{"lab": {"correspondence": [{"contact_email": "am9iLmRla2tlckB1bWFzc21lZC5lZHU=", "@id": "/users/83b5073a-069b-4162-9b30-6f42d5551e34/", "display_title": "Job Dekker"}], "uuid": "3c577664-affb-41c4-bf27-9e21c2fc1554", "status": "current", "display_title": "Job Dekker, UMMS", "@type": ["Lab", "Item"], "title": "Job Dekker, UMMS", "@id": "/labs/job-dekker-lab/", "pi": {"error": "no view permissions"}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin", "role.lab_submitter", "submits_for.3c577664-affb-41c4-bf27-9e21c2fc1554"]}}, "award": {"display_title": "EXTERNAL AWARD", "status": "current", "name": "external-award", "project": "External", "description": "Funding source is from outside 4DN.", "@type": ["Award", "Item"], "uuid": "12a92962-8265-4fc0-b2f8-cf14f05db58b", "@id": "/awards/external-award/", "center": "External", "center_title": "External", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "files": [{"accession": "4DNFIMTQ1TVQ", "file_size": 403793684, "upload_key": "8bb88a39-b7a6-452d-a501-18fc5a87e1f3/4DNFIMTQ1TVQ.fastq.gz", "display_title": "4DNFIMTQ1TVQ.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIMTQ1TVQ/@@download/4DNFIMTQ1TVQ.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIMTQ1TVQ/", "dbxrefs": ["SRA:SRR5938793"], "uuid": "8bb88a39-b7a6-452d-a501-18fc5a87e1f3", "paired_end": "1", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "6c8d7f33-73cb-49c6-aa50-99d8d5e77d0d", "@id": "/files-fastq/4DNFIGGHPE2E/", "status": "released", "display_title": "4DNFIGGHPE2E.fastq.gz", "accession": "4DNFIGGHPE2E", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938793", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938793"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "cf5f527d-6626-4887-a8e3-99fb7e446c8d", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIMTQ1TVQ/fastqc_report.html", "@id": "/quality-metrics-fastqc/cf5f527d-6626-4887-a8e3-99fb7e446c8d/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIGGHPE2E", "file_size": 354672170, "upload_key": "6c8d7f33-73cb-49c6-aa50-99d8d5e77d0d/4DNFIGGHPE2E.fastq.gz", "display_title": "4DNFIGGHPE2E.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIGGHPE2E/@@download/4DNFIGGHPE2E.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIGGHPE2E/", "dbxrefs": ["SRA:SRR5938793"], "uuid": "6c8d7f33-73cb-49c6-aa50-99d8d5e77d0d", "paired_end": "2", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "8bb88a39-b7a6-452d-a501-18fc5a87e1f3", "@id": "/files-fastq/4DNFIMTQ1TVQ/", "status": "released", "display_title": "4DNFIMTQ1TVQ.fastq.gz", "accession": "4DNFIMTQ1TVQ", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938793", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938793"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "0b301d70-9d27-4474-9448-4e0f8fe88b75", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIGGHPE2E/fastqc_report.html", "@id": "/quality-metrics-fastqc/0b301d70-9d27-4474-9448-4e0f8fe88b75/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIUBJYKH5", "file_size": 396297444, "upload_key": "b74ff2df-9c0e-481a-b516-1a5ab04ed6a3/4DNFIUBJYKH5.fastq.gz", "display_title": "4DNFIUBJYKH5.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIUBJYKH5/@@download/4DNFIUBJYKH5.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIUBJYKH5/", "dbxrefs": ["SRA:SRR5938790"], "uuid": "b74ff2df-9c0e-481a-b516-1a5ab04ed6a3", "paired_end": "1", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "dd3dec47-75ff-4291-ba81-64c014e555e9", "@id": "/files-fastq/4DNFIIQWU99N/", "status": "released", "display_title": "4DNFIIQWU99N.fastq.gz", "accession": "4DNFIIQWU99N", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938790", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938790"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "a653fa67-d730-4daa-8dfa-f67db2b5828f", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIUBJYKH5/fastqc_report.html", "@id": "/quality-metrics-fastqc/a653fa67-d730-4daa-8dfa-f67db2b5828f/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIIQWU99N", "file_size": 329843102, "upload_key": "dd3dec47-75ff-4291-ba81-64c014e555e9/4DNFIIQWU99N.fastq.gz", "display_title": "4DNFIIQWU99N.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIIQWU99N/@@download/4DNFIIQWU99N.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIIQWU99N/", "dbxrefs": ["SRA:SRR5938790"], "uuid": "dd3dec47-75ff-4291-ba81-64c014e555e9", "paired_end": "2", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "b74ff2df-9c0e-481a-b516-1a5ab04ed6a3", "@id": "/files-fastq/4DNFIUBJYKH5/", "status": "released", "display_title": "4DNFIUBJYKH5.fastq.gz", "accession": "4DNFIUBJYKH5", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938790", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938790"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "f19f451a-3692-4648-b6b5-bddc64645bc0", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIIQWU99N/fastqc_report.html", "@id": "/quality-metrics-fastqc/f19f451a-3692-4648-b6b5-bddc64645bc0/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIJ96IL3Y", "file_size": 396407675, "upload_key": "9d04e3c6-8e49-4016-8f2a-4adce3d1f57a/4DNFIJ96IL3Y.fastq.gz", "display_title": "4DNFIJ96IL3Y.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIJ96IL3Y/@@download/4DNFIJ96IL3Y.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIJ96IL3Y/", "dbxrefs": ["SRA:SRR5938789"], "uuid": "9d04e3c6-8e49-4016-8f2a-4adce3d1f57a", "paired_end": "1", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "b41a1fea-8c03-4b84-934c-cd109b4497ee", "@id": "/files-fastq/4DNFIV89PITC/", "status": "released", "display_title": "4DNFIV89PITC.fastq.gz", "accession": "4DNFIV89PITC", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938789", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938789"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "e859f3b8-ef22-40ae-a406-a24454c136c0", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIJ96IL3Y/fastqc_report.html", "@id": "/quality-metrics-fastqc/e859f3b8-ef22-40ae-a406-a24454c136c0/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIV89PITC", "file_size": 328649758, "upload_key": "b41a1fea-8c03-4b84-934c-cd109b4497ee/4DNFIV89PITC.fastq.gz", "display_title": "4DNFIV89PITC.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIV89PITC/@@download/4DNFIV89PITC.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIV89PITC/", "dbxrefs": ["SRA:SRR5938789"], "uuid": "b41a1fea-8c03-4b84-934c-cd109b4497ee", "paired_end": "2", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "9d04e3c6-8e49-4016-8f2a-4adce3d1f57a", "@id": "/files-fastq/4DNFIJ96IL3Y/", "status": "released", "display_title": "4DNFIJ96IL3Y.fastq.gz", "accession": "4DNFIJ96IL3Y", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938789", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938789"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "5c5fc8e7-abfc-4d3e-9d36-00b57db06498", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIV89PITC/fastqc_report.html", "@id": "/quality-metrics-fastqc/5c5fc8e7-abfc-4d3e-9d36-00b57db06498/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIGUDV9O5", "file_size": 403295581, "upload_key": "27a5b658-2b0e-481d-840a-8b061ed524da/4DNFIGUDV9O5.fastq.gz", "display_title": "4DNFIGUDV9O5.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIGUDV9O5/@@download/4DNFIGUDV9O5.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIGUDV9O5/", "dbxrefs": ["SRA:SRR5938787"], "uuid": "27a5b658-2b0e-481d-840a-8b061ed524da", "paired_end": "1", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "7606d4d6-9ed3-4da8-b3a8-8ff85a46cfc8", "@id": "/files-fastq/4DNFIPWU5YYL/", "status": "released", "display_title": "4DNFIPWU5YYL.fastq.gz", "accession": "4DNFIPWU5YYL", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938787", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938787"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "fb84b3e5-6a58-4c33-92a2-e9dce6a4515e", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIGUDV9O5/fastqc_report.html", "@id": "/quality-metrics-fastqc/fb84b3e5-6a58-4c33-92a2-e9dce6a4515e/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIPWU5YYL", "file_size": 343012386, "upload_key": "7606d4d6-9ed3-4da8-b3a8-8ff85a46cfc8/4DNFIPWU5YYL.fastq.gz", "display_title": "4DNFIPWU5YYL.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIPWU5YYL/@@download/4DNFIPWU5YYL.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIPWU5YYL/", "dbxrefs": ["SRA:SRR5938787"], "uuid": "7606d4d6-9ed3-4da8-b3a8-8ff85a46cfc8", "paired_end": "2", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "27a5b658-2b0e-481d-840a-8b061ed524da", "@id": "/files-fastq/4DNFIGUDV9O5/", "status": "released", "display_title": "4DNFIGUDV9O5.fastq.gz", "accession": "4DNFIGUDV9O5", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938787", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938787"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "0dad83ca-fdd5-4d6c-a512-3ce06fd66fd9", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIPWU5YYL/fastqc_report.html", "@id": "/quality-metrics-fastqc/0dad83ca-fdd5-4d6c-a512-3ce06fd66fd9/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIPXPWN86", "file_size": 401556571, "upload_key": "45abf9c0-2b01-4ca5-8bcd-3c49eb7e0e6c/4DNFIPXPWN86.fastq.gz", "display_title": "4DNFIPXPWN86.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIPXPWN86/@@download/4DNFIPXPWN86.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIPXPWN86/", "dbxrefs": ["SRA:SRR5938786"], "uuid": "45abf9c0-2b01-4ca5-8bcd-3c49eb7e0e6c", "paired_end": "1", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "b06cd97c-e82d-4405-a4a6-337e08ee3b87", "@id": "/files-fastq/4DNFIASHJIVM/", "status": "released", "display_title": "4DNFIASHJIVM.fastq.gz", "accession": "4DNFIASHJIVM", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938786", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938786"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "1839482d-c313-44e0-be49-f21b8844dac6", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIPXPWN86/fastqc_report.html", "@id": "/quality-metrics-fastqc/1839482d-c313-44e0-be49-f21b8844dac6/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIASHJIVM", "file_size": 360056838, "upload_key": "b06cd97c-e82d-4405-a4a6-337e08ee3b87/4DNFIASHJIVM.fastq.gz", "display_title": "4DNFIASHJIVM.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIASHJIVM/@@download/4DNFIASHJIVM.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIASHJIVM/", "dbxrefs": ["SRA:SRR5938786"], "uuid": "b06cd97c-e82d-4405-a4a6-337e08ee3b87", "paired_end": "2", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "45abf9c0-2b01-4ca5-8bcd-3c49eb7e0e6c", "@id": "/files-fastq/4DNFIPXPWN86/", "status": "released", "display_title": "4DNFIPXPWN86.fastq.gz", "accession": "4DNFIPXPWN86", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938786", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938786"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "90006de9-94d4-4c0f-ac1a-698b98c87e06", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIASHJIVM/fastqc_report.html", "@id": "/quality-metrics-fastqc/90006de9-94d4-4c0f-ac1a-698b98c87e06/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFI7NPI4NV", "file_size": 398351556, "upload_key": "b680e7ad-867d-4def-b7df-0447dbdef7eb/4DNFI7NPI4NV.fastq.gz", "display_title": "4DNFI7NPI4NV.fastq.gz", "status": "released", "href": "/files-fastq/4DNFI7NPI4NV/@@download/4DNFI7NPI4NV.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFI7NPI4NV/", "dbxrefs": ["SRA:SRR5938785"], "uuid": "b680e7ad-867d-4def-b7df-0447dbdef7eb", "paired_end": "1", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "a5b3d85f-d2a7-4720-86dd-977f606f6b26", "@id": "/files-fastq/4DNFIU2BR8HM/", "status": "released", "display_title": "4DNFIU2BR8HM.fastq.gz", "accession": "4DNFIU2BR8HM", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938785", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938785"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "353e9b24-51a0-4858-b1aa-4455584bfa97", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI7NPI4NV/fastqc_report.html", "@id": "/quality-metrics-fastqc/353e9b24-51a0-4858-b1aa-4455584bfa97/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIU2BR8HM", "file_size": 354381626, "upload_key": "a5b3d85f-d2a7-4720-86dd-977f606f6b26/4DNFIU2BR8HM.fastq.gz", "display_title": "4DNFIU2BR8HM.