{"lab": {"@id": "/labs/job-dekker-lab/", "@type": ["Lab", "Item"], "display_title": "Job Dekker, UMMS", "title": "Job Dekker, UMMS", "uuid": "3c577664-affb-41c4-bf27-9e21c2fc1554", "correspondence": [{"contact_email": "am9iLmRla2tlckB1bWFzc21lZC5lZHU=", "@id": "/users/83b5073a-069b-4162-9b30-6f42d5551e34/", "display_title": "Job Dekker"}], "status": "current", "pi": {"error": "no view permissions"}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin", "role.lab_submitter", "submits_for.3c577664-affb-41c4-bf27-9e21c2fc1554"]}}, "award": {"name": "external-award", "@type": ["Award", "Item"], "@id": "/awards/external-award/", "uuid": "12a92962-8265-4fc0-b2f8-cf14f05db58b", "status": "current", "display_title": "EXTERNAL AWARD", "project": "External", "center_title": "External", "center": "External", "description": "Funding source is from outside 4DN.", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "files": [{"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 182141506, "file_classification": "raw file", "href": "/files-fastq/4DNFIP3HK7TP/@@download/4DNFIP3HK7TP.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIP3HK7TP", "upload_key": "f4a710fe-d2fe-4a0b-bb08-8bc1e3b8ce98/4DNFIP3HK7TP.fastq.gz", "paired_end": "1", "status": "released", "uuid": "f4a710fe-d2fe-4a0b-bb08-8bc1e3b8ce98", "@id": "/files-fastq/4DNFIP3HK7TP/", "dbxrefs": ["SRA:SRR5939218"], "display_title": "4DNFIP3HK7TP.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/84c17922-3f31-4ceb-906d-14220d192d18/", "Sequence length": "50", "uuid": "84c17922-3f31-4ceb-906d-14220d192d18", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIP3HK7TP/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "a94ce196-d1d6-4e10-8b65-068f35886106", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFI8WV6UEP.fastq.gz", "accession": "4DNFI8WV6UEP", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFI8WV6UEP/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939218", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939218"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 183413734, "file_classification": "raw file", "href": "/files-fastq/4DNFI8WV6UEP/@@download/4DNFI8WV6UEP.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFI8WV6UEP", "upload_key": "a94ce196-d1d6-4e10-8b65-068f35886106/4DNFI8WV6UEP.fastq.gz", "paired_end": "2", "status": "released", "uuid": "a94ce196-d1d6-4e10-8b65-068f35886106", "@id": "/files-fastq/4DNFI8WV6UEP/", "dbxrefs": ["SRA:SRR5939218"], "display_title": "4DNFI8WV6UEP.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/52dbd9cb-e48c-415d-8695-c629c4bf04af/", "Sequence length": "50", "uuid": "52dbd9cb-e48c-415d-8695-c629c4bf04af", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI8WV6UEP/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "f4a710fe-d2fe-4a0b-bb08-8bc1e3b8ce98", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIP3HK7TP.fastq.gz", "accession": "4DNFIP3HK7TP", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFIP3HK7TP/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939218", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939218"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 183516097, "file_classification": "raw file", "href": "/files-fastq/4DNFIFOP9VZX/@@download/4DNFIFOP9VZX.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIFOP9VZX", "upload_key": "a4eba231-4861-4064-b129-e5914b8ced3f/4DNFIFOP9VZX.fastq.gz", "paired_end": "1", "status": "released", "uuid": "a4eba231-4861-4064-b129-e5914b8ced3f", "@id": "/files-fastq/4DNFIFOP9VZX/", "dbxrefs": ["SRA:SRR5939217"], "display_title": "4DNFIFOP9VZX.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/cebd2b7b-f883-43a0-b9bd-2a961c363071/", "Sequence length": "50", "uuid": "cebd2b7b-f883-43a0-b9bd-2a961c363071", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIFOP9VZX/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "f466bb44-1f0a-4608-b26a-54a4d9daa6e9", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFI7BMKTGU.fastq.gz", "accession": "4DNFI7BMKTGU", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFI7BMKTGU/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939217", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939217"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 184365297, "file_classification": "raw file", "href": "/files-fastq/4DNFI7BMKTGU/@@download/4DNFI7BMKTGU.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFI7BMKTGU", "upload_key": "f466bb44-1f0a-4608-b26a-54a4d9daa6e9/4DNFI7BMKTGU.fastq.gz", "paired_end": "2", "status": "released", "uuid": "f466bb44-1f0a-4608-b26a-54a4d9daa6e9", "@id": "/files-fastq/4DNFI7BMKTGU/", "dbxrefs": ["SRA:SRR5939217"], "display_title": "4DNFI7BMKTGU.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/a1523ce2-5b53-420a-8b99-3a4c96885eed/", "Sequence length": "50", "uuid": "a1523ce2-5b53-420a-8b99-3a4c96885eed", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI7BMKTGU/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "a4eba231-4861-4064-b129-e5914b8ced3f", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIFOP9VZX.fastq.gz", "accession": "4DNFIFOP9VZX", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFIFOP9VZX/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939217", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939217"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 182967583, "file_classification": "raw file", "href": "/files-fastq/4DNFIG99K9NS/@@download/4DNFIG99K9NS.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIG99K9NS", "upload_key": "10a3ae1a-8ad2-4d67-8300-cba1fb51d6eb/4DNFIG99K9NS.fastq.gz", "paired_end": "1", "status": "released", "uuid": "10a3ae1a-8ad2-4d67-8300-cba1fb51d6eb", "@id": "/files-fastq/4DNFIG99K9NS/", "dbxrefs": ["SRA:SRR5939214"], "display_title": "4DNFIG99K9NS.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/09dff00f-f534-46b3-b59c-06f806f5d492/", "Sequence length": "50", "uuid": "09dff00f-f534-46b3-b59c-06f806f5d492", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIG99K9NS/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "c6fc9aab-4344-4abd-ac26-d7123ecf4997", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIAEUJKXY.fastq.gz", "accession": "4DNFIAEUJKXY", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFIAEUJKXY/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939214", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939214"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 183992622, "file_classification": "raw file", "href": "/files-fastq/4DNFIAEUJKXY/@@download/4DNFIAEUJKXY.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIAEUJKXY", "upload_key": "c6fc9aab-4344-4abd-ac26-d7123ecf4997/4DNFIAEUJKXY.fastq.gz", "paired_end": "2", "status": "released", "uuid": "c6fc9aab-4344-4abd-ac26-d7123ecf4997", "@id": "/files-fastq/4DNFIAEUJKXY/", "dbxrefs": ["SRA:SRR5939214"], "display_title": "4DNFIAEUJKXY.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/8cf5c59f-b721-46dc-8dd2-a9c7da136927/", "Sequence length": "50", "uuid": "8cf5c59f-b721-46dc-8dd2-a9c7da136927", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIAEUJKXY/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "10a3ae1a-8ad2-4d67-8300-cba1fb51d6eb", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIG99K9NS.fastq.gz", "accession": "4DNFIG99K9NS", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFIG99K9NS/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939214", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939214"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 179922488, "file_classification": "raw file", "href": "/files-fastq/4DNFIAWP3HZC/@@download/4DNFIAWP3HZC.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIAWP3HZC", "upload_key": "3dca6e3c-65f0-43ae-a5e5-ad24fb3faf3c/4DNFIAWP3HZC.fastq.gz", "paired_end": "1", "status": "released", "uuid": "3dca6e3c-65f0-43ae-a5e5-ad24fb3faf3c", "@id": "/files-fastq/4DNFIAWP3HZC/", "dbxrefs": ["SRA:SRR5939213"], "display_title": "4DNFIAWP3HZC.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/c1f5b472-cb6c-43d9-bd43-b08877d2369a/", "Sequence length": "50", "uuid": "c1f5b472-cb6c-43d9-bd43-b08877d2369a", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIAWP3HZC/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "d3a501f8-c492-49f1-a488-3260f07f52b8", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIW5F66HH.fastq.gz", "accession": "4DNFIW5F66HH", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFIW5F66HH/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939213", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939213"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 180830617, "file_classification": "raw file", "href": "/files-fastq/4DNFIW5F66HH/@@download/4DNFIW5F66HH.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIW5F66HH", "upload_key": "d3a501f8-c492-49f1-a488-3260f07f52b8/4DNFIW5F66HH.fastq.gz", "paired_end": "2", "status": "released", "uuid": "d3a501f8-c492-49f1-a488-3260f07f52b8", "@id": "/files-fastq/4DNFIW5F66HH/", "dbxrefs": ["SRA:SRR5939213"], "display_title": "4DNFIW5F66HH.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/c0cbe707-1c86-4a57-ae68-dba894f40d35/", "Sequence length": "50", "uuid": "c0cbe707-1c86-4a57-ae68-dba894f40d35", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIW5F66HH/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-14", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "3dca6e3c-65f0-43ae-a5e5-ad24fb3faf3c", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIAWP3HZC.fastq.gz", "accession": "4DNFIAWP3HZC", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFIAWP3HZC/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939213", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939213"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 178900370, "file_classification": "raw file", "href": "/files-fastq/4DNFI5EXK8EK/@@download/4DNFI5EXK8EK.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFI5EXK8EK", "upload_key": "674c7564-751f-49d7-95e8-5d9b53965b61/4DNFI5EXK8EK.fastq.gz", "paired_end": "1", "status": "released", "uuid": "674c7564-751f-49d7-95e8-5d9b53965b61", "@id": "/files-fastq/4DNFI5EXK8EK/", "dbxrefs": ["SRA:SRR5939212"], "display_title": "4DNFI5EXK8EK.