": "No"}, "date_created": "2018-10-30T15:05:08.604852+00:00", "submitted_by": {"error": "no view permissions"}, "last_modified": {"modified_by": {"error": "no view permissions"}, "date_modified": "2019-10-11T20:55:24.883153+00:00"}, "ligation_time": 240.0, "biotin_removed": "Yes", "digestion_time": 960.0, "public_release": "2019-10-11", "schema_version": "2", "tagging_method": "biotin-dCTP", "experiment_type": {"@type": ["ExperimentType", "Item"], "title": "Dilution Hi-C", "status": "released", "@id": "/experiment-types/dilution-hi-c/", "experiment_category": "Sequencing", "uuid": "832b7989-69ab-4bb6-97b9-195d5dd965ea", "assay_subclass_short": "Hi-C", "display_title": "Dilution Hi-C", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "processed_files": [{"open_data_url": "https://4dn-open-data-public.s3.amazonaws.com/fourfront-webprod/wfoutput/ab2ceab5-f922-4daf-aae4-a05b08d7cad0/4DNFI3M6OPJ4.bam", "@type": ["FileProcessed", "File", "Item"], "@id": "/files-processed/4DNFI3M6OPJ4/", "display_title": "4DNFI3M6OPJ4.bam", "accession": "4DNFI3M6OPJ4", "uuid": "ab2ceab5-f922-4daf-aae4-a05b08d7cad0", "file_type": "alignments", "href": "/files-processed/4DNFI3M6OPJ4/@@download/4DNFI3M6OPJ4.bam", "upload_key": "ab2ceab5-f922-4daf-aae4-a05b08d7cad0/4DNFI3M6OPJ4.bam", "file_type_detailed": "alignments (bam)", "status": "released", "file_format": {"uuid": "d13d06cf-218e-4f61-aaf0-91f226248b3c", "@type": ["FileFormat", "Item"], "file_format": "bam", "status": "released", "display_title": "bam", "@id": "/file-formats/bam/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "file_size": 38972859844, "file_classification": "processed file", "quality_metric": {"uuid": "9b3bcf5f-b41a-421f-bb73-81a19e8bcc15", "overall_quality_status": "PASS", "@id": "/quality-metrics-bamqc/9b3bcf5f-b41a-421f-bb73-81a19e8bcc15/", "@type": ["QualityMetricBamqc", "QualityMetric", "Item"], "status": "released", "display_title": "QualityMetricBamqc from 2020-01-16", "quality_metric_summary": [{"title": "Total Reads", "value": "167268933", "numberType": "integer"}, {"title": "Unmapped Reads", "value": "12.89", "tooltip": "Percent of total reads (=21.56m)", "numberType": "percent"}, {"title": "Multimapped Reads", "value": "7.52", "tooltip": "Percent of total reads (=12.58m)", "numberType": "percent"}, {"title": "Duplicate Reads", "value": "9.556", "tooltip": "Percent of total reads (=15.98m)", "numberType": "percent"}, {"title": "Walks", "value": "4.219", "tooltip": "Percent of total reads (=7.06m)", "numberType": "percent"}, {"title": "Minor Contigs", "value": "0.436", "tooltip": "Percent of total reads (=0.73m)", "numberType": "percent"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "track_and_facet_info": {"experimental_lab": "Job Dekker, UMMS", "experiment_type": "Dilution Hi-C", "experiment_bucket": "processed file", "assay_info": "HindIII", "dataset": "HiC on sync. chicken cells", "condition": "G2 block", "replicate_info": "Biorep 2, Techrep 1", "biosource_name": "DT40 with random integration of X. laevis Cdk1, CDK1 disruption", "lab_name": "4DN DCIC, HMS"}, "external_references": []}, {"open_data_url": "https://4dn-open-data-public.s3.amazonaws.com/fourfront-webprod/wfoutput/b57e9632-69c6-4f86-bb48-ccd7e22debd6/4DNFIRQZT6FG.pairs.gz", "@type": ["FileProcessed", "File", "Item"], "@id": "/files-processed/4DNFIRQZT6FG/", "display_title": "4DNFIRQZT6FG.pairs.gz", "accession": "4DNFIRQZT6FG", "uuid": "b57e9632-69c6-4f86-bb48-ccd7e22debd6", "file_type": "contact