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIU2BR8HM/@@download/4DNFIU2BR8HM.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIU2BR8HM/", "dbxrefs": ["SRA:SRR5938785"], "uuid": "a5b3d85f-d2a7-4720-86dd-977f606f6b26", "paired_end": "2", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "b680e7ad-867d-4def-b7df-0447dbdef7eb", "@id": "/files-fastq/4DNFI7NPI4NV/", "status": "released", "display_title": "4DNFI7NPI4NV.fastq.gz", "accession": "4DNFI7NPI4NV", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938785", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938785"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "5d4bc9e2-cce0-4f6a-971c-9ac80f303dd6", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIU2BR8HM/fastqc_report.html", "@id": "/quality-metrics-fastqc/5d4bc9e2-cce0-4f6a-971c-9ac80f303dd6/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIKJI4LW9", "file_size": 397223964, "upload_key": "e59b55f9-a6e0-4f2f-b4d5-aa736eb6e7fd/4DNFIKJI4LW9.fastq.gz", "display_title": "4DNFIKJI4LW9.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIKJI4LW9/@@download/4DNFIKJI4LW9.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIKJI4LW9/", "dbxrefs": ["SRA:SRR5938784"], "uuid": "e59b55f9-a6e0-4f2f-b4d5-aa736eb6e7fd", "paired_end": "1", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "af760ad4-4122-492b-9ba7-bb147fd74395", "@id": "/files-fastq/4DNFICZRE4OC/", "status": "released", "display_title": "4DNFICZRE4OC.fastq.gz", "accession": "4DNFICZRE4OC", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938784", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938784"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "1dbd098d-6124-44a2-8255-af0003597f01", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIKJI4LW9/fastqc_report.html", "@id": "/quality-metrics-fastqc/1dbd098d-6124-44a2-8255-af0003597f01/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFICZRE4OC", "file_size": 351746497, "upload_key": "af760ad4-4122-492b-9ba7-bb147fd74395/4DNFICZRE4OC.fastq.gz", "display_title": "4DNFICZRE4OC.fastq.gz", "status": "released", "href": "/files-fastq/4DNFICZRE4OC/@@download/4DNFICZRE4OC.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFICZRE4OC/", "dbxrefs": ["SRA:SRR5938784"], "uuid": "af760ad4-4122-492b-9ba7-bb147fd74395", "paired_end": "2", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "e59b55f9-a6e0-4f2f-b4d5-aa736eb6e7fd", "@id": "/files-fastq/4DNFIKJI4LW9/", "status": "released", "display_title": "4DNFIKJI4LW9.fastq.gz", "accession": "4DNFIKJI4LW9", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938784", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938784"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "7230ac4f-482b-48a5-8ae9-f549fa00d1bb", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFICZRE4OC/fastqc_report.html", "@id": "/quality-metrics-fastqc/7230ac4f-482b-48a5-8ae9-f549fa00d1bb/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIA5C794W", "file_size": 396863305, "upload_key": "6650408e-29cc-43b6-acaa-79b6b3d80119/4DNFIA5C794W.fastq.gz", "display_title": "4DNFIA5C794W.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIA5C794W/@@download/4DNFIA5C794W.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIA5C794W/", "dbxrefs": ["SRA:SRR5938783"], "uuid": "6650408e-29cc-43b6-acaa-79b6b3d80119", "paired_end": "1", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "1fdacbce-0982-45f1-a502-742a4642971f", "@id": "/files-fastq/4DNFII42BABN/", "status": "released", "display_title": "4DNFII42BABN.fastq.gz", "accession": "4DNFII42BABN", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938783", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938783"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "9520e397-7106-49b1-bf1d-9c00011850e3", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIA5C794W/fastqc_report.html", "@id": "/quality-metrics-fastqc/9520e397-7106-49b1-bf1d-9c00011850e3/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFII42BABN", "file_size": 350762238, "upload_key": "1fdacbce-0982-45f1-a502-742a4642971f/4DNFII42BABN.fastq.gz", "display_title": "4DNFII42BABN.fastq.gz", "status": "released", "href": "/files-fastq/4DNFII42BABN/@@download/4DNFII42BABN.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFII42BABN/", "dbxrefs": ["SRA:SRR5938783"], "uuid": "1fdacbce-0982-45f1-a502-742a4642971f", "paired_end": "2", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "6650408e-29cc-43b6-acaa-79b6b3d80119", "@id": "/files-fastq/4DNFIA5C794W/", "status": "released", "display_title": "4DNFIA5C794W.fastq.gz", "accession": "4DNFIA5C794W", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938783", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938783"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "a1111419-ce69-4e36-a4ee-8d1eea1319f7", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFII42BABN/fastqc_report.html", "@id": "/quality-metrics-fastqc/a1111419-ce69-4e36-a4ee-8d1eea1319f7/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIB4QLP4O", "file_size": 404098385, "upload_key": "d5d55272-a9ee-4e23-87f9-ea2eaa1cd0c0/4DNFIB4QLP4O.fastq.gz", "display_title": "4DNFIB4QLP4O.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIB4QLP4O/@@download/4DNFIB4QLP4O.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIB4QLP4O/", "dbxrefs": ["SRA:SRR5938782"], "uuid": "d5d55272-a9ee-4e23-87f9-ea2eaa1cd0c0", "paired_end": "1", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "eae64ff8-a1f1-41e3-8e08-ac4a1836ad1d", "@id": "/files-fastq/4DNFIEHCHD4H/", "status": "released", "display_title": "4DNFIEHCHD4H.fastq.gz", "accession": "4DNFIEHCHD4H", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938782", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938782"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "ebd9dc45-8a3c-43cd-b593-a44c03b65e4f", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIB4QLP4O/fastqc_report.html", "@id": "/quality-metrics-fastqc/ebd9dc45-8a3c-43cd-b593-a44c03b65e4f/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIEHCHD4H", "file_size": 354587111, "upload_key": "eae64ff8-a1f1-41e3-8e08-ac4a1836ad1d/4DNFIEHCHD4H.fastq.gz", "display_title": "4DNFIEHCHD4H.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIEHCHD4H/@@download/4DNFIEHCHD4H.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIEHCHD4H/", "dbxrefs": ["SRA:SRR5938782"], "uuid": "eae64ff8-a1f1-41e3-8e08-ac4a1836ad1d", "paired_end": "2", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "d5d55272-a9ee-4e23-87f9-ea2eaa1cd0c0", "@id": "/files-fastq/4DNFIB4QLP4O/", "status": "released", "display_title": "4DNFIB4QLP4O.fastq.gz", "accession": "4DNFIB4QLP4O", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938782", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938782"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "9210cfeb-4ab7-4071-b4d2-db028c608741", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIEHCHD4H/fastqc_report.html", "@id": "/quality-metrics-fastqc/9210cfeb-4ab7-4071-b4d2-db028c608741/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIQB1N3IQ", "file_size": 374696036, "upload_key": "672604ec-cec6-41cf-8f78-e76a902b2e59/4DNFIQB1N3IQ.fastq.gz", "display_title": "4DNFIQB1N3IQ.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIQB1N3IQ/@@download/4DNFIQB1N3IQ.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIQB1N3IQ/", "dbxrefs": ["SRA:SRR5938781"], "uuid": "672604ec-cec6-41cf-8f78-e76a902b2e59", "paired_end": "1", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "ca7819a4-5660-4c9c-9415-5a4630c84fd6", "@id": "/files-fastq/4DNFICNIBB35/", "status": "released", "display_title": "4DNFICNIBB35.fastq.gz", "accession": "4DNFICNIBB35", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938781", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938781"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "c10828bd-37c5-41cb-9b9b-fe48842a8052", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIQB1N3IQ/fastqc_report.html", "@id": "/quality-metrics-fastqc/c10828bd-37c5-41cb-9b9b-fe48842a8052/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFICNIBB35", "file_size": 348978984, "upload_key": "ca7819a4-5660-4c9c-9415-5a4630c84fd6/4DNFICNIBB35.fastq.gz", "display_title": "4DNFICNIBB35.fastq.gz", "status": "released", "href": "/files-fastq/4DNFICNIBB35/@@download/4DNFICNIBB35.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFICNIBB35/", "dbxrefs": ["SRA:SRR5938781"], "uuid": "ca7819a4-5660-4c9c-9415-5a4630c84fd6", "paired_end": "2", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "672604ec-cec6-41cf-8f78-e76a902b2e59", "@id": "/files-fastq/4DNFIQB1N3IQ/", "status": "released", "display_title": "4DNFIQB1N3IQ.fastq.gz", "accession": "4DNFIQB1N3IQ", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938781", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938781"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "d082b761-8a0e-40e7-85fe-36e00622562b", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFICNIBB35/fastqc_report.html", "@id": "/quality-metrics-fastqc/d082b761-8a0e-40e7-85fe-36e00622562b/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIOLQMIFL", "file_size": 382518775, "upload_key": "db18d083-3ef1-46aa-94db-16cecb70226f/4DNFIOLQMIFL.fastq.gz", "display_title": "4DNFIOLQMIFL.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIOLQMIFL/@@download/4DNFIOLQMIFL.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIOLQMIFL/", "dbxrefs": ["SRA:SRR5938780"], "uuid": "db18d083-3ef1-46aa-94db-16cecb70226f", "paired_end": "1", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "dcc3f898-1cd5-4ba2-a409-251f1c1ad071", "@id": "/files-fastq/4DNFIV1W1NCI/", "status": "released", "display_title": "4DNFIV1W1NCI.fastq.gz", "accession": "4DNFIV1W1NCI", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938780", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938780"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "6faaa48b-1307-40bd-b1c9-7c700f931285", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIOLQMIFL/fastqc_report.html", "@id": "/quality-metrics-fastqc/6faaa48b-1307-40bd-b1c9-7c700f931285/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIV1W1NCI", "file_size": 339627669, "upload_key": "dcc3f898-1cd5-4ba2-a409-251f1c1ad071/4DNFIV1W1NCI.fastq.gz", "display_title": "4DNFIV1W1NCI.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIV1W1NCI/@@download/4DNFIV1W1NCI.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIV1W1NCI/", "dbxrefs": ["SRA:SRR5938780"], "uuid": "dcc3f898-1cd5-4ba2-a409-251f1c1ad071", "paired_end": "2", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "db18d083-3ef1-46aa-94db-16cecb70226f", "@id": "/files-fastq/4DNFIOLQMIFL/", "status": "released", "display_title": "4DNFIOLQMIFL.fastq.gz", "accession": "4DNFIOLQMIFL", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938780", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938780"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "32e8a7d6-87ba-4843-9630-e77668a81bb5", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIV1W1NCI/fastqc_report.html", "@id": "/quality-metrics-fastqc/32e8a7d6-87ba-4843-9630-e77668a81bb5/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFI2E1UYEW", "file_size": 380919171, "upload_key": "81cc6e70-9843-4755-be53-1ddafddc44ef/4DNFI2E1UYEW.fastq.gz", "display_title": "4DNFI2E1UYEW.fastq.gz", "status": "released", "href": "/files-fastq/4DNFI2E1UYEW/@@download/4DNFI2E1UYEW.