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/bf0c4726-6e9a-4c92-8966-ea46f4430bd5/", "Sequence length": "50", "uuid": "bf0c4726-6e9a-4c92-8966-ea46f4430bd5", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI5EXK8EK/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "0174dd85-7110-488d-9af3-55ace2089f13", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFI6K4QM8C.fastq.gz", "accession": "4DNFI6K4QM8C", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFI6K4QM8C/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939212", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939212"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 179735989, "file_classification": "raw file", "href": "/files-fastq/4DNFI6K4QM8C/@@download/4DNFI6K4QM8C.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFI6K4QM8C", "upload_key": "0174dd85-7110-488d-9af3-55ace2089f13/4DNFI6K4QM8C.fastq.gz", "paired_end": "2", "status": "released", "uuid": "0174dd85-7110-488d-9af3-55ace2089f13", "@id": "/files-fastq/4DNFI6K4QM8C/", "dbxrefs": ["SRA:SRR5939212"], "display_title": "4DNFI6K4QM8C.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/c62af262-4869-4882-89de-f6b972f03a9d/", "Sequence length": "50", "uuid": "c62af262-4869-4882-89de-f6b972f03a9d", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI6K4QM8C/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-14", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "674c7564-751f-49d7-95e8-5d9b53965b61", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFI5EXK8EK.fastq.gz", "accession": "4DNFI5EXK8EK", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFI5EXK8EK/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939212", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939212"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 198529656, "file_classification": "raw file", "href": "/files-fastq/4DNFIRYSQ3FX/@@download/4DNFIRYSQ3FX.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIRYSQ3FX", "upload_key": "cab56b04-7f2d-463b-9172-7cda5533e9b0/4DNFIRYSQ3FX.fastq.gz", "paired_end": "1", "status": "released", "uuid": "cab56b04-7f2d-463b-9172-7cda5533e9b0", "@id": "/files-fastq/4DNFIRYSQ3FX/", "dbxrefs": ["SRA:SRR5939211"], "display_title": "4DNFIRYSQ3FX.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/04e7470f-9d58-4e87-940c-51f656922183/", "Sequence length": "50", "uuid": "04e7470f-9d58-4e87-940c-51f656922183", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIRYSQ3FX/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "b86b41e5-d45e-44ca-b223-a385496060cb", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFICAZ42BA.fastq.gz", "accession": "4DNFICAZ42BA", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFICAZ42BA/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939211", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939211"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 197958186, "file_classification": "raw file", "href": "/files-fastq/4DNFICAZ42BA/@@download/4DNFICAZ42BA.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFICAZ42BA", "upload_key": "b86b41e5-d45e-44ca-b223-a385496060cb/4DNFICAZ42BA.fastq.gz", "paired_end": "2", "status": "released", "uuid": "b86b41e5-d45e-44ca-b223-a385496060cb", "@id": "/files-fastq/4DNFICAZ42BA/", "dbxrefs": ["SRA:SRR5939211"], "display_title": "4DNFICAZ42BA.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/a639c2a8-c128-4309-b53b-e92660f0095e/", "Sequence length": "50", "uuid": "a639c2a8-c128-4309-b53b-e92660f0095e", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFICAZ42BA/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "cab56b04-7f2d-463b-9172-7cda5533e9b0", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIRYSQ3FX.fastq.gz", "accession": "4DNFIRYSQ3FX", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFIRYSQ3FX/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939211", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939211"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 178633052, "file_classification": "raw file", "href": "/files-fastq/4DNFIG8DHZFX/@@download/4DNFIG8DHZFX.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIG8DHZFX", "upload_key": "42b470b6-3f6c-47b4-bcf7-76b824804226/4DNFIG8DHZFX.fastq.gz", "paired_end": "1", "status": "released", "uuid": "42b470b6-3f6c-47b4-bcf7-76b824804226", "@id": "/files-fastq/4DNFIG8DHZFX/", "dbxrefs": ["SRA:SRR5939210"], "display_title": "4DNFIG8DHZFX.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/9f44374e-e144-4ee1-ba7c-3f42fead711b/", "Sequence length": "50", "uuid": "9f44374e-e144-4ee1-ba7c-3f42fead711b", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIG8DHZFX/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "fc5f38e8-1551-480b-9745-ba9ea8eeac70", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIELXY63F.fastq.gz", "accession": "4DNFIELXY63F", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFIELXY63F/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939210", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939210"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 178826170, "file_classification": "raw file", "href": "/files-fastq/4DNFIELXY63F/@@download/4DNFIELXY63F.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIELXY63F", "upload_key": "fc5f38e8-1551-480b-9745-ba9ea8eeac70/4DNFIELXY63F.fastq.gz", "paired_end": "2", "status": "released", "uuid": "fc5f38e8-1551-480b-9745-ba9ea8eeac70", "@id": "/files-fastq/4DNFIELXY63F/", "dbxrefs": ["SRA:SRR5939210"], "display_title": "4DNFIELXY63F.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/52b7f615-e3ea-403a-b6e8-8e2eeee492ca/", "Sequence length": "50", "uuid": "52b7f615-e3ea-403a-b6e8-8e2eeee492ca", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIELXY63F/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "42b470b6-3f6c-47b4-bcf7-76b824804226", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIG8DHZFX.fastq.gz", "accession": "4DNFIG8DHZFX", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFIG8DHZFX/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939210", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939210"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 209424659, "file_classification": "raw file", "href": "/files-fastq/4DNFIDR388LF/@@download/4DNFIDR388LF.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIDR388LF", "upload_key": "dc67aa53-5ec2-462f-b28e-fa421f1be0e7/4DNFIDR388LF.fastq.gz", "paired_end": "1", "status": "released", "uuid": "dc67aa53-5ec2-462f-b28e-fa421f1be0e7", "@id": "/files-fastq/4DNFIDR388LF/", "dbxrefs": ["SRA:SRR5939209"], "display_title": "4DNFIDR388LF.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/1e8ccd8e-0824-47e4-be40-121b99750ad7/", "Sequence length": "50", "uuid": "1e8ccd8e-0824-47e4-be40-121b99750ad7", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIDR388LF/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "d650a89b-abf2-4fbf-8344-6d2c13ad2a06", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIDQ354FS.fastq.gz", "accession": "4DNFIDQ354FS", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFIDQ354FS/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939209", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939209"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 191316661, "file_classification": "raw file", "href": "/files-fastq/4DNFIDQ354FS/@@download/4DNFIDQ354FS.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIDQ354FS", "upload_key": "d650a89b-abf2-4fbf-8344-6d2c13ad2a06/4DNFIDQ354FS.fastq.gz", "paired_end": "2", "status": "released", "uuid": "d650a89b-abf2-4fbf-8344-6d2c13ad2a06", "@id": "/files-fastq/4DNFIDQ354FS/", "dbxrefs": ["SRA:SRR5939209"], "display_title": "4DNFIDQ354FS.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/546a8479-09f8-4ed1-99d5-eeb8e27a2070/", "Sequence length": "50", "uuid": "546a8479-09f8-4ed1-99d5-eeb8e27a2070", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIDQ354FS/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "dc67aa53-5ec2-462f-b28e-fa421f1be0e7", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIDR388LF.fastq.gz", "accession": "4DNFIDR388LF", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFIDR388LF/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939209", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939209"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 186713302, "file_classification": "raw file", "href": "/files-fastq/4DNFIDQ8TQPE/@@download/4DNFIDQ8TQPE.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIDQ8TQPE", "upload_key": "1eada543-6ee7-4b36-ad29-494f5a8fae28/4DNFIDQ8TQPE.fastq.gz", "paired_end": "1", "status": "released", "uuid": "1eada543-6ee7-4b36-ad29-494f5a8fae28", "@id": "/files-fastq/4DNFIDQ8TQPE/", "dbxrefs": ["SRA:SRR5939208"], "display_title": "4DNFIDQ8TQPE.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/668745ac-9e97-42d8-87f0-4fd6fc277974/", "Sequence length": "50", "uuid": "668745ac-9e97-42d8-87f0-4fd6fc277974", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIDQ8TQPE/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "220a326b-62e0-4922-82ec-aaec7e3b1d46", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFI8CKL2LT.fastq.gz", "accession": "4DNFI8CKL2LT", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFI8CKL2LT/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939208", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939208"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 188321694, "file_classification": "raw file", "href": "/files-fastq/4DNFI8CKL2LT/@@download/4DNFI8CKL2LT.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFI8CKL2LT", "upload_key": "220a326b-62e0-4922-82ec-aaec7e3b1d46/4DNFI8CKL2LT.fastq.gz", "paired_end": "2", "status": "released", "uuid": "220a326b-62e0-4922-82ec-aaec7e3b1d46", "@id": "/files-fastq/4DNFI8CKL2LT/", "dbxrefs": ["SRA:SRR5939208"], "display_title": "4DNFI8CKL2LT.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/e73930f2-f3dd-4cf2-baba-14fa958e3c48/", "Sequence length": "50", "uuid": "e73930f2-f3dd-4cf2-baba-14fa958e3c48", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI8CKL2LT/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "1eada543-6ee7-4b36-ad29-494f5a8fae28", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIDQ8TQPE.fastq.gz", "accession": "4DNFIDQ8TQPE", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFIDQ8TQPE/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939208", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939208"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 181198906, "file_classification": "raw file", "href": "/files-fastq/4DNFISG2OOPW/@@download/4DNFISG2OOPW.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFISG2OOPW", "upload_key": "426ace1f-b02a-4ff0-947e-41a4bed5eb28/4DNFISG2OOPW.fastq.gz", "paired_end": "1", "status": "released", "uuid": "426ace1f-b02a-4ff0-947e-41a4bed5eb28", "@id": "/files-fastq/4DNFISG2OOPW/", "dbxrefs": ["SRA:SRR5939207"], "display_title": "4DNFISG2OOPW.