list-replicate", "href": "/files-processed/4DNFIRQZT6FG/@@download/4DNFIRQZT6FG.pairs.gz", "upload_key": "b57e9632-69c6-4f86-bb48-ccd7e22debd6/4DNFIRQZT6FG.pairs.gz", "file_type_detailed": "contact list-replicate (pairs)", "status": "released", "file_format": {"uuid": "d13d06cf-218e-4f61-aaf0-91f226248b2c", "@type": ["FileFormat", "Item"], "file_format": "pairs", "status": "released", "display_title": "pairs", "@id": "/file-formats/pairs/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "file_size": 2008534544, "file_classification": "processed file", "quality_metric": {"uuid": "8eadde72-d907-440a-809e-805a18110dab", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIRQZT6FG/pairsqc_report.html", "@id": "/quality-metrics-pairsqc/8eadde72-d907-440a-809e-805a18110dab/", "Total reads": 110087555, "@type": ["QualityMetricPairsqc", "QualityMetric", "Item"], "status": "released", "display_title": "QualityMetricPairsqc from 2019-02-11", "quality_metric_summary": [{"title": "Filtered Reads", "value": "110087555", "numberType": "integer"}, {"title": "Cis reads (>20kb)", "value": "54.516", "tooltip": "Percent of filtered reads (=60.01m)", "numberType": "percent"}, {"title": "Short cis reads", "value": "28.663", "tooltip": "Percent of filtered reads (=31.55m)", "numberType": "percent"}, {"title": "Trans Reads", "value": "16.821", "tooltip": "Percent of filtered reads (=18.52m)", "numberType": "percent"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "track_and_facet_info": {"experimental_lab": "Job Dekker, UMMS", "experiment_type": "Dilution Hi-C", "experiment_bucket": "processed file", "assay_info": "HindIII", "dataset": "HiC on sync. chicken cells", "condition": "G2 block", "replicate_info": "Biorep 2, Techrep 1", "biosource_name": "DT40 with random integration of X. laevis Cdk1, CDK1 disruption", "lab_name": "4DN DCIC, HMS"}, "external_references": []}], "project_release": "2019-10-11", "digestion_enzyme": {"display_title": "HindIII", "uuid": "2ace2f00-c913-4bac-a6ef-0b316bc2108e", "@id": "/enzymes/HindIII/", "name": "HindIII", "@type": ["Enzyme", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "crosslinking_time": 10.0, "biosample_quantity": 13000000.0, "crosslinking_method": "1% Formaldehyde", "fragment_size_range": "150-350", "fragmentation_method": "sonication", "ligation_temperature": 16.0, "digestion_temperature": 37.0, "biosample_quantity_units": "cells", "crosslinking_temperature": 23.0, "library_preparation_date": "2015-06-09", "fragment_size_selection_method": "SPRI beads", "@id": "/experiments-hi-c/4DNEXAP42UGL/", "@type": ["ExperimentHiC", "Experiment", "Item"], "uuid": "5e33a4d1-cd48-41e9-94a4-8a050335ab6b", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "display_title": "Dilution Hi-C on DT40 with random integration of X. laevis Cdk1, CDK1 disruption with HindIII - 4DNEXAP42UGL", "external_references": [{"ref": "GEO:GSM2745846", "uri": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM2745846"}], "experiment_sets": [{"uuid": "e51ab8a8-19eb-4f72-b41c-127cce0b885a", "status": "released", "accession": "4DNES9LEZXN7", "display_title": "4DNES9LEZXN7", "@id": "/experiment-set-replicates/4DNES9LEZXN7/", "@type": ["ExperimentSetReplicate", "ExperimentSet", "Item"], "experimentset_type": "replicate", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "produced_in_pub": {"abstract": "Mitotic chromosomes fold as compact arrays of chromatin loops. To identify the pathway of mitotic chromosome formation, we combined imaging and Hi-C analysis of synchronous DT40 cell cultures with polymer simulations. Here we show that in prophase, the interphase organization is rapidly