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFI2E1UYEW/", "dbxrefs": ["SRA:SRR5938779"], "uuid": "81cc6e70-9843-4755-be53-1ddafddc44ef", "paired_end": "1", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "5fc16ce3-5033-4a7b-81b7-43302a6f76ca", "@id": "/files-fastq/4DNFIK1IMA1O/", "status": "released", "display_title": "4DNFIK1IMA1O.fastq.gz", "accession": "4DNFIK1IMA1O", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938779", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938779"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "overall_quality_status": "PASS", "uuid": "98f2ed0c-2b5a-436b-8db8-8ab481c22fd8", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI2E1UYEW/fastqc_report.html", "@id": "/quality-metrics-fastqc/98f2ed0c-2b5a-436b-8db8-8ab481c22fd8/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIK1IMA1O", "file_size": 335777324, "upload_key": "5fc16ce3-5033-4a7b-81b7-43302a6f76ca/4DNFIK1IMA1O.fastq.gz", "display_title": "4DNFIK1IMA1O.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIK1IMA1O/@@download/4DNFIK1IMA1O.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIK1IMA1O/", "dbxrefs": ["SRA:SRR5938779"], "uuid": "5fc16ce3-5033-4a7b-81b7-43302a6f76ca", "paired_end": "2", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "81cc6e70-9843-4755-be53-1ddafddc44ef", "@id": "/files-fastq/4DNFI2E1UYEW/", "status": "released", "display_title": "4DNFI2E1UYEW.fastq.gz", "accession": "4DNFI2E1UYEW", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938779", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938779"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "820139c4-b8ae-4229-b338-fa9124560463", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIK1IMA1O/fastqc_report.html", "@id": "/quality-metrics-fastqc/820139c4-b8ae-4229-b338-fa9124560463/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFI1F5ABHD", "file_size": 401908536, "upload_key": "a206bcfb-3dea-41ce-8e29-e4eef0737fd4/4DNFI1F5ABHD.fastq.gz", "display_title": "4DNFI1F5ABHD.fastq.gz", "status": "released", "href": "/files-fastq/4DNFI1F5ABHD/@@download/4DNFI1F5ABHD.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFI1F5ABHD/", "dbxrefs": ["SRA:SRR5938778"], "uuid": "a206bcfb-3dea-41ce-8e29-e4eef0737fd4", "paired_end": "1", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "8bf3a1b5-cc56-490b-ac58-d10962ad333f", "@id": "/files-fastq/4DNFIW2WIG6T/", "status": "released", "display_title": "4DNFIW2WIG6T.fastq.gz", "accession": "4DNFIW2WIG6T", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938778", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938778"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "8d1e3842-9d12-4245-926e-f9ecd83ac609", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI1F5ABHD/fastqc_report.html", "@id": "/quality-metrics-fastqc/8d1e3842-9d12-4245-926e-f9ecd83ac609/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIW2WIG6T", "file_size": 354416248, "upload_key": "8bf3a1b5-cc56-490b-ac58-d10962ad333f/4DNFIW2WIG6T.fastq.gz", "display_title": "4DNFIW2WIG6T.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIW2WIG6T/@@download/4DNFIW2WIG6T.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIW2WIG6T/", "dbxrefs": ["SRA:SRR5938778"], "uuid": "8bf3a1b5-cc56-490b-ac58-d10962ad333f", "paired_end": "2", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "a206bcfb-3dea-41ce-8e29-e4eef0737fd4", "@id": "/files-fastq/4DNFI1F5ABHD/", "status": "released", "display_title": "4DNFI1F5ABHD.fastq.gz", "accession": "4DNFI1F5ABHD", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938778", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938778"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "ce9887b4-b732-4778-9749-ca32068bc21d", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIW2WIG6T/fastqc_report.html", "@id": "/quality-metrics-fastqc/ce9887b4-b732-4778-9749-ca32068bc21d/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIBTW6LKL", "file_size": 377697948, "upload_key": "d9dff812-789e-450c-80fc-473db9b2298b/4DNFIBTW6LKL.fastq.gz", "display_title": "4DNFIBTW6LKL.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIBTW6LKL/@@download/4DNFIBTW6LKL.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIBTW6LKL/", "dbxrefs": ["SRA:SRR5938777"], "uuid": "d9dff812-789e-450c-80fc-473db9b2298b", "paired_end": "1", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "b491ee59-baea-48fe-a0fa-267f13ae9ec7", "@id": "/files-fastq/4DNFIVHAQ1GX/", "status": "released", "display_title": "4DNFIVHAQ1GX.fastq.gz", "accession": "4DNFIVHAQ1GX", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938777", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938777"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "f18307c4-7260-48c4-b0a0-c2c306cdcf53", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIBTW6LKL/fastqc_report.html", "@id": "/quality-metrics-fastqc/f18307c4-7260-48c4-b0a0-c2c306cdcf53/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIVHAQ1GX", "file_size": 352149052, "upload_key": "b491ee59-baea-48fe-a0fa-267f13ae9ec7/4DNFIVHAQ1GX.fastq.gz", "display_title": "4DNFIVHAQ1GX.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIVHAQ1GX/@@download/4DNFIVHAQ1GX.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIVHAQ1GX/", "dbxrefs": ["SRA:SRR5938777"], "uuid": "b491ee59-baea-48fe-a0fa-267f13ae9ec7", "paired_end": "2", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "d9dff812-789e-450c-80fc-473db9b2298b", "@id": "/files-fastq/4DNFIBTW6LKL/", "status": "released", "display_title": "4DNFIBTW6LKL.fastq.gz", "accession": "4DNFIBTW6LKL", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938777", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938777"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "1792b65f-26ab-4c7d-9fe5-781bbb1e83e7", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIVHAQ1GX/fastqc_report.html", "@id": "/quality-metrics-fastqc/1792b65f-26ab-4c7d-9fe5-781bbb1e83e7/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFINKILDRP", "file_size": 377524394, "upload_key": "eeb03489-9dce-4a32-a031-2c989c3b546d/4DNFINKILDRP.fastq.gz", "display_title": "4DNFINKILDRP.fastq.gz", "status": "released", "href": "/files-fastq/4DNFINKILDRP/@@download/4DNFINKILDRP.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFINKILDRP/", "dbxrefs": ["SRA:SRR5938776"], "uuid": "eeb03489-9dce-4a32-a031-2c989c3b546d", "paired_end": "1", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "609e9fdd-e247-49bf-8d8f-87af01fa940a", "@id": "/files-fastq/4DNFISWSJ71E/", "status": "released", "display_title": "4DNFISWSJ71E.fastq.gz", "accession": "4DNFISWSJ71E", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938776", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938776"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "284c920c-a89c-47bb-b80b-ca9b41949f89", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFINKILDRP/fastqc_report.html", "@id": "/quality-metrics-fastqc/284c920c-a89c-47bb-b80b-ca9b41949f89/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFISWSJ71E", "file_size": 352031402, "upload_key": "609e9fdd-e247-49bf-8d8f-87af01fa940a/4DNFISWSJ71E.fastq.gz", "display_title": "4DNFISWSJ71E.fastq.gz", "status": "released", "href": "/files-fastq/4DNFISWSJ71E/@@download/4DNFISWSJ71E.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFISWSJ71E/", "dbxrefs": ["SRA:SRR5938776"], "uuid": "609e9fdd-e247-49bf-8d8f-87af01fa940a", "paired_end": "2", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "eeb03489-9dce-4a32-a031-2c989c3b546d", "@id": "/files-fastq/4DNFINKILDRP/", "status": "released", "display_title": "4DNFINKILDRP.fastq.gz", "accession": "4DNFINKILDRP", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938776", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938776"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "f391b0eb-c437-489d-965f-d53716a9fd64", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFISWSJ71E/fastqc_report.html", "@id": "/quality-metrics-fastqc/f391b0eb-c437-489d-965f-d53716a9fd64/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIJR2MU5G", "file_size": 378366089, "upload_key": "0a8ce853-12da-4d9c-a5a9-9b7bd25dd8f3/4DNFIJR2MU5G.fastq.gz", "display_title": "4DNFIJR2MU5G.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIJR2MU5G/@@download/4DNFIJR2MU5G.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIJR2MU5G/", "dbxrefs": ["SRA:SRR5938775"], "uuid": "0a8ce853-12da-4d9c-a5a9-9b7bd25dd8f3", "paired_end": "1", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "a3e999cd-32fa-43af-a360-447326a18e70", "@id": "/files-fastq/4DNFIDDWXTI6/", "status": "released", "display_title": "4DNFIDDWXTI6.fastq.gz", "accession": "4DNFIDDWXTI6", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938775", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938775"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "overall_quality_status": "PASS", "uuid": "7cc08955-b70b-48df-b610-dcece84141fb", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIJR2MU5G/fastqc_report.html", "@id": "/quality-metrics-fastqc/7cc08955-b70b-48df-b610-dcece84141fb/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIDDWXTI6", "file_size": 330280856, "upload_key": "a3e999cd-32fa-43af-a360-447326a18e70/4DNFIDDWXTI6.fastq.gz", "display_title": "4DNFIDDWXTI6.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIDDWXTI6/@@download/4DNFIDDWXTI6.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIDDWXTI6/", "dbxrefs": ["SRA:SRR5938775"], "uuid": "a3e999cd-32fa-43af-a360-447326a18e70", "paired_end": "2", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "0a8ce853-12da-4d9c-a5a9-9b7bd25dd8f3", "@id": "/files-fastq/4DNFIJR2MU5G/", "status": "released", "display_title": "4DNFIJR2MU5G.fastq.gz", "accession": "4DNFIJR2MU5G", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938775", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938775"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "overall_quality_status": "PASS", "uuid": "2ab18683-9c66-498d-a2cf-da2027943c75", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIDDWXTI6/fastqc_report.html", "@id": "/quality-metrics-fastqc/2ab18683-9c66-498d-a2cf-da2027943c75/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIYJBQZYE", "file_size": 407806188, "upload_key": "25ba3815-66e8-420f-9bce-a16271348cb7/4DNFIYJBQZYE.fastq.gz", "display_title": "4DNFIYJBQZYE.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIYJBQZYE/@@download/4DNFIYJBQZYE.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIYJBQZYE/", "dbxrefs": ["SRA:SRR5938774"], "uuid": "25ba3815-66e8-420f-9bce-a16271348cb7", "paired_end": "1", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "ea4971ab-f729-42f0-aaa2-718c93146f9b", "@id": "/files-fastq/4DNFI87GK1VP/", "status": "released", "display_title": "4DNFI87GK1VP.fastq.gz", "accession": "4DNFI87GK1VP", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938774", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938774"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "d7c53229-a7dd-4f64-ba8d-cbc7a331bf8d", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIYJBQZYE/fastqc_report.html", "@id": "/quality-metrics-fastqc/d7c53229-a7dd-4f64-ba8d-cbc7a331bf8d/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFI87GK1VP", "file_size": 364397290, "upload_key": "ea4971ab-f729-42f0-aaa2-718c93146f9b/4DNFI87GK1VP.fastq.gz", "display_title": "4DNFI87GK1VP.fastq.gz", "status": "released", "href": "/files-fastq/4DNFI87GK1VP/@@download/4DNFI87GK1VP.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFI87GK1VP/", "dbxrefs": ["SRA:SRR5938774"], "uuid": "ea4971ab-f729-42f0-aaa2-718c93146f9b", "paired_end": "2", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "25ba3815-66e8-420f-9bce-a16271348cb7", "@id": "/files-fastq/4DNFIYJBQZYE/", "status": "released", "display_title": "4DNFIYJBQZYE.fastq.gz", "accession": "4DNFIYJBQZYE", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938774", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938774"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "7dd4e51e-e52c-4a99-963e-527ebb601c6e", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI87GK1VP/fastqc_report.html", "@id": "/quality-metrics-fastqc/7dd4e51e-e52c-4a99-963e-527ebb601c6e/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFI25ESWIJ", "file_size": 383744114, "upload_key": "3083c8d9-5a49-4bb6-82ea-2b6b1f7daf87/4DNFI25ESWIJ.fastq.gz", "display_title": "4DNFI25ESWIJ.fastq.gz", "status": "released", "href": "/files-fastq/4DNFI25ESWIJ/@@download/4DNFI25ESWIJ.