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/240125e7-885a-46fc-8ee0-508de4ee4ce9/", "Sequence length": "50", "uuid": "240125e7-885a-46fc-8ee0-508de4ee4ce9", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFISG2OOPW/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "e7138fea-99d6-4d44-a5ba-05fa88af42b1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIIBVRNOL.fastq.gz", "accession": "4DNFIIBVRNOL", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFIIBVRNOL/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939207", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939207"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 181628159, "file_classification": "raw file", "href": "/files-fastq/4DNFIIBVRNOL/@@download/4DNFIIBVRNOL.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIIBVRNOL", "upload_key": "e7138fea-99d6-4d44-a5ba-05fa88af42b1/4DNFIIBVRNOL.fastq.gz", "paired_end": "2", "status": "released", "uuid": "e7138fea-99d6-4d44-a5ba-05fa88af42b1", "@id": "/files-fastq/4DNFIIBVRNOL/", "dbxrefs": ["SRA:SRR5939207"], "display_title": "4DNFIIBVRNOL.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/11de36fb-1ae2-40ef-9e31-62d3bb0d026c/", "Sequence length": "50", "uuid": "11de36fb-1ae2-40ef-9e31-62d3bb0d026c", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIIBVRNOL/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "426ace1f-b02a-4ff0-947e-41a4bed5eb28", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFISG2OOPW.fastq.gz", "accession": "4DNFISG2OOPW", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFISG2OOPW/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939207", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939207"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 184600286, "file_classification": "raw file", "href": "/files-fastq/4DNFIHS3GFG9/@@download/4DNFIHS3GFG9.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIHS3GFG9", "upload_key": "8dc88fda-f4d6-4700-8203-14d4775cf74b/4DNFIHS3GFG9.fastq.gz", "paired_end": "1", "status": "released", "uuid": "8dc88fda-f4d6-4700-8203-14d4775cf74b", "@id": "/files-fastq/4DNFIHS3GFG9/", "dbxrefs": ["SRA:SRR5939206"], "display_title": "4DNFIHS3GFG9.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/7f9902fe-9712-42b8-bd44-2657e79075d6/", "Sequence length": "50", "uuid": "7f9902fe-9712-42b8-bd44-2657e79075d6", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIHS3GFG9/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "31a4d920-7e18-426f-a0a8-27d74554817b", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIZXHAKKP.fastq.gz", "accession": "4DNFIZXHAKKP", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFIZXHAKKP/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939206", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939206"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 186170852, "file_classification": "raw file", "href": "/files-fastq/4DNFIZXHAKKP/@@download/4DNFIZXHAKKP.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIZXHAKKP", "upload_key": "31a4d920-7e18-426f-a0a8-27d74554817b/4DNFIZXHAKKP.fastq.gz", "paired_end": "2", "status": "released", "uuid": "31a4d920-7e18-426f-a0a8-27d74554817b", "@id": "/files-fastq/4DNFIZXHAKKP/", "dbxrefs": ["SRA:SRR5939206"], "display_title": "4DNFIZXHAKKP.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/4d28e67b-9041-4705-9830-bd6af81d9982/", "Sequence length": "50", "uuid": "4d28e67b-9041-4705-9830-bd6af81d9982", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIZXHAKKP/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "8dc88fda-f4d6-4700-8203-14d4775cf74b", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIHS3GFG9.fastq.gz", "accession": "4DNFIHS3GFG9", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFIHS3GFG9/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939206", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939206"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 181973677, "file_classification": "raw file", "href": "/files-fastq/4DNFI8GG5O2L/@@download/4DNFI8GG5O2L.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFI8GG5O2L", "upload_key": "a446ef26-ecb2-4fed-81d5-9e65fd7a9802/4DNFI8GG5O2L.fastq.gz", "paired_end": "1", "status": "released", "uuid": "a446ef26-ecb2-4fed-81d5-9e65fd7a9802", "@id": "/files-fastq/4DNFI8GG5O2L/", "dbxrefs": ["SRA:SRR5939205"], "display_title": "4DNFI8GG5O2L.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/d1c03c51-bfb2-40cb-b58f-ad9f408b4870/", "Sequence length": "50", "uuid": "d1c03c51-bfb2-40cb-b58f-ad9f408b4870", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI8GG5O2L/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-14", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "5da255d9-2f24-440c-b0de-8da85ed64805", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIWM5YN7Y.fastq.gz", "accession": "4DNFIWM5YN7Y", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFIWM5YN7Y/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939205", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939205"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 202924899, "file_classification": "raw file", "href": "/files-fastq/4DNFIWM5YN7Y/@@download/4DNFIWM5YN7Y.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIWM5YN7Y", "upload_key": "5da255d9-2f24-440c-b0de-8da85ed64805/4DNFIWM5YN7Y.fastq.gz", "paired_end": "2", "status": "released", "uuid": "5da255d9-2f24-440c-b0de-8da85ed64805", "@id": "/files-fastq/4DNFIWM5YN7Y/", "dbxrefs": ["SRA:SRR5939205"], "display_title": "4DNFIWM5YN7Y.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/57c730dd-19e6-4af7-869e-0b5abcd50c96/", "Sequence length": "50", "uuid": "57c730dd-19e6-4af7-869e-0b5abcd50c96", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIWM5YN7Y/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "a446ef26-ecb2-4fed-81d5-9e65fd7a9802", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFI8GG5O2L.fastq.gz", "accession": "4DNFI8GG5O2L", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFI8GG5O2L/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939205", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939205"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 199843407, "file_classification": "raw file", "href": "/files-fastq/4DNFI6Q9IAVA/@@download/4DNFI6Q9IAVA.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFI6Q9IAVA", "upload_key": "1c1bdc83-463f-4ad1-84a6-6bc6729e02ab/4DNFI6Q9IAVA.fastq.gz", "paired_end": "1", "status": "released", "uuid": "1c1bdc83-463f-4ad1-84a6-6bc6729e02ab", "@id": "/files-fastq/4DNFI6Q9IAVA/", "dbxrefs": ["SRA:SRR5939204"], "display_title": "4DNFI6Q9IAVA.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/c8290c79-9bca-419a-bae5-e1b7468073c1/", "Sequence length": "50", "uuid": "c8290c79-9bca-419a-bae5-e1b7468073c1", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI6Q9IAVA/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-14", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "6371ded1-690a-479d-9b5b-e9745e2466b1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFITAMEV3K.fastq.gz", "accession": "4DNFITAMEV3K", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFITAMEV3K/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939204", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939204"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 201732623, "file_classification": "raw file", "href": "/files-fastq/4DNFITAMEV3K/@@download/4DNFITAMEV3K.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFITAMEV3K", "upload_key": "6371ded1-690a-479d-9b5b-e9745e2466b1/4DNFITAMEV3K.fastq.gz", "paired_end": "2", "status": "released", "uuid": "6371ded1-690a-479d-9b5b-e9745e2466b1", "@id": "/files-fastq/4DNFITAMEV3K/", "dbxrefs": ["SRA:SRR5939204"], "display_title": "4DNFITAMEV3K.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/df7c836b-5274-499b-b200-d06028a06099/", "Sequence length": "50", "uuid": "df7c836b-5274-499b-b200-d06028a06099", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFITAMEV3K/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "1c1bdc83-463f-4ad1-84a6-6bc6729e02ab", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFI6Q9IAVA.fastq.gz", "accession": "4DNFI6Q9IAVA", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFI6Q9IAVA/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939204", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939204"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 197791132, "file_classification": "raw file", "href": "/files-fastq/4DNFIA5NROX1/@@download/4DNFIA5NROX1.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIA5NROX1", "upload_key": "3b692c9f-0cf3-40e0-b7f6-822e36a3bef5/4DNFIA5NROX1.fastq.gz", "paired_end": "1", "status": "released", "uuid": "3b692c9f-0cf3-40e0-b7f6-822e36a3bef5", "@id": "/files-fastq/4DNFIA5NROX1/", "dbxrefs": ["SRA:SRR5939203"], "display_title": "4DNFIA5NROX1.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/85be9b7c-3d4f-4e65-944e-056e899a6dcd/", "Sequence length": "50", "uuid": "85be9b7c-3d4f-4e65-944e-056e899a6dcd", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIA5NROX1/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "b0606e81-b79b-427e-ac39-00509da3fc96", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIOGMTYCT.fastq.gz", "accession": "4DNFIOGMTYCT", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFIOGMTYCT/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939203", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939203"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 179869278, "file_classification": "raw file", "href": "/files-fastq/4DNFIOGMTYCT/@@download/4DNFIOGMTYCT.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIOGMTYCT", "upload_key": "b0606e81-b79b-427e-ac39-00509da3fc96/4DNFIOGMTYCT.fastq.gz", "paired_end": "2", "status": "released", "uuid": "b0606e81-b79b-427e-ac39-00509da3fc96", "@id": "/files-fastq/4DNFIOGMTYCT/", "dbxrefs": ["SRA:SRR5939203"], "display_title": "4DNFIOGMTYCT.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/51bd9712-b713-4255-91ab-4ae6627cb6b7/", "Sequence length": "50", "uuid": "51bd9712-b713-4255-91ab-4ae6627cb6b7", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIOGMTYCT/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-14", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "3b692c9f-0cf3-40e0-b7f6-822e36a3bef5", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIA5NROX1.fastq.gz", "accession": "4DNFIA5NROX1", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFIA5NROX1/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939203", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939203"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 181580459, "file_classification": "raw file", "href": "/files-fastq/4DNFIMXX9ESY/@@download/4DNFIMXX9ESY.