lost in a condensin-dependent manner, and arrays of consecutive 60-kilobase (kb) loops are formed. During prometaphase, ~80-kb inner loops are nested within ~400-kb outer loops. The loop  array acquires a helical arrangement with consecutive loops emanating from a central \"spiral staircase\" condensin scaffold. The size of helical turns progressively increases to ~12 megabases during prometaphase. Acute depletion of  condensin I or II shows that nested loops form by differential action of the two  condensins, whereas condensin II is required for helical winding.", "uuid": "84fa5633-aac7-4cb3-b53b-0f0234ea06dd", "short_attribution": "Gibcus JH et al. (2018)", "journal": "Science (New York, N.Y.)", "authors": ["Gibcus JH", "Samejima K", "Goloborodko A", "Samejima I", "Naumova N", "Nuebler J", "Kanemaki MT", "Xie L", "Paulson JR", "Earnshaw WC", "Mirny LA", "Dekker J"], "ID": "PMID:29348367", "@id": "/publications/84fa5633-aac7-4cb3-b53b-0f0234ea06dd/", "date_published": "2018-02-09", "display_title": "Gibcus JH et al. (2018) PMID:29348367", "title": "A pathway for mitotic chromosome formation.", "status": "current", "@type": ["Publication", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "publications_of_exp": [{"display_title": "Gibcus JH et al. (2018) PMID:29348367", "authors": ["Gibcus JH", "Samejima K", "Goloborodko A", "Samejima I", "Naumova N", "Nuebler J", "Kanemaki MT", "Xie L", "Paulson JR", "Earnshaw WC", "Mirny LA", "Dekker J"], "@type": ["Publication", "Item"], "date_published": "2018-02-09", "journal": "Science (New York, N.Y.)", "short_attribution": "Gibcus JH et al. (2018)", "ID": "PMID:29348367", "uuid": "84fa5633-aac7-4cb3-b53b-0f0234ea06dd", "abstract": "Mitotic chromosomes fold as compact arrays of chromatin loops. To identify the pathway of mitotic chromosome formation, we combined imaging and Hi-C analysis of synchronous DT40 cell cultures with polymer simulations. Here we show that in prophase, the interphase organization is rapidly lost in a condensin-dependent manner, and arrays of consecutive 60-kilobase (kb) loops are formed. During prometaphase, ~80-kb inner loops are nested within ~400-kb outer loops. The loop  array acquires a helical arrangement with consecutive loops emanating from a central \"spiral staircase\" condensin scaffold. The size of helical turns progressively increases to ~12 megabases during prometaphase. Acute depletion of  condensin I or II shows that nested loops form by differential action of the two  condensins, whereas condensin II is required for helical winding.", "status": "current", "@id": "/publications/84fa5633-aac7-4cb3-b53b-0f0234ea06dd/", "title": "A pathway for mitotic chromosome formation.", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "experiment_categorizer": {"field": "Enzyme", "value": "HindIII", "combined": "Enzyme: HindIII"}, "experiment_summary": "Dilution Hi-C on DT40 with random integration of X. laevis Cdk1, CDK1 disruption with HindIII", "@context": "/terms/", "aggregated-items": {"badges": [{"parent": "/biosamples/4DNBS9VZ9RW6/", "embedded_path": "biosample.badges", "item": {"messages": ["Biosample missing Cell Culture Details"], "badge": {"commendation": null, "warning": "Biosample Metadata Incomplete", "uuid": "2b2cc7ff-b7a8-4138-9a6c-22884fc71690", "@id": "/badges/biosample-metadata-incomplete/", "badge_icon": "/static/img/badges/biosample-icon.svg", "description": "Biosample is missing metadata information required as part of the standards implemented by the 4DN Samples working group."}}}]}, "validation-errors": []}