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFI25ESWIJ/", "dbxrefs": ["SRA:SRR5938773"], "uuid": "3083c8d9-5a49-4bb6-82ea-2b6b1f7daf87", "paired_end": "1", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "a81adb7b-cffd-4e72-b647-c02c5322b02e", "@id": "/files-fastq/4DNFI92ADN52/", "status": "released", "display_title": "4DNFI92ADN52.fastq.gz", "accession": "4DNFI92ADN52", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938773", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938773"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "91ee193f-5be2-4696-84a1-49ad912a08cd", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI25ESWIJ/fastqc_report.html", "@id": "/quality-metrics-fastqc/91ee193f-5be2-4696-84a1-49ad912a08cd/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFI92ADN52", "file_size": 359768480, "upload_key": "a81adb7b-cffd-4e72-b647-c02c5322b02e/4DNFI92ADN52.fastq.gz", "display_title": "4DNFI92ADN52.fastq.gz", "status": "released", "href": "/files-fastq/4DNFI92ADN52/@@download/4DNFI92ADN52.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFI92ADN52/", "dbxrefs": ["SRA:SRR5938773"], "uuid": "a81adb7b-cffd-4e72-b647-c02c5322b02e", "paired_end": "2", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "3083c8d9-5a49-4bb6-82ea-2b6b1f7daf87", "@id": "/files-fastq/4DNFI25ESWIJ/", "status": "released", "display_title": "4DNFI25ESWIJ.fastq.gz", "accession": "4DNFI25ESWIJ", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938773", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938773"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "46c7604a-de30-4bea-b95d-bc96b122cef8", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI92ADN52/fastqc_report.html", "@id": "/quality-metrics-fastqc/46c7604a-de30-4bea-b95d-bc96b122cef8/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFILALZEJ8", "file_size": 404288351, "upload_key": "7da9b5df-bde7-4300-8417-182d99d17c9a/4DNFILALZEJ8.fastq.gz", "display_title": "4DNFILALZEJ8.fastq.gz", "status": "released", "href": "/files-fastq/4DNFILALZEJ8/@@download/4DNFILALZEJ8.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFILALZEJ8/", "dbxrefs": ["SRA:SRR5938772"], "uuid": "7da9b5df-bde7-4300-8417-182d99d17c9a", "paired_end": "1", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "19e41530-e213-4e98-afa8-5ddf7f9f746c", "@id": "/files-fastq/4DNFILVEFA1N/", "status": "released", "display_title": "4DNFILVEFA1N.fastq.gz", "accession": "4DNFILVEFA1N", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938772", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938772"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "0b6b5b55-617c-4b55-8d53-9121b02e6b63", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFILALZEJ8/fastqc_report.html", "@id": "/quality-metrics-fastqc/0b6b5b55-617c-4b55-8d53-9121b02e6b63/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFILVEFA1N", "file_size": 355902123, "upload_key": "19e41530-e213-4e98-afa8-5ddf7f9f746c/4DNFILVEFA1N.fastq.gz", "display_title": "4DNFILVEFA1N.fastq.gz", "status": "released", "href": "/files-fastq/4DNFILVEFA1N/@@download/4DNFILVEFA1N.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFILVEFA1N/", "dbxrefs": ["SRA:SRR5938772"], "uuid": "19e41530-e213-4e98-afa8-5ddf7f9f746c", "paired_end": "2", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "7da9b5df-bde7-4300-8417-182d99d17c9a", "@id": "/files-fastq/4DNFILALZEJ8/", "status": "released", "display_title": "4DNFILALZEJ8.fastq.gz", "accession": "4DNFILALZEJ8", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938772", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938772"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "ec6f5387-8822-4993-adf7-258312d2d11e", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFILVEFA1N/fastqc_report.html", "@id": "/quality-metrics-fastqc/ec6f5387-8822-4993-adf7-258312d2d11e/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIVT922B2", "file_size": 380092561, "upload_key": "8970139d-51d5-4813-8036-0c9487775838/4DNFIVT922B2.fastq.gz", "display_title": "4DNFIVT922B2.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIVT922B2/@@download/4DNFIVT922B2.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIVT922B2/", "dbxrefs": ["SRA:SRR5938771"], "uuid": "8970139d-51d5-4813-8036-0c9487775838", "paired_end": "1", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "edd06ebb-fdc5-4345-8655-7168757e5f3e", "@id": "/files-fastq/4DNFI7BFKWLF/", "status": "released", "display_title": "4DNFI7BFKWLF.fastq.gz", "accession": "4DNFI7BFKWLF", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938771", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938771"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "4b7d2da6-0225-40f2-bbb6-9343cf7c0adb", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIVT922B2/fastqc_report.html", "@id": "/quality-metrics-fastqc/4b7d2da6-0225-40f2-bbb6-9343cf7c0adb/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFI7BFKWLF", "file_size": 348360268, "upload_key": "edd06ebb-fdc5-4345-8655-7168757e5f3e/4DNFI7BFKWLF.fastq.gz", "display_title": "4DNFI7BFKWLF.fastq.gz", "status": "released", "href": "/files-fastq/4DNFI7BFKWLF/@@download/4DNFI7BFKWLF.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFI7BFKWLF/", "dbxrefs": ["SRA:SRR5938771"], "uuid": "edd06ebb-fdc5-4345-8655-7168757e5f3e", "paired_end": "2", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "8970139d-51d5-4813-8036-0c9487775838", "@id": "/files-fastq/4DNFIVT922B2/", "status": "released", "display_title": "4DNFIVT922B2.fastq.gz", "accession": "4DNFIVT922B2", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938771", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938771"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "9ed86f2f-548e-4e72-a3ef-f63a950c0da9", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI7BFKWLF/fastqc_report.html", "@id": "/quality-metrics-fastqc/9ed86f2f-548e-4e72-a3ef-f63a950c0da9/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFI8VF8P6A", "file_size": 400989480, "upload_key": "ab5b3cec-7910-4cd5-93d4-b692d84a34b3/4DNFI8VF8P6A.fastq.gz", "display_title": "4DNFI8VF8P6A.fastq.gz", "status": "released", "href": "/files-fastq/4DNFI8VF8P6A/@@download/4DNFI8VF8P6A.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFI8VF8P6A/", "dbxrefs": ["SRA:SRR5938795"], "uuid": "ab5b3cec-7910-4cd5-93d4-b692d84a34b3", "paired_end": "1", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "54740a0c-e2c6-4f43-a0b0-80f7b13cb868", "@id": "/files-fastq/4DNFIRCUWLVR/", "status": "released", "display_title": "4DNFIRCUWLVR.fastq.gz", "accession": "4DNFIRCUWLVR", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938795", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938795"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "overall_quality_status": "PASS", "uuid": "ba213ec1-8b6a-4d91-afcd-4a77d6881938", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI8VF8P6A/fastqc_report.html", "@id": "/quality-metrics-fastqc/ba213ec1-8b6a-4d91-afcd-4a77d6881938/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIRCUWLVR", "file_size": 339208153, "upload_key": "54740a0c-e2c6-4f43-a0b0-80f7b13cb868/4DNFIRCUWLVR.fastq.gz", "display_title": "4DNFIRCUWLVR.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIRCUWLVR/@@download/4DNFIRCUWLVR.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIRCUWLVR/", "dbxrefs": ["SRA:SRR5938795"], "uuid": "54740a0c-e2c6-4f43-a0b0-80f7b13cb868", "paired_end": "2", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "ab5b3cec-7910-4cd5-93d4-b692d84a34b3", "@id": "/files-fastq/4DNFI8VF8P6A/", "status": "released", "display_title": "4DNFI8VF8P6A.fastq.gz", "accession": "4DNFI8VF8P6A", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938795", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938795"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "28878efc-2f9e-4a58-9ae1-7c81e20a050a", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIRCUWLVR/fastqc_report.html", "@id": "/quality-metrics-fastqc/28878efc-2f9e-4a58-9ae1-7c81e20a050a/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFI7KALG32", "file_size": 401912813, "upload_key": "a3a6fc6b-c96d-4649-82e3-39ae6beb8e0e/4DNFI7KALG32.fastq.gz", "display_title": "4DNFI7KALG32.fastq.gz", "status": "released", "href": "/files-fastq/4DNFI7KALG32/@@download/4DNFI7KALG32.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFI7KALG32/", "dbxrefs": ["SRA:SRR5938794"], "uuid": "a3a6fc6b-c96d-4649-82e3-39ae6beb8e0e", "paired_end": "1", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "0c268e8d-1204-4756-9104-1eab5603100f", "@id": "/files-fastq/4DNFIO38TXLK/", "status": "released", "display_title": "4DNFIO38TXLK.fastq.gz", "accession": "4DNFIO38TXLK", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938794", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938794"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "overall_quality_status": "PASS", "uuid": "734735f2-5eb0-4c71-a7c9-ab234fc3b01e", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI7KALG32/fastqc_report.html", "@id": "/quality-metrics-fastqc/734735f2-5eb0-4c71-a7c9-ab234fc3b01e/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIO38TXLK", "file_size": 361288529, "upload_key": "0c268e8d-1204-4756-9104-1eab5603100f/4DNFIO38TXLK.fastq.gz", "display_title": "4DNFIO38TXLK.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIO38TXLK/@@download/4DNFIO38TXLK.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIO38TXLK/", "dbxrefs": ["SRA:SRR5938794"], "uuid": "0c268e8d-1204-4756-9104-1eab5603100f", "paired_end": "2", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "a3a6fc6b-c96d-4649-82e3-39ae6beb8e0e", "@id": "/files-fastq/4DNFI7KALG32/", "status": "released", "display_title": "4DNFI7KALG32.fastq.gz", "accession": "4DNFI7KALG32", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938794", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938794"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "6ea441b1-d845-4906-897e-302dcbb2623e", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIO38TXLK/fastqc_report.html", "@id": "/quality-metrics-fastqc/6ea441b1-d845-4906-897e-302dcbb2623e/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFI412H4GM", "file_size": 371987629, "upload_key": "ca42c787-e10d-4121-96e8-9d6bdc5f0033/4DNFI412H4GM.fastq.gz", "display_title": "4DNFI412H4GM.fastq.gz", "status": "released", "href": "/files-fastq/4DNFI412H4GM/@@download/4DNFI412H4GM.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFI412H4GM/", "dbxrefs": ["SRA:SRR5938796"], "uuid": "ca42c787-e10d-4121-96e8-9d6bdc5f0033", "paired_end": "1", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "d8d0f9f4-b540-4b54-8d88-3b7239678a9a", "@id": "/files-fastq/4DNFIYWAG1DY/", "status": "released", "display_title": "4DNFIYWAG1DY.fastq.gz", "accession": "4DNFIYWAG1DY", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938796", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938796"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "f395a162-f841-4829-8868-72b671db19a1", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI412H4GM/fastqc_report.html", "@id": "/quality-metrics-fastqc/f395a162-f841-4829-8868-72b671db19a1/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIYWAG1DY", "file_size": 327479222, "upload_key": "d8d0f9f4-b540-4b54-8d88-3b7239678a9a/4DNFIYWAG1DY.fastq.gz", "display_title": "4DNFIYWAG1DY.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIYWAG1DY/@@download/4DNFIYWAG1DY.