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIMXX9ESY", "upload_key": "608a7369-92f7-4e05-8269-deb3f37139db/4DNFIMXX9ESY.fastq.gz", "paired_end": "1", "status": "released", "uuid": "608a7369-92f7-4e05-8269-deb3f37139db", "@id": "/files-fastq/4DNFIMXX9ESY/", "dbxrefs": ["SRA:SRR5939202"], "display_title": "4DNFIMXX9ESY.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/f2280405-1d9b-48f4-92d0-7a0a65bc4456/", "Sequence length": "50", "uuid": "f2280405-1d9b-48f4-92d0-7a0a65bc4456", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIMXX9ESY/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "ec20d841-aca8-4a2c-9077-1359eb8271c6", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIROGQ9PF.fastq.gz", "accession": "4DNFIROGQ9PF", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFIROGQ9PF/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939202", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939202"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 182841910, "file_classification": "raw file", "href": "/files-fastq/4DNFIROGQ9PF/@@download/4DNFIROGQ9PF.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIROGQ9PF", "upload_key": "ec20d841-aca8-4a2c-9077-1359eb8271c6/4DNFIROGQ9PF.fastq.gz", "paired_end": "2", "status": "released", "uuid": "ec20d841-aca8-4a2c-9077-1359eb8271c6", "@id": "/files-fastq/4DNFIROGQ9PF/", "dbxrefs": ["SRA:SRR5939202"], "display_title": "4DNFIROGQ9PF.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/58d2ef2c-9584-4479-b8bc-e8e354b4aa0b/", "Sequence length": "50", "uuid": "58d2ef2c-9584-4479-b8bc-e8e354b4aa0b", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIROGQ9PF/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-14", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "608a7369-92f7-4e05-8269-deb3f37139db", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIMXX9ESY.fastq.gz", "accession": "4DNFIMXX9ESY", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFIMXX9ESY/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939202", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939202"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 191620335, "file_classification": "raw file", "href": "/files-fastq/4DNFI76XO9ID/@@download/4DNFI76XO9ID.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFI76XO9ID", "upload_key": "7267cfc8-62c9-41b6-9d4f-b047c2b3c4d8/4DNFI76XO9ID.fastq.gz", "paired_end": "1", "status": "released", "uuid": "7267cfc8-62c9-41b6-9d4f-b047c2b3c4d8", "@id": "/files-fastq/4DNFI76XO9ID/", "dbxrefs": ["SRA:SRR5939201"], "display_title": "4DNFI76XO9ID.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/7533fee4-ea15-45f3-aede-05bc0c8fd43d/", "Sequence length": "50", "uuid": "7533fee4-ea15-45f3-aede-05bc0c8fd43d", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI76XO9ID/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-14", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "15810411-6d88-49cf-a171-ad5fe533cdb7", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIWG72MWX.fastq.gz", "accession": "4DNFIWG72MWX", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFIWG72MWX/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939201", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939201"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 193526214, "file_classification": "raw file", "href": "/files-fastq/4DNFIWG72MWX/@@download/4DNFIWG72MWX.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIWG72MWX", "upload_key": "15810411-6d88-49cf-a171-ad5fe533cdb7/4DNFIWG72MWX.fastq.gz", "paired_end": "2", "status": "released", "uuid": "15810411-6d88-49cf-a171-ad5fe533cdb7", "@id": "/files-fastq/4DNFIWG72MWX/", "dbxrefs": ["SRA:SRR5939201"], "display_title": "4DNFIWG72MWX.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/53f1e8f3-5db1-445f-858c-e60b85a7e4b8/", "Sequence length": "50", "uuid": "53f1e8f3-5db1-445f-858c-e60b85a7e4b8", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIWG72MWX/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "7267cfc8-62c9-41b6-9d4f-b047c2b3c4d8", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFI76XO9ID.fastq.gz", "accession": "4DNFI76XO9ID", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFI76XO9ID/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939201", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939201"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 188674132, "file_classification": "raw file", "href": "/files-fastq/4DNFI3RHRAEZ/@@download/4DNFI3RHRAEZ.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFI3RHRAEZ", "upload_key": "cc56ae70-4e96-4bb6-a1ea-ac61c6f505f1/4DNFI3RHRAEZ.fastq.gz", "paired_end": "1", "status": "released", "uuid": "cc56ae70-4e96-4bb6-a1ea-ac61c6f505f1", "@id": "/files-fastq/4DNFI3RHRAEZ/", "dbxrefs": ["SRA:SRR5939200"], "display_title": "4DNFI3RHRAEZ.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/c2c08c87-c863-4d29-af48-41d2f0b026e6/", "Sequence length": "50", "uuid": "c2c08c87-c863-4d29-af48-41d2f0b026e6", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI3RHRAEZ/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "298d2301-9c51-455e-93c4-8cd08d875a5d", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIAR7LBAV.fastq.gz", "accession": "4DNFIAR7LBAV", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFIAR7LBAV/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939200", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939200"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 190490633, "file_classification": "raw file", "href": "/files-fastq/4DNFIAR7LBAV/@@download/4DNFIAR7LBAV.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIAR7LBAV", "upload_key": "298d2301-9c51-455e-93c4-8cd08d875a5d/4DNFIAR7LBAV.fastq.gz", "paired_end": "2", "status": "released", "uuid": "298d2301-9c51-455e-93c4-8cd08d875a5d", "@id": "/files-fastq/4DNFIAR7LBAV/", "dbxrefs": ["SRA:SRR5939200"], "display_title": "4DNFIAR7LBAV.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/2a6f876c-69d7-4600-a2c3-0ce2d6169eeb/", "Sequence length": "50", "uuid": "2a6f876c-69d7-4600-a2c3-0ce2d6169eeb", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIAR7LBAV/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-14", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "cc56ae70-4e96-4bb6-a1ea-ac61c6f505f1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFI3RHRAEZ.fastq.gz", "accession": "4DNFI3RHRAEZ", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFI3RHRAEZ/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939200", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939200"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 186349208, "file_classification": "raw file", "href": "/files-fastq/4DNFI3WKL3WW/@@download/4DNFI3WKL3WW.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFI3WKL3WW", "upload_key": "eaf10af0-6ddc-4045-ab00-1f4abcd957e9/4DNFI3WKL3WW.fastq.gz", "paired_end": "1", "status": "released", "uuid": "eaf10af0-6ddc-4045-ab00-1f4abcd957e9", "@id": "/files-fastq/4DNFI3WKL3WW/", "dbxrefs": ["SRA:SRR5939199"], "display_title": "4DNFI3WKL3WW.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/2b8c3082-668c-408e-89d9-143cf464f0af/", "Sequence length": "50", "uuid": "2b8c3082-668c-408e-89d9-143cf464f0af", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI3WKL3WW/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "20c5ebb3-2f4a-40b6-a29c-19201542de8f", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIANGZN7J.fastq.gz", "accession": "4DNFIANGZN7J", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFIANGZN7J/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939199", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939199"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 188168377, "file_classification": "raw file", "href": "/files-fastq/4DNFIANGZN7J/@@download/4DNFIANGZN7J.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIANGZN7J", "upload_key": "20c5ebb3-2f4a-40b6-a29c-19201542de8f/4DNFIANGZN7J.fastq.gz", "paired_end": "2", "status": "released", "uuid": "20c5ebb3-2f4a-40b6-a29c-19201542de8f", "@id": "/files-fastq/4DNFIANGZN7J/", "dbxrefs": ["SRA:SRR5939199"], "display_title": "4DNFIANGZN7J.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/31bff414-a7a1-4c35-b904-32c922bc67d7/", "Sequence length": "50", "uuid": "31bff414-a7a1-4c35-b904-32c922bc67d7", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIANGZN7J/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "eaf10af0-6ddc-4045-ab00-1f4abcd957e9", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFI3WKL3WW.fastq.gz", "accession": "4DNFI3WKL3WW", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFI3WKL3WW/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939199", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939199"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 203622150, "file_classification": "raw file", "href": "/files-fastq/4DNFI6EEG9HT/@@download/4DNFI6EEG9HT.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFI6EEG9HT", "upload_key": "3ecd8ef9-8261-45c2-83d9-4b898ab22966/4DNFI6EEG9HT.fastq.gz", "paired_end": "1", "status": "released", "uuid": "3ecd8ef9-8261-45c2-83d9-4b898ab22966", "@id": "/files-fastq/4DNFI6EEG9HT/", "dbxrefs": ["SRA:SRR5939198"], "display_title": "4DNFI6EEG9HT.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/effc60a3-e477-4b7e-8d78-fd646fd7ef25/", "Sequence length": "50", "uuid": "effc60a3-e477-4b7e-8d78-fd646fd7ef25", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI6EEG9HT/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-14", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "29237642-b564-446d-8bdf-b237b1fc6000", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIREYMEQC.fastq.gz", "accession": "4DNFIREYMEQC", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFIREYMEQC/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939198", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939198"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 185588613, "file_classification": "raw file", "href": "/files-fastq/4DNFIREYMEQC/@@download/4DNFIREYMEQC.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIREYMEQC", "upload_key": "29237642-b564-446d-8bdf-b237b1fc6000/4DNFIREYMEQC.fastq.gz", "paired_end": "2", "status": "released", "uuid": "29237642-b564-446d-8bdf-b237b1fc6000", "@id": "/files-fastq/4DNFIREYMEQC/", "dbxrefs": ["SRA:SRR5939198"], "display_title": "4DNFIREYMEQC.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/11124fb9-c3a9-46c3-b227-facff89a1c79/", "Sequence length": "50", "uuid": "11124fb9-c3a9-46c3-b227-facff89a1c79", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIREYMEQC/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "3ecd8ef9-8261-45c2-83d9-4b898ab22966", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFI6EEG9HT.fastq.gz", "accession": "4DNFI6EEG9HT", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFI6EEG9HT/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939198", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939198"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 182774817, "file_classification": "raw file", "href": "/files-fastq/4DNFIYWC4CPY/@@download/4DNFIYWC4CPY.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIYWC4CPY", "upload_key": "2c39862a-a997-40fb-9131-24da1f686128/4DNFIYWC4CPY.fastq.gz", "paired_end": "1", "status": "released", "uuid": "2c39862a-a997-40fb-9131-24da1f686128", "@id": "/files-fastq/4DNFIYWC4CPY/", "dbxrefs": ["SRA:SRR5939197"], "display_title": "4DNFIYWC4CPY.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/9b293515-3faa-4286-9f74-20595df8e1eb/", "Sequence length": "50", "uuid": "9b293515-3faa-4286-9f74-20595df8e1eb", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIYWC4CPY/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "d6b4e788-194f-4c9b-8934-31f16d86dc72", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIT2C8UOH.fastq.gz", "accession": "4DNFIT2C8UOH", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFIT2C8UOH/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939197", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939197"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 184641906, "file_classification": "raw file", "href": "/files-fastq/4DNFIT2C8UOH/@@download/4DNFIT2C8UOH.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIT2C8UOH", "upload_key": "d6b4e788-194f-4c9b-8934-31f16d86dc72/4DNFIT2C8UOH.fastq.gz", "paired_end": "2", "status": "released", "uuid": "d6b4e788-194f-4c9b-8934-31f16d86dc72", "@id": "/files-fastq/4DNFIT2C8UOH/", "dbxrefs": ["SRA:SRR5939197"], "display_title": "4DNFIT2C8UOH.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/4c3c904b-fdaf-40b8-8460-4c35e5856fcb/", "Sequence length": "50", "uuid": "4c3c904b-fdaf-40b8-8460-4c35e5856fcb", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIT2C8UOH/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "2c39862a-a997-40fb-9131-24da1f686128", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIYWC4CPY.fastq.gz", "accession": "4DNFIYWC4CPY", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFIYWC4CPY/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939197", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939197"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 179978451, "file_classification": "raw file", "href": "/files-fastq/4DNFIKYDFNYD/@@download/4DNFIKYDFNYD.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIKYDFNYD", "upload_key": "cb5d1ca3-3dd9-4bda-a039-82456903e96e/4DNFIKYDFNYD.fastq.gz", "paired_end": "1", "status": "released", "uuid": "cb5d1ca3-3dd9-4bda-a039-82456903e96e", "@id": "/files-fastq/4DNFIKYDFNYD/", "dbxrefs": ["SRA:SRR5939196"], "display_title": "4DNFIKYDFNYD.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/f7bc1fad-4855-495d-876d-bd25e777dfe6/", "Sequence length": "50", "uuid": "f7bc1fad-4855-495d-876d-bd25e777dfe6", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIKYDFNYD/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-14", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "db5260dd-1780-4d2c-b425-f616db15fa16", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIUR9N3VB.fastq.gz", "accession": "4DNFIUR9N3VB", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFIUR9N3VB/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939196", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939196"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 200266282, "file_classification": "raw file", "href": "/files-fastq/4DNFIUR9N3VB/@@download/4DNFIUR9N3VB.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIUR9N3VB", "upload_key": "db5260dd-1780-4d2c-b425-f616db15fa16/4DNFIUR9N3VB.fastq.gz", "paired_end": "2", "status": "released", "uuid": "db5260dd-1780-4d2c-b425-f616db15fa16", "@id": "/files-fastq/4DNFIUR9N3VB/", "dbxrefs": ["SRA:SRR5939196"], "display_title": "4DNFIUR9N3VB.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/367f9941-3b91-44e3-b85a-46c40e0f9f15/", "Sequence length": "50", "uuid": "367f9941-3b91-44e3-b85a-46c40e0f9f15", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIUR9N3VB/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-14", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "cb5d1ca3-3dd9-4bda-a039-82456903e96e", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIKYDFNYD.fastq.gz", "accession": "4DNFIKYDFNYD", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFIKYDFNYD/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939196", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939196"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 179092735, "file_classification": "raw file", "href": "/files-fastq/4DNFIYOSS6WT/@@download/4DNFIYOSS6WT.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIYOSS6WT", "upload_key": "793426fe-2a23-4283-959f-8aca6888524a/4DNFIYOSS6WT.fastq.gz", "paired_end": "1", "status": "released", "uuid": "793426fe-2a23-4283-959f-8aca6888524a", "@id": "/files-fastq/4DNFIYOSS6WT/", "dbxrefs": ["SRA:SRR5939220"], "display_title": "4DNFIYOSS6WT.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/669cabab-1fa5-46f5-bd4f-3723b0bacf25/", "Sequence length": "50", "uuid": "669cabab-1fa5-46f5-bd4f-3723b0bacf25", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIYOSS6WT/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "2ee84391-ba0a-48f1-8a29-de176f6a0c02", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIW2ANF4B.fastq.gz", "accession": "4DNFIW2ANF4B", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFIW2ANF4B/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939220", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939220"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 179943894, "file_classification": "raw file", "href": "/files-fastq/4DNFIW2ANF4B/@@download/4DNFIW2ANF4B.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIW2ANF4B", "upload_key": "2ee84391-ba0a-48f1-8a29-de176f6a0c02/4DNFIW2ANF4B.fastq.gz", "paired_end": "2", "status": "released", "uuid": "2ee84391-ba0a-48f1-8a29-de176f6a0c02", "@id": "/files-fastq/4DNFIW2ANF4B/", "dbxrefs": ["SRA:SRR5939220"], "display_title": "4DNFIW2ANF4B.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/6f63e52b-0c2a-41c6-936f-8d81119228d9/", "Sequence length": "50", "uuid": "6f63e52b-0c2a-41c6-936f-8d81119228d9", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIW2ANF4B/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "793426fe-2a23-4283-959f-8aca6888524a", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIYOSS6WT.fastq.gz", "accession": "4DNFIYOSS6WT", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFIYOSS6WT/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939220", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939220"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 195076737, "file_classification": "raw file", "href": "/files-fastq/4DNFIPOCEYYV/@@download/4DNFIPOCEYYV.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIPOCEYYV", "upload_key": "c21b82b2-b8b9-436f-b43d-bdb580110f1f/4DNFIPOCEYYV.fastq.gz", "paired_end": "1", "status": "released", "uuid": "c21b82b2-b8b9-436f-b43d-bdb580110f1f", "@id": "/files-fastq/4DNFIPOCEYYV/", "dbxrefs": ["SRA:SRR5939219"], "display_title": "4DNFIPOCEYYV.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/e43c64d4-2768-45e2-8f4c-de06264c1052/", "Sequence length": "50", "uuid": "e43c64d4-2768-45e2-8f4c-de06264c1052", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIPOCEYYV/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "50c30b47-0c64-4a5d-81fa-039e68252974", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFI29SX1O3.fastq.gz", "accession": "4DNFI29SX1O3", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFI29SX1O3/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939219", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939219"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 195952256, "file_classification": "raw file", "href": "/files-fastq/4DNFI29SX1O3/@@download/4DNFI29SX1O3.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFI29SX1O3", "upload_key": "50c30b47-0c64-4a5d-81fa-039e68252974/4DNFI29SX1O3.fastq.gz", "paired_end": "2", "status": "released", "uuid": "50c30b47-0c64-4a5d-81fa-039e68252974", "@id": "/files-fastq/4DNFI29SX1O3/", "dbxrefs": ["SRA:SRR5939219"], "display_title": "4DNFI29SX1O3.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/2eb27d45-ea22-421b-98f1-610ed82f9cfa/", "Sequence length": "50", "uuid": "2eb27d45-ea22-421b-98f1-610ed82f9cfa", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI29SX1O3/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "c21b82b2-b8b9-436f-b43d-bdb580110f1f", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIPOCEYYV.fastq.gz", "accession": "4DNFIPOCEYYV", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFIPOCEYYV/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939219", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939219"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 198067531, "file_classification": "raw file", "href": "/files-fastq/4DNFIZGJQVCZ/@@download/4DNFIZGJQVCZ.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIZGJQVCZ", "upload_key": "373a36a3-c19a-439b-89fc-c4cb9399ebd7/4DNFIZGJQVCZ.fastq.gz", "paired_end": "1", "status": "released", "uuid": "373a36a3-c19a-439b-89fc-c4cb9399ebd7", "@id": "/files-fastq/4DNFIZGJQVCZ/", "dbxrefs": ["SRA:SRR5939221"], "display_title": "4DNFIZGJQVCZ.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/ad78949a-688e-45d7-98e2-de5b76244e8d/", "Sequence length": "50", "uuid": "ad78949a-688e-45d7-98e2-de5b76244e8d", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIZGJQVCZ/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "7ffdcb45-9f62-4b02-8727-1841af3d79be", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFINKDOKFB.fastq.gz", "accession": "4DNFINKDOKFB", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFINKDOKFB/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939221", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939221"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 179585524, "file_classification": "raw file", "href": "/files-fastq/4DNFINKDOKFB/@@download/4DNFINKDOKFB.