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIYWAG1DY/", "dbxrefs": ["SRA:SRR5938796"], "uuid": "d8d0f9f4-b540-4b54-8d88-3b7239678a9a", "paired_end": "2", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "ca42c787-e10d-4121-96e8-9d6bdc5f0033", "@id": "/files-fastq/4DNFI412H4GM/", "status": "released", "display_title": "4DNFI412H4GM.fastq.gz", "accession": "4DNFI412H4GM", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938796", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938796"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "overall_quality_status": "PASS", "uuid": "823afb63-5d11-4d50-ab72-1198fbca655c", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIYWAG1DY/fastqc_report.html", "@id": "/quality-metrics-fastqc/823afb63-5d11-4d50-ab72-1198fbca655c/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIHJ62BCM", "file_size": 400065991, "upload_key": "725b35e6-3fc7-402d-91fa-36a9ec2e3441/4DNFIHJ62BCM.fastq.gz", "display_title": "4DNFIHJ62BCM.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIHJ62BCM/@@download/4DNFIHJ62BCM.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIHJ62BCM/", "dbxrefs": ["SRA:SRR5938792"], "uuid": "725b35e6-3fc7-402d-91fa-36a9ec2e3441", "paired_end": "1", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "c3f52f52-8702-4a74-b481-3df17e93d0e8", "@id": "/files-fastq/4DNFI28LQ6RE/", "status": "released", "display_title": "4DNFI28LQ6RE.fastq.gz", "accession": "4DNFI28LQ6RE", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938792", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938792"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "overall_quality_status": "PASS", "uuid": "6f306b74-18fe-432b-ada2-2a6156ca5b13", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIHJ62BCM/fastqc_report.html", "@id": "/quality-metrics-fastqc/6f306b74-18fe-432b-ada2-2a6156ca5b13/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFI28LQ6RE", "file_size": 334737473, "upload_key": "c3f52f52-8702-4a74-b481-3df17e93d0e8/4DNFI28LQ6RE.fastq.gz", "display_title": "4DNFI28LQ6RE.fastq.gz", "status": "released", "href": "/files-fastq/4DNFI28LQ6RE/@@download/4DNFI28LQ6RE.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFI28LQ6RE/", "dbxrefs": ["SRA:SRR5938792"], "uuid": "c3f52f52-8702-4a74-b481-3df17e93d0e8", "paired_end": "2", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "725b35e6-3fc7-402d-91fa-36a9ec2e3441", "@id": "/files-fastq/4DNFIHJ62BCM/", "status": "released", "display_title": "4DNFIHJ62BCM.fastq.gz", "accession": "4DNFIHJ62BCM", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938792", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938792"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "overall_quality_status": "PASS", "uuid": "cb09263b-e7f1-4a3e-8f12-2ba948b68d93", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI28LQ6RE/fastqc_report.html", "@id": "/quality-metrics-fastqc/cb09263b-e7f1-4a3e-8f12-2ba948b68d93/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFI9X7DKDD", "file_size": 374486435, "upload_key": "267a8ffd-4110-426b-abc8-639d2b3c1ff9/4DNFI9X7DKDD.fastq.gz", "display_title": "4DNFI9X7DKDD.fastq.gz", "status": "released", "href": "/files-fastq/4DNFI9X7DKDD/@@download/4DNFI9X7DKDD.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFI9X7DKDD/", "dbxrefs": ["SRA:SRR5938791"], "uuid": "267a8ffd-4110-426b-abc8-639d2b3c1ff9", "paired_end": "1", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "b1a970d9-68dc-4693-a726-9e3eb1838380", "@id": "/files-fastq/4DNFIB9WI3P8/", "status": "released", "display_title": "4DNFIB9WI3P8.fastq.gz", "accession": "4DNFIB9WI3P8", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938791", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938791"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "overall_quality_status": "PASS", "uuid": "0094ec28-c925-4e32-bae1-f3a01a5698e0", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI9X7DKDD/fastqc_report.html", "@id": "/quality-metrics-fastqc/0094ec28-c925-4e32-bae1-f3a01a5698e0/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIB9WI3P8", "file_size": 352556386, "upload_key": "b1a970d9-68dc-4693-a726-9e3eb1838380/4DNFIB9WI3P8.fastq.gz", "display_title": "4DNFIB9WI3P8.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIB9WI3P8/@@download/4DNFIB9WI3P8.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIB9WI3P8/", "dbxrefs": ["SRA:SRR5938791"], "uuid": "b1a970d9-68dc-4693-a726-9e3eb1838380", "paired_end": "2", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "267a8ffd-4110-426b-abc8-639d2b3c1ff9", "@id": "/files-fastq/4DNFI9X7DKDD/", "status": "released", "display_title": "4DNFI9X7DKDD.fastq.gz", "accession": "4DNFI9X7DKDD", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938791", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938791"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "overall_quality_status": "PASS", "uuid": "7102cb66-8899-47c7-9028-2940b2d7ff7c", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIB9WI3P8/fastqc_report.html", "@id": "/quality-metrics-fastqc/7102cb66-8899-47c7-9028-2940b2d7ff7c/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIFFMEPXU", "file_size": 373562488, "upload_key": "996cc8c7-caaf-481d-8113-1e9893fa34b2/4DNFIFFMEPXU.fastq.gz", "display_title": "4DNFIFFMEPXU.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIFFMEPXU/@@download/4DNFIFFMEPXU.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIFFMEPXU/", "dbxrefs": ["SRA:SRR5938797"], "uuid": "996cc8c7-caaf-481d-8113-1e9893fa34b2", "paired_end": "1", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "136298ee-bd6a-45d3-84df-97ea3ec243d6", "@id": "/files-fastq/4DNFI3WZBTYH/", "status": "released", "display_title": "4DNFI3WZBTYH.fastq.gz", "accession": "4DNFI3WZBTYH", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938797", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938797"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "uuid": "b3a2ce3f-7c12-41a1-8ac7-95969f76bbb4", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIFFMEPXU/fastqc_report.html", "@id": "/quality-metrics-fastqc/b3a2ce3f-7c12-41a1-8ac7-95969f76bbb4/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFI3WZBTYH", "file_size": 329357891, "upload_key": "136298ee-bd6a-45d3-84df-97ea3ec243d6/4DNFI3WZBTYH.fastq.gz", "display_title": "4DNFI3WZBTYH.fastq.gz", "status": "released", "href": "/files-fastq/4DNFI3WZBTYH/@@download/4DNFI3WZBTYH.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFI3WZBTYH/", "dbxrefs": ["SRA:SRR5938797"], "uuid": "136298ee-bd6a-45d3-84df-97ea3ec243d6", "paired_end": "2", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "996cc8c7-caaf-481d-8113-1e9893fa34b2", "@id": "/files-fastq/4DNFIFFMEPXU/", "status": "released", "display_title": "4DNFIFFMEPXU.fastq.gz", "accession": "4DNFIFFMEPXU", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938797", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938797"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "overall_quality_status": "PASS", "uuid": "ca877d92-606d-4220-b2f2-8a18ff733147", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI3WZBTYH/fastqc_report.html", "@id": "/quality-metrics-fastqc/ca877d92-606d-4220-b2f2-8a18ff733147/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIRME5TMG", "file_size": 373346500, "upload_key": "580bfd6b-065b-48c8-964e-e04e0ac64d45/4DNFIRME5TMG.fastq.gz", "display_title": "4DNFIRME5TMG.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIRME5TMG/@@download/4DNFIRME5TMG.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIRME5TMG/", "dbxrefs": ["SRA:SRR5938798"], "uuid": "580bfd6b-065b-48c8-964e-e04e0ac64d45", "paired_end": "1", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "a1364204-47ca-4f97-8d27-33363e2fb474", "@id": "/files-fastq/4DNFIBPE4KIY/", "status": "released", "display_title": "4DNFIBPE4KIY.fastq.gz", "accession": "4DNFIBPE4KIY", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938798", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938798"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "overall_quality_status": "PASS", "uuid": "dfeeeb37-6d94-4ee5-ac6b-026f91781427", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIRME5TMG/fastqc_report.html", "@id": "/quality-metrics-fastqc/dfeeeb37-6d94-4ee5-ac6b-026f91781427/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIBPE4KIY", "file_size": 329949228, "upload_key": "a1364204-47ca-4f97-8d27-33363e2fb474/4DNFIBPE4KIY.fastq.gz", "display_title": "4DNFIBPE4KIY.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIBPE4KIY/@@download/4DNFIBPE4KIY.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIBPE4KIY/", "dbxrefs": ["SRA:SRR5938798"], "uuid": "a1364204-47ca-4f97-8d27-33363e2fb474", "paired_end": "2", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "580bfd6b-065b-48c8-964e-e04e0ac64d45", "@id": "/files-fastq/4DNFIRME5TMG/", "status": "released", "display_title": "4DNFIRME5TMG.fastq.gz", "accession": "4DNFIRME5TMG", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938798", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938798"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "overall_quality_status": "PASS", "uuid": "d9be982d-740b-4443-84c8-48e9cbd850f8", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIBPE4KIY/fastqc_report.html", "@id": "/quality-metrics-fastqc/d9be982d-740b-4443-84c8-48e9cbd850f8/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFI6IUIIG5", "file_size": 378071277, "upload_key": "149de807-631c-45c0-8d75-3906d7aac7cc/4DNFI6IUIIG5.fastq.gz", "display_title": "4DNFI6IUIIG5.fastq.gz", "status": "released", "href": "/files-fastq/4DNFI6IUIIG5/@@download/4DNFI6IUIIG5.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFI6IUIIG5/", "dbxrefs": ["SRA:SRR5938788"], "uuid": "149de807-631c-45c0-8d75-3906d7aac7cc", "paired_end": "1", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "e4462875-de2a-458a-b8c3-fbee6addc988", "@id": "/files-fastq/4DNFI4EA71WC/", "status": "released", "display_title": "4DNFI4EA71WC.fastq.gz", "accession": "4DNFI4EA71WC", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938788", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938788"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "overall_quality_status": "PASS", "uuid": "d32f4971-0dfb-43c7-aefd-22e2732e17c9", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI6IUIIG5/fastqc_report.html", "@id": "/quality-metrics-fastqc/d32f4971-0dfb-43c7-aefd-22e2732e17c9/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFI4EA71WC", "file_size": 337312840, "upload_key": "e4462875-de2a-458a-b8c3-fbee6addc988/4DNFI4EA71WC.fastq.gz", "display_title": "4DNFI4EA71WC.fastq.gz", "status": "released", "href": "/files-fastq/4DNFI4EA71WC/@@download/4DNFI4EA71WC.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFI4EA71WC/", "dbxrefs": ["SRA:SRR5938788"], "uuid": "e4462875-de2a-458a-b8c3-fbee6addc988", "paired_end": "2", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "149de807-631c-45c0-8d75-3906d7aac7cc", "@id": "/files-fastq/4DNFI6IUIIG5/", "status": "released", "display_title": "4DNFI6IUIIG5.fastq.gz", "accession": "4DNFI6IUIIG5", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938788", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938788"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "overall_quality_status": "PASS", "uuid": "493ea7e8-7f3e-49d8-8a0d-742e52a12d05", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI4EA71WC/fastqc_report.html", "@id": "/quality-metrics-fastqc/493ea7e8-7f3e-49d8-8a0d-742e52a12d05/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIDVDWKZY", "file_size": 398710921, "upload_key": "48acc8a1-b996-41e2-a6f3-b96f17d4c894/4DNFIDVDWKZY.fastq.gz", "display_title": "4DNFIDVDWKZY.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIDVDWKZY/@@download/4DNFIDVDWKZY.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIDVDWKZY/", "dbxrefs": ["SRA:SRR5938799"], "uuid": "48acc8a1-b996-41e2-a6f3-b96f17d4c894", "paired_end": "1", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "5f8c7bc6-5dcf-4349-afe4-b3a320f263f5", "@id": "/files-fastq/4DNFIAUJNY9D/", "status": "released", "display_title": "4DNFIAUJNY9D.fastq.gz", "accession": "4DNFIAUJNY9D", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938799", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938799"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "overall_quality_status": "PASS", "uuid": "236c39e2-4c4f-4c35-b75d-e4975a6c252e", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIDVDWKZY/fastqc_report.html", "@id": "/quality-metrics-fastqc/236c39e2-4c4f-4c35-b75d-e4975a6c252e/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIAUJNY9D", "file_size": 334416792, "upload_key": "5f8c7bc6-5dcf-4349-afe4-b3a320f263f5/4DNFIAUJNY9D.fastq.gz", "display_title": "4DNFIAUJNY9D.