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFINKDOKFB", "upload_key": "7ffdcb45-9f62-4b02-8727-1841af3d79be/4DNFINKDOKFB.fastq.gz", "paired_end": "2", "status": "released", "uuid": "7ffdcb45-9f62-4b02-8727-1841af3d79be", "@id": "/files-fastq/4DNFINKDOKFB/", "dbxrefs": ["SRA:SRR5939221"], "display_title": "4DNFINKDOKFB.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/9f550f2a-9366-4ce4-aaf1-df79e91bf195/", "Sequence length": "50", "uuid": "9f550f2a-9366-4ce4-aaf1-df79e91bf195", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFINKDOKFB/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-14", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "373a36a3-c19a-439b-89fc-c4cb9399ebd7", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIZGJQVCZ.fastq.gz", "accession": "4DNFIZGJQVCZ", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFIZGJQVCZ/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939221", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939221"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 200030153, "file_classification": "raw file", "href": "/files-fastq/4DNFIAO3XHZ4/@@download/4DNFIAO3XHZ4.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIAO3XHZ4", "upload_key": "74f29a2c-182a-4457-92f3-57ccf6db50c9/4DNFIAO3XHZ4.fastq.gz", "paired_end": "1", "status": "released", "uuid": "74f29a2c-182a-4457-92f3-57ccf6db50c9", "@id": "/files-fastq/4DNFIAO3XHZ4/", "dbxrefs": ["SRA:SRR5939222"], "display_title": "4DNFIAO3XHZ4.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/d86a0694-c8ac-48c5-a92d-abf310028a4a/", "Sequence length": "50", "uuid": "d86a0694-c8ac-48c5-a92d-abf310028a4a", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIAO3XHZ4/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-14", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "970f3b2a-cb38-4968-986b-226f20ff9ae3", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIEAKRY4F.fastq.gz", "accession": "4DNFIEAKRY4F", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFIEAKRY4F/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939222", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939222"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 181825471, "file_classification": "raw file", "href": "/files-fastq/4DNFIEAKRY4F/@@download/4DNFIEAKRY4F.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIEAKRY4F", "upload_key": "970f3b2a-cb38-4968-986b-226f20ff9ae3/4DNFIEAKRY4F.fastq.gz", "paired_end": "2", "status": "released", "uuid": "970f3b2a-cb38-4968-986b-226f20ff9ae3", "@id": "/files-fastq/4DNFIEAKRY4F/", "dbxrefs": ["SRA:SRR5939222"], "display_title": "4DNFIEAKRY4F.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/f06a7a9a-1a2d-45b3-89ef-81d21ff0b0f0/", "Sequence length": "50", "uuid": "f06a7a9a-1a2d-45b3-89ef-81d21ff0b0f0", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIEAKRY4F/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-14", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "74f29a2c-182a-4457-92f3-57ccf6db50c9", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIAO3XHZ4.fastq.gz", "accession": "4DNFIAO3XHZ4", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFIAO3XHZ4/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939222", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939222"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 208819960, "file_classification": "raw file", "href": "/files-fastq/4DNFIXXLH9EU/@@download/4DNFIXXLH9EU.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIXXLH9EU", "upload_key": "1fbe2a37-35e4-49f4-b195-2dc98aa20b72/4DNFIXXLH9EU.fastq.gz", "paired_end": "1", "status": "released", "uuid": "1fbe2a37-35e4-49f4-b195-2dc98aa20b72", "@id": "/files-fastq/4DNFIXXLH9EU/", "dbxrefs": ["SRA:SRR5939216"], "display_title": "4DNFIXXLH9EU.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/e31b2a2f-62fb-4b57-a26f-7d508f608041/", "Sequence length": "50", "uuid": "e31b2a2f-62fb-4b57-a26f-7d508f608041", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIXXLH9EU/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "cb2e748f-2665-49be-a383-74dc7669eec1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIKOF64BP.fastq.gz", "accession": "4DNFIKOF64BP", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFIKOF64BP/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939216", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939216"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 210836651, "file_classification": "raw file", "href": "/files-fastq/4DNFIKOF64BP/@@download/4DNFIKOF64BP.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIKOF64BP", "upload_key": "cb2e748f-2665-49be-a383-74dc7669eec1/4DNFIKOF64BP.fastq.gz", "paired_end": "2", "status": "released", "uuid": "cb2e748f-2665-49be-a383-74dc7669eec1", "@id": "/files-fastq/4DNFIKOF64BP/", "dbxrefs": ["SRA:SRR5939216"], "display_title": "4DNFIKOF64BP.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/602d122a-6173-4b71-9061-2be2b43067a8/", "Sequence length": "50", "uuid": "602d122a-6173-4b71-9061-2be2b43067a8", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIKOF64BP/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "1fbe2a37-35e4-49f4-b195-2dc98aa20b72", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIXXLH9EU.fastq.gz", "accession": "4DNFIXXLH9EU", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFIXXLH9EU/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939216", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939216"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 185389638, "file_classification": "raw file", "href": "/files-fastq/4DNFIISHG1OF/@@download/4DNFIISHG1OF.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIISHG1OF", "upload_key": "ef29d99f-ae19-4c22-8b4f-3961491f956d/4DNFIISHG1OF.fastq.gz", "paired_end": "1", "status": "released", "uuid": "ef29d99f-ae19-4c22-8b4f-3961491f956d", "@id": "/files-fastq/4DNFIISHG1OF/", "dbxrefs": ["SRA:SRR5939215"], "display_title": "4DNFIISHG1OF.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/42090ba9-35d8-464b-bc5a-f605c52ded58/", "Sequence length": "50", "uuid": "42090ba9-35d8-464b-bc5a-f605c52ded58", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIISHG1OF/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-14", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "9a4d17b0-3098-4d7a-8e48-c58c93b335f9", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFISF35UA6.fastq.gz", "accession": "4DNFISF35UA6", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFISF35UA6/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939215", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939215"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 186202908, "file_classification": "raw file", "href": "/files-fastq/4DNFISF35UA6/@@download/4DNFISF35UA6.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFISF35UA6", "upload_key": "9a4d17b0-3098-4d7a-8e48-c58c93b335f9/4DNFISF35UA6.fastq.gz", "paired_end": "2", "status": "released", "uuid": "9a4d17b0-3098-4d7a-8e48-c58c93b335f9", "@id": "/files-fastq/4DNFISF35UA6/", "dbxrefs": ["SRA:SRR5939215"], "display_title": "4DNFISF35UA6.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/bedd522a-5bd6-4c79-8746-a085e4ed343b/", "Sequence length": "50", "uuid": "bedd522a-5bd6-4c79-8746-a085e4ed343b", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFISF35UA6/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "ef29d99f-ae19-4c22-8b4f-3961491f956d", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIISHG1OF.fastq.gz", "accession": "4DNFIISHG1OF", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFIISHG1OF/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939215", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939215"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 183576549, "file_classification": "raw file", "href": "/files-fastq/4DNFIF148ZOL/@@download/4DNFIF148ZOL.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIF148ZOL", "upload_key": "1443b193-fdd5-40aa-8de4-5bfa17006d42/4DNFIF148ZOL.fastq.gz", "paired_end": "1", "status": "released", "uuid": "1443b193-fdd5-40aa-8de4-5bfa17006d42", "@id": "/files-fastq/4DNFIF148ZOL/", "dbxrefs": ["SRA:SRR5939223"], "display_title": "4DNFIF148ZOL.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/e4e23756-3c35-45c0-a74f-0f19da59a59e/", "Sequence length": "50", "uuid": "e4e23756-3c35-45c0-a74f-0f19da59a59e", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIF148ZOL/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "5c3cfee3-f394-4e7a-8d34-cc0bfb18ffa0", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFI6D2A9QB.fastq.gz", "accession": "4DNFI6D2A9QB", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFI6D2A9QB/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939223", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939223"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 185255071, "file_classification": "raw file", "href": "/files-fastq/4DNFI6D2A9QB/@@download/4DNFI6D2A9QB.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFI6D2A9QB", "upload_key": "5c3cfee3-f394-4e7a-8d34-cc0bfb18ffa0/4DNFI6D2A9QB.fastq.gz", "paired_end": "2", "status": "released", "uuid": "5c3cfee3-f394-4e7a-8d34-cc0bfb18ffa0", "@id": "/files-fastq/4DNFI6D2A9QB/", "dbxrefs": ["SRA:SRR5939223"], "display_title": "4DNFI6D2A9QB.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/98baf0bf-3ff0-4139-82a0-3f553aa16510/", "Sequence length": "50", "uuid": "98baf0bf-3ff0-4139-82a0-3f553aa16510", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI6D2A9QB/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "1443b193-fdd5-40aa-8de4-5bfa17006d42", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIF148ZOL.fastq.gz", "accession": "4DNFIF148ZOL", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFIF148ZOL/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939223", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939223"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 205762937, "file_classification": "raw file", "href": "/files-fastq/4DNFI26F3SXL/@@download/4DNFI26F3SXL.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFI26F3SXL", "upload_key": "be36f915-9ccc-41d2-9e61-f1664fb58578/4DNFI26F3SXL.fastq.gz", "paired_end": "1", "status": "released", "uuid": "be36f915-9ccc-41d2-9e61-f1664fb58578", "@id": "/files-fastq/4DNFI26F3SXL/", "dbxrefs": ["SRA:SRR5939224"], "display_title": "4DNFI26F3SXL.