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIAUJNY9D/@@download/4DNFIAUJNY9D.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIAUJNY9D/", "dbxrefs": ["SRA:SRR5938799"], "uuid": "5f8c7bc6-5dcf-4349-afe4-b3a320f263f5", "paired_end": "2", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "48acc8a1-b996-41e2-a6f3-b96f17d4c894", "@id": "/files-fastq/4DNFIDVDWKZY/", "status": "released", "display_title": "4DNFIDVDWKZY.fastq.gz", "accession": "4DNFIDVDWKZY", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938799", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938799"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "overall_quality_status": "PASS", "uuid": "51f81bf1-af96-4ff5-b7c5-598baba68fe5", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIAUJNY9D/fastqc_report.html", "@id": "/quality-metrics-fastqc/51f81bf1-af96-4ff5-b7c5-598baba68fe5/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIHHA325G", "file_size": 400452670, "upload_key": "bbfc17cf-47cd-470a-88f2-a7a3b0b791d0/4DNFIHHA325G.fastq.gz", "display_title": "4DNFIHHA325G.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIHHA325G/@@download/4DNFIHHA325G.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIHHA325G/", "dbxrefs": ["SRA:SRR5938800"], "uuid": "bbfc17cf-47cd-470a-88f2-a7a3b0b791d0", "paired_end": "1", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "1814865c-27f8-4884-9628-dd77f596df63", "@id": "/files-fastq/4DNFIQLV9J43/", "status": "released", "display_title": "4DNFIQLV9J43.fastq.gz", "accession": "4DNFIQLV9J43", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938800", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938800"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "overall_quality_status": "PASS", "uuid": "6310839c-ebb7-4d60-a6e1-6e2fadcfe41c", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIHHA325G/fastqc_report.html", "@id": "/quality-metrics-fastqc/6310839c-ebb7-4d60-a6e1-6e2fadcfe41c/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIQLV9J43", "file_size": 338010307, "upload_key": "1814865c-27f8-4884-9628-dd77f596df63/4DNFIQLV9J43.fastq.gz", "display_title": "4DNFIQLV9J43.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIQLV9J43/@@download/4DNFIQLV9J43.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIQLV9J43/", "dbxrefs": ["SRA:SRR5938800"], "uuid": "1814865c-27f8-4884-9628-dd77f596df63", "paired_end": "2", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "bbfc17cf-47cd-470a-88f2-a7a3b0b791d0", "@id": "/files-fastq/4DNFIHHA325G/", "status": "released", "display_title": "4DNFIHHA325G.fastq.gz", "accession": "4DNFIHHA325G", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938800", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938800"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "overall_quality_status": "PASS", "uuid": "b65e1151-b026-4c40-b430-67ba96d94dff", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIQLV9J43/fastqc_report.html", "@id": "/quality-metrics-fastqc/b65e1151-b026-4c40-b430-67ba96d94dff/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIEZZ7393", "file_size": 339004529, "upload_key": "eefe5dcb-2c24-40d9-a8cf-c2b9467d3839/4DNFIEZZ7393.fastq.gz", "display_title": "4DNFIEZZ7393.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIEZZ7393/@@download/4DNFIEZZ7393.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIEZZ7393/", "dbxrefs": ["SRA:SRR5938801"], "uuid": "eefe5dcb-2c24-40d9-a8cf-c2b9467d3839", "paired_end": "1", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "a4078688-30f0-4384-b666-acb40510f313", "@id": "/files-fastq/4DNFIFJ2E89P/", "status": "released", "display_title": "4DNFIFJ2E89P.fastq.gz", "accession": "4DNFIFJ2E89P", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938801", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938801"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "overall_quality_status": "PASS", "uuid": "c0f3f27f-442d-42c7-abb4-812652e0d5a3", "Total Sequences": 3552791, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIEZZ7393/fastqc_report.html", "@id": "/quality-metrics-fastqc/c0f3f27f-442d-42c7-abb4-812652e0d5a3/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIFJ2E89P", "file_size": 307343996, "upload_key": "a4078688-30f0-4384-b666-acb40510f313/4DNFIFJ2E89P.fastq.gz", "display_title": "4DNFIFJ2E89P.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIFJ2E89P/@@download/4DNFIFJ2E89P.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIFJ2E89P/", "dbxrefs": ["SRA:SRR5938801"], "uuid": "a4078688-30f0-4384-b666-acb40510f313", "paired_end": "2", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "eefe5dcb-2c24-40d9-a8cf-c2b9467d3839", "@id": "/files-fastq/4DNFIEZZ7393/", "status": "released", "display_title": "4DNFIEZZ7393.fastq.gz", "accession": "4DNFIEZZ7393", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938801", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938801"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "overall_quality_status": "PASS", "uuid": "8dbd42c3-9fe9-48dd-b7a8-0834b200825e", "Total Sequences": 3552791, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIFJ2E89P/fastqc_report.html", "@id": "/quality-metrics-fastqc/8dbd42c3-9fe9-48dd-b7a8-0834b200825e/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFINP9FZDZ", "file_size": 382600162, "upload_key": "ce29f1b6-6640-4650-b2e3-91ec25ca1a79/4DNFINP9FZDZ.fastq.gz", "display_title": "4DNFINP9FZDZ.fastq.gz", "status": "released", "href": "/files-fastq/4DNFINP9FZDZ/@@download/4DNFINP9FZDZ.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFINP9FZDZ/", "dbxrefs": ["SRA:SRR5938802"], "uuid": "ce29f1b6-6640-4650-b2e3-91ec25ca1a79", "paired_end": "1", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "e6a78b87-e2a4-4cc3-9177-dfb2deb163ac", "@id": "/files-fastq/4DNFIVLPG6LH/", "status": "released", "display_title": "4DNFIVLPG6LH.fastq.gz", "accession": "4DNFIVLPG6LH", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938802", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938802"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "overall_quality_status": "PASS", "uuid": "77cbdda4-e29c-49a0-8f8f-f6f037f4d254", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFINP9FZDZ/fastqc_report.html", "@id": "/quality-metrics-fastqc/77cbdda4-e29c-49a0-8f8f-f6f037f4d254/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIVLPG6LH", "file_size": 358168738, "upload_key": "e6a78b87-e2a4-4cc3-9177-dfb2deb163ac/4DNFIVLPG6LH.fastq.gz", "display_title": "4DNFIVLPG6LH.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIVLPG6LH/@@download/4DNFIVLPG6LH.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIVLPG6LH/", "dbxrefs": ["SRA:SRR5938802"], "uuid": "e6a78b87-e2a4-4cc3-9177-dfb2deb163ac", "paired_end": "2", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "ce29f1b6-6640-4650-b2e3-91ec25ca1a79", "@id": "/files-fastq/4DNFINP9FZDZ/", "status": "released", "display_title": "4DNFINP9FZDZ.fastq.gz", "accession": "4DNFINP9FZDZ", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938802", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938802"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "overall_quality_status": "PASS", "uuid": "1ecbe1fa-bd1e-411a-af77-99bdd030d548", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIVLPG6LH/fastqc_report.html", "@id": "/quality-metrics-fastqc/1ecbe1fa-bd1e-411a-af77-99bdd030d548/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIP3KGD24", "file_size": 407387266, "upload_key": "70e17825-a8be-45b9-912a-ccbc5e2047ed/4DNFIP3KGD24.fastq.gz", "display_title": "4DNFIP3KGD24.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIP3KGD24/@@download/4DNFIP3KGD24.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIP3KGD24/", "dbxrefs": ["SRA:SRR5938803"], "uuid": "70e17825-a8be-45b9-912a-ccbc5e2047ed", "paired_end": "1", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "a53adc30-d1be-4a2a-b084-f8032f935f45", "@id": "/files-fastq/4DNFI88POAJ1/", "status": "released", "display_title": "4DNFI88POAJ1.fastq.gz", "accession": "4DNFI88POAJ1", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938803", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938803"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "overall_quality_status": "PASS", "uuid": "681e033c-311c-4ac8-a3e7-a009594f7357", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIP3KGD24/fastqc_report.html", "@id": "/quality-metrics-fastqc/681e033c-311c-4ac8-a3e7-a009594f7357/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFI88POAJ1", "file_size": 340713815, "upload_key": "a53adc30-d1be-4a2a-b084-f8032f935f45/4DNFI88POAJ1.fastq.gz", "display_title": "4DNFI88POAJ1.fastq.gz", "status": "released", "href": "/files-fastq/4DNFI88POAJ1/@@download/4DNFI88POAJ1.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFI88POAJ1/", "dbxrefs": ["SRA:SRR5938803"], "uuid": "a53adc30-d1be-4a2a-b084-f8032f935f45", "paired_end": "2", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "70e17825-a8be-45b9-912a-ccbc5e2047ed", "@id": "/files-fastq/4DNFIP3KGD24/", "status": "released", "display_title": "4DNFIP3KGD24.fastq.gz", "accession": "4DNFIP3KGD24", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938803", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938803"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "overall_quality_status": "PASS", "uuid": "ac635e85-94f8-430b-afeb-5891957ee347", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI88POAJ1/fastqc_report.html", "@id": "/quality-metrics-fastqc/ac635e85-94f8-430b-afeb-5891957ee347/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIBMTQ8EI", "file_size": 385158768, "upload_key": "6eeb1e7a-133e-478e-9fcb-77eedcac84b5/4DNFIBMTQ8EI.fastq.gz", "display_title": "4DNFIBMTQ8EI.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIBMTQ8EI/@@download/4DNFIBMTQ8EI.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIBMTQ8EI/", "dbxrefs": ["SRA:SRR5938804"], "uuid": "6eeb1e7a-133e-478e-9fcb-77eedcac84b5", "paired_end": "1", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "2a3635b0-604e-41be-b91b-a6bdd887c6cf", "@id": "/files-fastq/4DNFIF5AW5S9/", "status": "released", "display_title": "4DNFIF5AW5S9.fastq.gz", "accession": "4DNFIF5AW5S9", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938804", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938804"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "overall_quality_status": "PASS", "uuid": "189759f2-3ed4-43b4-9f30-09c948c372c6", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIBMTQ8EI/fastqc_report.html", "@id": "/quality-metrics-fastqc/189759f2-3ed4-43b4-9f30-09c948c372c6/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIF5AW5S9", "file_size": 344260031, "upload_key": "2a3635b0-604e-41be-b91b-a6bdd887c6cf/4DNFIF5AW5S9.fastq.gz", "display_title": "4DNFIF5AW5S9.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIF5AW5S9/@@download/4DNFIF5AW5S9.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIF5AW5S9/", "dbxrefs": ["SRA:SRR5938804"], "uuid": "2a3635b0-604e-41be-b91b-a6bdd887c6cf", "paired_end": "2", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "6eeb1e7a-133e-478e-9fcb-77eedcac84b5", "@id": "/files-fastq/4DNFIBMTQ8EI/", "status": "released", "display_title": "4DNFIBMTQ8EI.fastq.gz", "accession": "4DNFIBMTQ8EI", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938804", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938804"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "overall_quality_status": "PASS", "uuid": "de0cefac-edac-45f3-b76c-e1861cbee371", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIF5AW5S9/fastqc_report.html", "@id": "/quality-metrics-fastqc/de0cefac-edac-45f3-b76c-e1861cbee371/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIT21T45J", "file_size": 380163941, "upload_key": "56ddae27-2169-437f-8782-90490b6bebd8/4DNFIT21T45J.fastq.gz", "display_title": "4DNFIT21T45J.