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/4221ddaf-e832-468a-ad8b-7ea671fa9bce/", "Sequence length": "50", "uuid": "4221ddaf-e832-468a-ad8b-7ea671fa9bce", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI26F3SXL/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "9d448cdc-6d0e-4338-934a-2af91ea76cff", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIOY8N3RG.fastq.gz", "accession": "4DNFIOY8N3RG", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFIOY8N3RG/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939224", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939224"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 187747713, "file_classification": "raw file", "href": "/files-fastq/4DNFIOY8N3RG/@@download/4DNFIOY8N3RG.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIOY8N3RG", "upload_key": "9d448cdc-6d0e-4338-934a-2af91ea76cff/4DNFIOY8N3RG.fastq.gz", "paired_end": "2", "status": "released", "uuid": "9d448cdc-6d0e-4338-934a-2af91ea76cff", "@id": "/files-fastq/4DNFIOY8N3RG/", "dbxrefs": ["SRA:SRR5939224"], "display_title": "4DNFIOY8N3RG.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/19af29b4-c3dc-4f10-be7f-e1f76f3cdc02/", "Sequence length": "50", "uuid": "19af29b4-c3dc-4f10-be7f-e1f76f3cdc02", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIOY8N3RG/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "be36f915-9ccc-41d2-9e61-f1664fb58578", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFI26F3SXL.fastq.gz", "accession": "4DNFI26F3SXL", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFI26F3SXL/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939224", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939224"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 207829091, "file_classification": "raw file", "href": "/files-fastq/4DNFIJM15U83/@@download/4DNFIJM15U83.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIJM15U83", "upload_key": "ad749959-4816-4a96-b4b5-1e4a3f25193e/4DNFIJM15U83.fastq.gz", "paired_end": "1", "status": "released", "uuid": "ad749959-4816-4a96-b4b5-1e4a3f25193e", "@id": "/files-fastq/4DNFIJM15U83/", "dbxrefs": ["SRA:SRR5939225"], "display_title": "4DNFIJM15U83.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/15124950-7d45-4559-8237-8587f7e8266f/", "Sequence length": "50", "uuid": "15124950-7d45-4559-8237-8587f7e8266f", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIJM15U83/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "d7c9611a-ebab-42a6-a937-f71ee2e1400d", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFI6E1KAHE.fastq.gz", "accession": "4DNFI6E1KAHE", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFI6E1KAHE/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939225", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939225"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 207693815, "file_classification": "raw file", "href": "/files-fastq/4DNFI6E1KAHE/@@download/4DNFI6E1KAHE.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFI6E1KAHE", "upload_key": "d7c9611a-ebab-42a6-a937-f71ee2e1400d/4DNFI6E1KAHE.fastq.gz", "paired_end": "2", "status": "released", "uuid": "d7c9611a-ebab-42a6-a937-f71ee2e1400d", "@id": "/files-fastq/4DNFI6E1KAHE/", "dbxrefs": ["SRA:SRR5939225"], "display_title": "4DNFI6E1KAHE.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/cfeb046b-2ba6-4b13-8098-96c3cb715d99/", "Sequence length": "50", "uuid": "cfeb046b-2ba6-4b13-8098-96c3cb715d99", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI6E1KAHE/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "ad749959-4816-4a96-b4b5-1e4a3f25193e", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIJM15U83.fastq.gz", "accession": "4DNFIJM15U83", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFIJM15U83/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939225", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939225"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 174436151, "file_classification": "raw file", "href": "/files-fastq/4DNFIPAW6DK1/@@download/4DNFIPAW6DK1.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIPAW6DK1", "upload_key": "96e46aa0-2e4a-431b-9d8c-94d1bed24537/4DNFIPAW6DK1.fastq.gz", "paired_end": "1", "status": "released", "uuid": "96e46aa0-2e4a-431b-9d8c-94d1bed24537", "@id": "/files-fastq/4DNFIPAW6DK1/", "dbxrefs": ["SRA:SRR5939226"], "display_title": "4DNFIPAW6DK1.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/3b39d504-1e29-4a9f-8eae-611f07dba493/", "Sequence length": "50", "uuid": "3b39d504-1e29-4a9f-8eae-611f07dba493", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIPAW6DK1/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "6c466a16-6eb6-4813-9dac-2af9bec989e7", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIZXW4J75.fastq.gz", "accession": "4DNFIZXW4J75", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFIZXW4J75/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939226", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939226"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 175765701, "file_classification": "raw file", "href": "/files-fastq/4DNFIZXW4J75/@@download/4DNFIZXW4J75.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIZXW4J75", "upload_key": "6c466a16-6eb6-4813-9dac-2af9bec989e7/4DNFIZXW4J75.fastq.gz", "paired_end": "2", "status": "released", "uuid": "6c466a16-6eb6-4813-9dac-2af9bec989e7", "@id": "/files-fastq/4DNFIZXW4J75/", "dbxrefs": ["SRA:SRR5939226"], "display_title": "4DNFIZXW4J75.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/7fb8ab86-bd58-4953-b9ae-b3ce5c3b50a1/", "Sequence length": "50", "uuid": "7fb8ab86-bd58-4953-b9ae-b3ce5c3b50a1", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIZXW4J75/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-14", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "96e46aa0-2e4a-431b-9d8c-94d1bed24537", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIPAW6DK1.fastq.gz", "accession": "4DNFIPAW6DK1", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFIPAW6DK1/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939226", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939226"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 196577363, "file_classification": "raw file", "href": "/files-fastq/4DNFIM9R5WK1/@@download/4DNFIM9R5WK1.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIM9R5WK1", "upload_key": "700fd6df-2c17-4f5b-b826-f0773cc8b24b/4DNFIM9R5WK1.fastq.gz", "paired_end": "1", "status": "released", "uuid": "700fd6df-2c17-4f5b-b826-f0773cc8b24b", "@id": "/files-fastq/4DNFIM9R5WK1/", "dbxrefs": ["SRA:SRR5939227"], "display_title": "4DNFIM9R5WK1.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/1bc96736-40a5-430d-85a8-4c8b8420580d/", "Sequence length": "50", "uuid": "1bc96736-40a5-430d-85a8-4c8b8420580d", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIM9R5WK1/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "26ce14ba-e5c4-47b3-b9a5-9521ccbaa9e7", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIEBHT4QK.fastq.gz", "accession": "4DNFIEBHT4QK", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFIEBHT4QK/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939227", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939227"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 178041676, "file_classification": "raw file", "href": "/files-fastq/4DNFIEBHT4QK/@@download/4DNFIEBHT4QK.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIEBHT4QK", "upload_key": "26ce14ba-e5c4-47b3-b9a5-9521ccbaa9e7/4DNFIEBHT4QK.fastq.gz", "paired_end": "2", "status": "released", "uuid": "26ce14ba-e5c4-47b3-b9a5-9521ccbaa9e7", "@id": "/files-fastq/4DNFIEBHT4QK/", "dbxrefs": ["SRA:SRR5939227"], "display_title": "4DNFIEBHT4QK.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/c890db6f-a188-4fb0-952d-db9deccfc9c6/", "Sequence length": "50", "uuid": "c890db6f-a188-4fb0-952d-db9deccfc9c6", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIEBHT4QK/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "700fd6df-2c17-4f5b-b826-f0773cc8b24b", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIM9R5WK1.fastq.gz", "accession": "4DNFIM9R5WK1", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFIM9R5WK1/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939227", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939227"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 178526461, "file_classification": "raw file", "href": "/files-fastq/4DNFI73NPE22/@@download/4DNFI73NPE22.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFI73NPE22", "upload_key": "5660cbb4-fe57-42d2-af42-436d6e4f3bcc/4DNFI73NPE22.fastq.gz", "paired_end": "1", "status": "released", "uuid": "5660cbb4-fe57-42d2-af42-436d6e4f3bcc", "@id": "/files-fastq/4DNFI73NPE22/", "dbxrefs": ["SRA:SRR5939228"], "display_title": "4DNFI73NPE22.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/1fb94cb3-f4f4-4e2d-80f8-8ccf8073fa5c/", "Sequence length": "50", "uuid": "1fb94cb3-f4f4-4e2d-80f8-8ccf8073fa5c", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI73NPE22/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-14", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "7c5ad414-5b72-4abd-a6b1-87e5a8e77bba", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFI4J6ANSB.fastq.gz", "accession": "4DNFI4J6ANSB", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFI4J6ANSB/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939228", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939228"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 178723626, "file_classification": "raw file", "href": "/files-fastq/4DNFI4J6ANSB/@@download/4DNFI4J6ANSB.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFI4J6ANSB", "upload_key": "7c5ad414-5b72-4abd-a6b1-87e5a8e77bba/4DNFI4J6ANSB.fastq.gz", "paired_end": "2", "status": "released", "uuid": "7c5ad414-5b72-4abd-a6b1-87e5a8e77bba", "@id": "/files-fastq/4DNFI4J6ANSB/", "dbxrefs": ["SRA:SRR5939228"], "display_title": "4DNFI4J6ANSB.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/907192e4-292c-4441-a2ea-5f971da2d9de/", "Sequence length": "50", "uuid": "907192e4-292c-4441-a2ea-5f971da2d9de", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI4J6ANSB/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "5660cbb4-fe57-42d2-af42-436d6e4f3bcc", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFI73NPE22.fastq.gz", "accession": "4DNFI73NPE22", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFI73NPE22/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939228", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939228"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 183734041, "file_classification": "raw file", "href": "/files-fastq/4DNFIL2DRYDI/@@download/4DNFIL2DRYDI.