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIT21T45J/@@download/4DNFIT21T45J.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIT21T45J/", "dbxrefs": ["SRA:SRR5938805"], "uuid": "56ddae27-2169-437f-8782-90490b6bebd8", "paired_end": "1", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "a9dec0e4-cf38-4933-a8ce-a0a45fa64454", "@id": "/files-fastq/4DNFIUCF37QQ/", "status": "released", "display_title": "4DNFIUCF37QQ.fastq.gz", "accession": "4DNFIUCF37QQ", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938805", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938805"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "overall_quality_status": "PASS", "uuid": "2eead10a-101c-4589-81e6-c37652b305c2", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIT21T45J/fastqc_report.html", "@id": "/quality-metrics-fastqc/2eead10a-101c-4589-81e6-c37652b305c2/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIUCF37QQ", "file_size": 330450155, "upload_key": "a9dec0e4-cf38-4933-a8ce-a0a45fa64454/4DNFIUCF37QQ.fastq.gz", "display_title": "4DNFIUCF37QQ.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIUCF37QQ/@@download/4DNFIUCF37QQ.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIUCF37QQ/", "dbxrefs": ["SRA:SRR5938805"], "uuid": "a9dec0e4-cf38-4933-a8ce-a0a45fa64454", "paired_end": "2", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "56ddae27-2169-437f-8782-90490b6bebd8", "@id": "/files-fastq/4DNFIT21T45J/", "status": "released", "display_title": "4DNFIT21T45J.fastq.gz", "accession": "4DNFIT21T45J", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938805", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938805"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "overall_quality_status": "PASS", "uuid": "c05b24c7-4618-44c6-84b5-af4d8f192e31", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIUCF37QQ/fastqc_report.html", "@id": "/quality-metrics-fastqc/c05b24c7-4618-44c6-84b5-af4d8f192e31/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFI1GZUD2A", "file_size": 381104711, "upload_key": "3cfe8d99-e400-46d3-b984-9fdf74c86838/4DNFI1GZUD2A.fastq.gz", "display_title": "4DNFI1GZUD2A.fastq.gz", "status": "released", "href": "/files-fastq/4DNFI1GZUD2A/@@download/4DNFI1GZUD2A.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFI1GZUD2A/", "dbxrefs": ["SRA:SRR5938806"], "uuid": "3cfe8d99-e400-46d3-b984-9fdf74c86838", "paired_end": "1", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "ea3e75f1-1efe-4955-9543-7d38bf5e4234", "@id": "/files-fastq/4DNFIAYJNIHH/", "status": "released", "display_title": "4DNFIAYJNIHH.fastq.gz", "accession": "4DNFIAYJNIHH", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938806", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938806"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "overall_quality_status": "PASS", "uuid": "def193a5-792b-4ef6-ba2b-8262e521bb61", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI1GZUD2A/fastqc_report.html", "@id": "/quality-metrics-fastqc/def193a5-792b-4ef6-ba2b-8262e521bb61/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIAYJNIHH", "file_size": 332486191, "upload_key": "ea3e75f1-1efe-4955-9543-7d38bf5e4234/4DNFIAYJNIHH.fastq.gz", "display_title": "4DNFIAYJNIHH.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIAYJNIHH/@@download/4DNFIAYJNIHH.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIAYJNIHH/", "dbxrefs": ["SRA:SRR5938806"], "uuid": "ea3e75f1-1efe-4955-9543-7d38bf5e4234", "paired_end": "2", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "3cfe8d99-e400-46d3-b984-9fdf74c86838", "@id": "/files-fastq/4DNFI1GZUD2A/", "status": "released", "display_title": "4DNFI1GZUD2A.fastq.gz", "accession": "4DNFI1GZUD2A", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938806", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938806"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "overall_quality_status": "PASS", "uuid": "2ed94437-6fb8-4b0d-9954-773540162190", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIAYJNIHH/fastqc_report.html", "@id": "/quality-metrics-fastqc/2ed94437-6fb8-4b0d-9954-773540162190/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFIOQYM7N4", "file_size": 403156186, "upload_key": "da0405b3-7dc5-45cf-99c1-90d4ec6ab792/4DNFIOQYM7N4.fastq.gz", "display_title": "4DNFIOQYM7N4.fastq.gz", "status": "released", "href": "/files-fastq/4DNFIOQYM7N4/@@download/4DNFIOQYM7N4.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFIOQYM7N4/", "dbxrefs": ["SRA:SRR5938807"], "uuid": "da0405b3-7dc5-45cf-99c1-90d4ec6ab792", "paired_end": "1", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "82dacf6c-c82f-4765-b3ab-99b87368d2a9", "@id": "/files-fastq/4DNFI95UBEOX/", "status": "released", "display_title": "4DNFI95UBEOX.fastq.gz", "accession": "4DNFI95UBEOX", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938807", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938807"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "overall_quality_status": "PASS", "uuid": "a3baa9c3-d009-46ec-8bd2-959593c583a3", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIOQYM7N4/fastqc_report.html", "@id": "/quality-metrics-fastqc/a3baa9c3-d009-46ec-8bd2-959593c583a3/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"accession": "4DNFI95UBEOX", "file_size": 332659381, "upload_key": "82dacf6c-c82f-4765-b3ab-99b87368d2a9/4DNFI95UBEOX.fastq.gz", "display_title": "4DNFI95UBEOX.fastq.gz", "status": "released", "href": "/files-fastq/4DNFI95UBEOX/@@download/4DNFI95UBEOX.fastq.gz", "file_classification": "raw file", "file_type": "reads", "file_type_detailed": "reads (fastq)", "@id": "/files-fastq/4DNFI95UBEOX/", "dbxrefs": ["SRA:SRR5938807"], "uuid": "82dacf6c-c82f-4765-b3ab-99b87368d2a9", "paired_end": "2", "@type": ["FileFastq", "File", "Item"], "related_files": [{"relationship_type": "paired with", "file": {"paired_end": "1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "uuid": "da0405b3-7dc5-45cf-99c1-90d4ec6ab792", "@id": "/files-fastq/4DNFIOQYM7N4/", "status": "released", "display_title": "4DNFIOQYM7N4.fastq.gz", "accession": "4DNFIOQYM7N4", "file_type": "reads", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "external_references": [{"ref": "SRA:SRR5938807", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938807"}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "status": "released", "@id": "/file-formats/fastq/", "file_format": "fastq", "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"display_title": "QualityMetricFastqc from 2018-11-15", "overall_quality_status": "PASS", "uuid": "7ad676e1-3a18-467f-864f-816f63bc643a", "Total Sequences": 4000000, "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Sequence length": "100", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI95UBEOX/fastqc_report.html", "@id": "/quality-metrics-fastqc/7ad676e1-3a18-467f-864f-816f63bc643a/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "status": "released", "aliases": ["4dn-dcic-lab:GSM2745848"], "dbxrefs": ["GEO:GSM2745848"], "protocol": {"display_title": "GSE102740_hic_protocol.pdf", "@id": "/protocols/e89ce7e7-92ba-4af4-b910-74b269c0e845/", "status": "released", "uuid": "e89ce7e7-92ba-4af4-b910-74b269c0e845", "@type": ["Protocol", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "accession": "4DNEXMF73UXS", "biosample": {"status": "released", "biosample_type": "immortalized cells", "modifications_summary": "None", "@type": ["Biosample", "Item"], "display_title": "4DNBSUKOFFC2", "accession": "4DNBSUKOFFC2", "biosource_summary": "DT40 with random integration of X. laevis Cdk1, CDK1 disruption", "uuid": "94241f75-d085-494c-88d2-660426352549", "treatments_summary": "1NM-PP1 treatment (2.0 \u03bcM, 10.0h)", "@id": "/biosamples/4DNBSUKOFFC2/", "biosource": [{"lab": {"@id": "/labs/job-dekker-lab/", "@type": ["Lab", "Item"], "display_title": "Job Dekker, UMMS", "status": "current", "uuid": "3c577664-affb-41c4-bf27-9e21c2fc1554", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin", "role.lab_submitter", "submits_for.3c577664-affb-41c4-bf27-9e21c2fc1554"]}}, "award": {"@type": ["Award", "Item"], "display_title": "EXTERNAL AWARD", "uuid": "12a92962-8265-4fc0-b2f8-cf14f05db58b", "@id": "/awards/external-award/", "status": "current", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "status": "released", "tissue": {"@type": ["OntologyTerm", "Item"], "preferred_name": "bursa of Fabricius", "term_name": "bursa of Fabricius", "term_id": "UBERON:0003903", "display_title": "bursa of Fabricius", "uuid": "1bfd1088-3311-4711-8c41-83dbed3db972", "status": "released", "slim_terms": [{"@id": "/ontology-terms/UBERON:0001007/", "@type": ["OntologyTerm", "Item"], "display_title": "digestive system", "status": "released", "uuid": "111129bc-8535-4448-903e-854af460a233", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@id": "/ontology-terms/UBERON:0000926/", "@type": ["OntologyTerm", "Item"], "display_title": "mesoderm", "status": "released", "uuid": "111120bc-8535-4448-903e-854af460a233", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "@id": "/ontology-terms/UBERON:0003903/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "aliases": ["4dn-dcic-lab:DT40-Cdk1as"], "accession": "4DNSRFB455CY", "cell_line": {"@type": ["OntologyTerm", "Item"], "status": "released", "preferred_name": "DT40", "term_name": "DT40", "term_id": "EFO:0006274", "uuid": "fd057734-0765-4007-b7eb-d71ac7cbef65", "@id": "/ontology-terms/EFO:0006274/", "display_title": "DT40", "slim_terms": [{"@id": "/ontology-terms/GO:0005623/", "@type": ["OntologyTerm", "Item"], "display_title": "cell", "status": "current", "uuid": "72e16a19-eef3-46ca-a1b8-20e646e69675", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@id": "/ontology-terms/CL:0000000/", "@type": ["OntologyTerm", "Item"], "display_title": "cell", "status": "released", "uuid": "45d2b02e-130b-40db-8bf2-2288c6c57dcf", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "individual": {"status": "released", "display_title": "4DNINYWTTO3D", "@type": ["IndividualChicken", "Individual", "Item"], "@id": "/individuals-chicken/4DNINYWTTO3D/", "uuid": "836856fd-a0f7-4daf-afb2-4a098df8e8fc", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "description": "DT40 line expressing Cdk1as transgene, which renders it sensitive to inhibition by 1NM-PP1", "date_created": "2018-10-30T15:04:12.407677+00:00", "submitted_by": {"error": "no view permissions"}, "last_modified": {"modified_by": {"error": "no view permissions"}, "date_modified": "2019-10-11T22:24:13.955875+00:00"}, "modifications": [{"uuid": "4dca1ddb-ab74-44f5-ac84-738b0198886d", "status": "released", "@type": ["Modification", "Item"], "display_title": "random integration of X. laevis Cdk1", "@id": "/modifications/4dca1ddb-ab74-44f5-ac84-738b0198886d/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "fb27fdf6-4199-4179-8bb0-6101b1404aee", "status": "released", "@type": ["Modification", "Item"], "display_title": "Crispr disruption for CDK1 chicken gene", "@id": "/modifications/fb27fdf6-4199-4179-8bb0-6101b1404aee/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "biosource_type": "immortalized cell line", "cell_line_tier": "Unclassified", "public_release": "2019-10-11", "schema_version": "2", "project_release": "2019-10-11", "@id": "/biosources/4DNSRFB455CY/", "@type": ["Biosource", "Item"], "uuid": "bdb9d92e-1f52-4e84-a484-78e595791e5e", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "display_title": "DT40 with random integration of X. laevis Cdk1, CDK1 disruption - 4DNSRFB455CY", "external_references": [], "biosource_name": "DT40 with random integration of X. laevis Cdk1, CDK1 disruption", "biosource_category": ["Other"], "organism": {"status": "released", "name": "chicken", "@id": "/organisms/9031/", "@type": ["Organism", "Item"], "uuid": "fed8c206-762f-497f-821b-1c8ff7900bd2", "display_title": "G. gallus", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "badges": [{"messages": ["Biosample missing Cell Culture Details"], "badge": {"badge_classification": "Warning", "uuid": "2b2cc7ff-b7a8-4138-9a6c-22884fc71690", "title": "Biosample Metadata Incomplete", "display_title": "Biosample Metadata Incomplete", "badge_icon": "/static/img/badges/biosample-icon.svg", "@id": "/badges/biosample-metadata-incomplete/", "status": "released", "warning": "Biosample Metadata Incomplete", "@type": ["Badge", "Item"], "description": "Biosample is missing metadata information required as part of the standards implemented by the 4DN Samples working group.", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "treatments": [{"description": "Synchronization with 1NM-PP1 fo 10 hours", "uuid": "6600f226-5817-4bb8-afb5-c412a7b39058", "duration_units": "hour", "@type": ["TreatmentAgent", "Treatment", "Item"], "concentration_units": "\u03bcM", "chemical": "1NM-PP1", "duration": 10.0, "@id": "/treatments-agent/6600f226-5817-4bb8-afb5-c412a7b39058/", "treatment_type": "Chemical", "display_title": "1NM-PP1 treatment (2.0 \u03bcM, 10.0h)", "concentration": 2.0, "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "description": "20150609-15m-R1", "sop_mapping": {"has_sop": "No"}, "date_created": "2018-10-30T15:05:10.656105+00:00", "submitted_by": {"error": "no view permissions"}, "last_modified": {"modified_by": {"error": "no view permissions"}, "date_modified": "2019-10-11T20:55:05.755493+00:00"}, "ligation_time": 240.0, "biotin_removed": "Yes", "digestion_time": 960.0, "public_release": "2019-10-11", "schema_version": "2", "tagging_method": "biotin-dCTP", "experiment_type": {"uuid": "832b7989-69ab-4bb6-97b9-195d5dd965ea", "status": "released", "assay_subclass_short": "Hi-C", "@id": "/experiment-types/dilution-hi-c/", "display_title": "Dilution Hi-C", "title": "Dilution Hi-C", "experiment_category": "Sequencing", "@type": ["ExperimentType", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "processed_files": [{"href": "/files-processed/4DNFIH225D5O/@@download/4DNFIH225D5O.bam", "open_data_url": "https://4dn-open-data-public.s3.amazonaws.com/fourfront-webprod/wfoutput/fa36151d-fad1-4a27-8f86-a0f9a4f4be9a/4DNFIH225D5O.bam", "file_classification": "processed file", "display_title": "4DNFIH225D5O.bam", "file_format": {"@id": "/file-formats/bam/", "status": "released", "uuid": "d13d06cf-218e-4f61-aaf0-91f226248b3c", "@type": ["FileFormat", "Item"], "display_title": "bam", "file_format": "bam", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "upload_key": "fa36151d-fad1-4a27-8f86-a0f9a4f4be9a/4DNFIH225D5O.bam", "file_size": 33815072591, "status": "released", "file_type_detailed": "alignments (bam)", "accession": "4DNFIH225D5O", "@type": ["FileProcessed", "File", "Item"], "file_type": "alignments", "uuid": "fa36151d-fad1-4a27-8f86-a0f9a4f4be9a", "@id": "/files-processed/4DNFIH225D5O/", "quality_metric": {"status": "released", "@id": "/quality-metrics-bamqc/9f632796-2672-4d20-9a06-908af28125d8/", "overall_quality_status": "PASS", "@type": ["QualityMetricBamqc", "QualityMetric", "Item"], "display_title": "QualityMetricBamqc from 2020-01-16", "uuid": "9f632796-2672-4d20-9a06-908af28125d8", "quality_metric_summary": [{"title": "Total Reads", "value": "147552791", "numberType": "integer"}, {"title": "Unmapped Reads", "value": "12.894", "tooltip": "Percent of total reads (=19.03m)", "numberType": "percent"}, {"title": "Multimapped Reads", "value": "7.92", "tooltip": "Percent of total reads (=11.69m)", "numberType": "percent"}, {"title": "Duplicate Reads", "value": "9.567", "tooltip": "Percent of total reads (=14.12m)", "numberType": "percent"}, {"title": "Walks", "value": "4.639", "tooltip": "Percent of total reads (=6.84m)", "numberType": "percent"}, {"title": "Minor Contigs", "value": "0.558", "tooltip": "Percent of total reads (=0.82m)", "numberType": "percent"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [], "track_and_facet_info": {"experimental_lab": "Job Dekker, UMMS", "experiment_type": "Dilution Hi-C", "experiment_bucket": "processed file", "assay_info": "HindIII", "dataset": "HiC on sync. chicken cells", "condition": "prometaphase (15m)", "replicate_info": "Biorep 1, Techrep 1", "biosource_name": "DT40 with random integration of X. laevis Cdk1, CDK1 disruption", "lab_name": "4DN DCIC, HMS"}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"href": "/files-processed/4DNFICYQIXPE/@@download/4DNFICYQIXPE.pairs.gz", "open_data_url": "https://4dn-open-data-public.s3.amazonaws.com/fourfront-webprod/wfoutput/c1847f6c-0a39-45f1-8abb-52eebebe28e5/4DNFICYQIXPE.pairs.gz", "file_classification": "processed file", "display_title": "4DNFICYQIXPE.pairs.gz", "file_format": {"@id": "/file-formats/pairs/", "status": "released", "uuid": "d13d06cf-218e-4f61-aaf0-91f226248b2c", "@type": ["FileFormat", "Item"], "display_title": "pairs", "file_format": "pairs", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "upload_key": "c1847f6c-0a39-45f1-8abb-52eebebe28e5/4DNFICYQIXPE.pairs.gz", "file_size": 1745281321, "status": "released", "file_type_detailed": "contact list-replicate (pairs)", "accession": "4DNFICYQIXPE", "@type": ["FileProcessed", "File", "Item"], "file_type": "contact list-replicate", "uuid": "c1847f6c-0a39-45f1-8abb-52eebebe28e5", "@id": "/files-processed/4DNFICYQIXPE/", "quality_metric": {"status": "released", "@id": "/quality-metrics-pairsqc/2d1fcb9d-168f-45a6-bbaf-14511a083511/", "overall_quality_status": "PASS", "@type": ["QualityMetricPairsqc", "QualityMetric", "Item"], "display_title": "QualityMetricPairsqc from 2019-02-11", "uuid": "2d1fcb9d-168f-45a6-bbaf-14511a083511", "Total reads": 95878726, "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFICYQIXPE/pairsqc_report.html", "quality_metric_summary": [{"title": "Filtered Reads", "value": "95878726", "numberType": "integer"}, {"title": "Cis reads (>20kb)", "value": "50.248", "tooltip": "Percent of filtered reads (=48.18m)", "numberType": "percent"}, {"title": "Short cis reads", "value": "35.239", "tooltip": "Percent of filtered reads (=33.79m)", "numberType": "percent"}, {"title": "Trans Reads", "value": "14.513", "tooltip": "Percent of filtered reads (=13.91m)", "numberType": "percent"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [], "track_and_facet_info": {"experimental_lab": "Job Dekker, UMMS", "experiment_type": "Dilution Hi-C", "experiment_bucket": "processed file", "assay_info": "HindIII", "dataset": "HiC on sync. chicken cells", "condition": "prometaphase (15m)", "replicate_info": "Biorep 1, Techrep 1", "biosource_name": "DT40 with random integration of X. laevis Cdk1, CDK1 disruption", "lab_name": "4DN DCIC, HMS"}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "project_release": "2019-10-11", "digestion_enzyme": {"@id": "/enzymes/HindIII/", "name": "HindIII", "display_title": "HindIII", "status": "released", "@type": ["Enzyme", "Item"], "uuid": "2ace2f00-c913-4bac-a6ef-0b316bc2108e", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "crosslinking_time": 10.0, "biosample_quantity": 13000000.0, "crosslinking_method": "1% Formaldehyde", "fragment_size_range": "150-350", "fragmentation_method": "sonication", "ligation_temperature": 16.0, "digestion_temperature": 37.0, "biosample_quantity_units": "cells", "crosslinking_temperature": 23.0, "library_preparation_date": "2015-06-09", "fragment_size_selection_method": "SPRI beads", "@id": "/experiments-hi-c/4DNEXMF73UXS/", "@type": ["ExperimentHiC", "Experiment", "Item"], "uuid": "3a54beae-1ead-4a51-96f7-7fc3a0ea2802", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "display_title": "Dilution Hi-C on DT40 with random integration of X. laevis Cdk1, CDK1 disruption with HindIII - 4DNEXMF73UXS", "external_references": [{"ref": "GEO:GSM2745848", "uri": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM2745848"}], "experiment_sets": [{"display_title": "4DNESIR416OW", "experimentset_type": "replicate", "@id": "/experiment-set-replicates/4DNESIR416OW/", "accession": "4DNESIR416OW", "status": "released", "uuid": "199ae07b-7cbf-48b3-9276-68f9725250e3", "@type": ["ExperimentSetReplicate", "ExperimentSet", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "produced_in_pub": {"journal": "Science (New York, N.Y.)", "authors": ["Gibcus JH", "Samejima K", "Goloborodko A", "Samejima I", "Naumova N", "Nuebler J", "Kanemaki MT", "Xie L", "Paulson JR", "Earnshaw WC", "Mirny LA", "Dekker J"], "@type": ["Publication", "Item"], "title": "A pathway for mitotic chromosome formation.", "date_published": "2018-02-09", "@id": "/publications/84fa5633-aac7-4cb3-b53b-0f0234ea06dd/", "uuid": "84fa5633-aac7-4cb3-b53b-0f0234ea06dd", "abstract": "Mitotic chromosomes fold as compact arrays of chromatin loops. To identify the pathway of mitotic chromosome formation, we combined imaging and Hi-C analysis of synchronous DT40 cell cultures with polymer simulations. Here we show that in prophase, the interphase organization is rapidly lost in a condensin-dependent manner, and arrays of consecutive 60-kilobase (kb) loops are formed. During prometaphase, ~80-kb inner loops are nested within ~400-kb outer loops. The loop  array acquires a helical arrangement with consecutive loops emanating from a central \"spiral staircase\" condensin scaffold. The size of helical turns progressively increases to ~12 megabases during prometaphase. Acute depletion of  condensin I or II shows that nested loops form by differential action of the two  condensins, whereas condensin II is required for helical winding.", "short_attribution": "Gibcus JH et al. (2018)", "status": "current", "ID": "PMID:29348367", "display_title": "Gibcus JH et al. (2018) PMID:29348367", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "publications_of_exp": [{"ID": "PMID:29348367", "short_attribution": "Gibcus JH et al. (2018)", "date_published": "2018-02-09", "display_title": "Gibcus JH et al. (2018) PMID:29348367", "status": "current", "@id": "/publications/84fa5633-aac7-4cb3-b53b-0f0234ea06dd/", "authors": ["Gibcus JH", "Samejima K", "Goloborodko A", "Samejima I", "Naumova N", "Nuebler J", "Kanemaki MT", "Xie L", "Paulson JR", "Earnshaw WC", "Mirny LA", "Dekker J"], "title": "A pathway for mitotic chromosome formation.", "uuid": "84fa5633-aac7-4cb3-b53b-0f0234ea06dd", "journal": "Science (New York, N.Y.)", "@type": ["Publication", "Item"], "abstract": "Mitotic chromosomes fold as compact arrays of chromatin loops. To identify the pathway of mitotic chromosome formation, we combined imaging and Hi-C analysis of synchronous DT40 cell cultures with polymer simulations. Here we show that in prophase, the interphase organization is rapidly lost in a condensin-dependent manner, and arrays of consecutive 60-kilobase (kb) loops are formed. During prometaphase, ~80-kb inner loops are nested within ~400-kb outer loops. The loop  array acquires a helical arrangement with consecutive loops emanating from a central \"spiral staircase\" condensin scaffold. The size of helical turns progressively increases to ~12 megabases during prometaphase. Acute depletion of  condensin I or II shows that nested loops form by differential action of the two  condensins, whereas condensin II is required for helical winding.", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "experiment_categorizer": {"field": "Enzyme", "value": "HindIII", "combined": "Enzyme: HindIII"}, "experiment_summary": "Dilution Hi-C on DT40 with random integration of X. laevis Cdk1, CDK1 disruption with HindIII", "@context": "/terms/", "aggregated-items": {"badges": [{"parent": "/biosamples/4DNBSUKOFFC2/", "embedded_path": "biosample.badges", "item": {"messages": ["Biosample missing Cell Culture Details"], "badge": {"commendation": null, "warning": "Biosample Metadata Incomplete", "uuid": "2b2cc7ff-b7a8-4138-9a6c-22884fc71690", "@id": "/badges/biosample-metadata-incomplete/", "badge_icon": "/static/img/badges/biosample-icon.svg", "description": "Biosample is missing metadata information required as part of the standards implemented by the 4DN Samples working group."}}}]}, "validation-errors": []}