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIL2DRYDI", "upload_key": "b6fb1ff4-46e0-4299-861e-58a6357038ee/4DNFIL2DRYDI.fastq.gz", "paired_end": "1", "status": "released", "uuid": "b6fb1ff4-46e0-4299-861e-58a6357038ee", "@id": "/files-fastq/4DNFIL2DRYDI/", "dbxrefs": ["SRA:SRR5939229"], "display_title": "4DNFIL2DRYDI.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/7c283bf5-c461-41a2-958d-7e6a26107b35/", "Sequence length": "50", "uuid": "7c283bf5-c461-41a2-958d-7e6a26107b35", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIL2DRYDI/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-14", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "3666d786-4a00-4e71-bef8-c3008f18178c", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIMIF2C3S.fastq.gz", "accession": "4DNFIMIF2C3S", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFIMIF2C3S/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939229", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939229"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 204376062, "file_classification": "raw file", "href": "/files-fastq/4DNFIMIF2C3S/@@download/4DNFIMIF2C3S.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIMIF2C3S", "upload_key": "3666d786-4a00-4e71-bef8-c3008f18178c/4DNFIMIF2C3S.fastq.gz", "paired_end": "2", "status": "released", "uuid": "3666d786-4a00-4e71-bef8-c3008f18178c", "@id": "/files-fastq/4DNFIMIF2C3S/", "dbxrefs": ["SRA:SRR5939229"], "display_title": "4DNFIMIF2C3S.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/d8356954-f7e3-446a-b365-afe77fb13be0/", "Sequence length": "50", "uuid": "d8356954-f7e3-446a-b365-afe77fb13be0", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIMIF2C3S/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "b6fb1ff4-46e0-4299-861e-58a6357038ee", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIL2DRYDI.fastq.gz", "accession": "4DNFIL2DRYDI", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFIL2DRYDI/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939229", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939229"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 199721177, "file_classification": "raw file", "href": "/files-fastq/4DNFIRYQPNAM/@@download/4DNFIRYQPNAM.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIRYQPNAM", "upload_key": "19ab6d39-e8af-4c25-8a25-89d38a8caaa2/4DNFIRYQPNAM.fastq.gz", "paired_end": "1", "status": "released", "uuid": "19ab6d39-e8af-4c25-8a25-89d38a8caaa2", "@id": "/files-fastq/4DNFIRYQPNAM/", "dbxrefs": ["SRA:SRR5939230"], "display_title": "4DNFIRYQPNAM.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/d1dac05e-a8a7-4524-b127-084722e9b054/", "Sequence length": "50", "uuid": "d1dac05e-a8a7-4524-b127-084722e9b054", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIRYQPNAM/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-14", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "2b0537e1-400b-4b7f-ab12-9048d470b7ce", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFID7DO58Z.fastq.gz", "accession": "4DNFID7DO58Z", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFID7DO58Z/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939230", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939230"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 180669527, "file_classification": "raw file", "href": "/files-fastq/4DNFID7DO58Z/@@download/4DNFID7DO58Z.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFID7DO58Z", "upload_key": "2b0537e1-400b-4b7f-ab12-9048d470b7ce/4DNFID7DO58Z.fastq.gz", "paired_end": "2", "status": "released", "uuid": "2b0537e1-400b-4b7f-ab12-9048d470b7ce", "@id": "/files-fastq/4DNFID7DO58Z/", "dbxrefs": ["SRA:SRR5939230"], "display_title": "4DNFID7DO58Z.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/c41de64c-a0a2-48eb-afff-ec845bad3944/", "Sequence length": "50", "uuid": "c41de64c-a0a2-48eb-afff-ec845bad3944", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFID7DO58Z/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "19ab6d39-e8af-4c25-8a25-89d38a8caaa2", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIRYQPNAM.fastq.gz", "accession": "4DNFIRYQPNAM", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFIRYQPNAM/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939230", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939230"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 183491832, "file_classification": "raw file", "href": "/files-fastq/4DNFIVIDSF1R/@@download/4DNFIVIDSF1R.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIVIDSF1R", "upload_key": "126e6b77-ffb1-4b0a-89e2-e7855511da91/4DNFIVIDSF1R.fastq.gz", "paired_end": "1", "status": "released", "uuid": "126e6b77-ffb1-4b0a-89e2-e7855511da91", "@id": "/files-fastq/4DNFIVIDSF1R/", "dbxrefs": ["SRA:SRR5939231"], "display_title": "4DNFIVIDSF1R.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/2db9667f-dedc-4121-9b6b-a4acf9dbf5e2/", "Sequence length": "50", "uuid": "2db9667f-dedc-4121-9b6b-a4acf9dbf5e2", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIVIDSF1R/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "acb46139-a116-403e-9759-a06df46759ad", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFILVOJDVU.fastq.gz", "accession": "4DNFILVOJDVU", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFILVOJDVU/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939231", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939231"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 184559745, "file_classification": "raw file", "href": "/files-fastq/4DNFILVOJDVU/@@download/4DNFILVOJDVU.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFILVOJDVU", "upload_key": "acb46139-a116-403e-9759-a06df46759ad/4DNFILVOJDVU.fastq.gz", "paired_end": "2", "status": "released", "uuid": "acb46139-a116-403e-9759-a06df46759ad", "@id": "/files-fastq/4DNFILVOJDVU/", "dbxrefs": ["SRA:SRR5939231"], "display_title": "4DNFILVOJDVU.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/f531ab2c-3d86-447e-932f-5ce93667607c/", "Sequence length": "50", "uuid": "f531ab2c-3d86-447e-932f-5ce93667607c", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFILVOJDVU/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "126e6b77-ffb1-4b0a-89e2-e7855511da91", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIVIDSF1R.fastq.gz", "accession": "4DNFIVIDSF1R", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFIVIDSF1R/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939231", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939231"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 186115979, "file_classification": "raw file", "href": "/files-fastq/4DNFIDI3MFHQ/@@download/4DNFIDI3MFHQ.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIDI3MFHQ", "upload_key": "740afc87-7262-42d9-a050-41879c892a16/4DNFIDI3MFHQ.fastq.gz", "paired_end": "1", "status": "released", "uuid": "740afc87-7262-42d9-a050-41879c892a16", "@id": "/files-fastq/4DNFIDI3MFHQ/", "dbxrefs": ["SRA:SRR5939232"], "display_title": "4DNFIDI3MFHQ.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/fb09bde0-3343-4517-92e4-fc183fae6f05/", "Sequence length": "50", "uuid": "fb09bde0-3343-4517-92e4-fc183fae6f05", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIDI3MFHQ/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "eab438d9-8934-479c-8a5a-6706eadbc8a1", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIMZRXWY4.fastq.gz", "accession": "4DNFIMZRXWY4", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFIMZRXWY4/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939232", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939232"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 187206074, "file_classification": "raw file", "href": "/files-fastq/4DNFIMZRXWY4/@@download/4DNFIMZRXWY4.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIMZRXWY4", "upload_key": "eab438d9-8934-479c-8a5a-6706eadbc8a1/4DNFIMZRXWY4.fastq.gz", "paired_end": "2", "status": "released", "uuid": "eab438d9-8934-479c-8a5a-6706eadbc8a1", "@id": "/files-fastq/4DNFIMZRXWY4/", "dbxrefs": ["SRA:SRR5939232"], "display_title": "4DNFIMZRXWY4.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/edadd105-ed05-4651-8c26-e85e93c6526f/", "Sequence length": "50", "uuid": "edadd105-ed05-4651-8c26-e85e93c6526f", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIMZRXWY4/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-14", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "740afc87-7262-42d9-a050-41879c892a16", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIDI3MFHQ.fastq.gz", "accession": "4DNFIDI3MFHQ", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFIDI3MFHQ/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939232", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939232"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 176665539, "file_classification": "raw file", "href": "/files-fastq/4DNFI8PQAZ6F/@@download/4DNFI8PQAZ6F.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFI8PQAZ6F", "upload_key": "b78ed65d-82da-4244-904b-0c7789a0afab/4DNFI8PQAZ6F.fastq.gz", "paired_end": "1", "status": "released", "uuid": "b78ed65d-82da-4244-904b-0c7789a0afab", "@id": "/files-fastq/4DNFI8PQAZ6F/", "dbxrefs": ["SRA:SRR5939233"], "display_title": "4DNFI8PQAZ6F.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/d5944f54-e8bc-4a87-925a-9f5190271a90/", "Sequence length": "50", "uuid": "d5944f54-e8bc-4a87-925a-9f5190271a90", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI8PQAZ6F/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 3367206, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "b8b9ddc7-3560-492d-a42a-0b348866d42e", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIL64D4ND.fastq.gz", "accession": "4DNFIL64D4ND", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFIL64D4ND/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939233", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939233"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 161717983, "file_classification": "raw file", "href": "/files-fastq/4DNFIL64D4ND/@@download/4DNFIL64D4ND.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIL64D4ND", "upload_key": "b8b9ddc7-3560-492d-a42a-0b348866d42e/4DNFIL64D4ND.fastq.gz", "paired_end": "2", "status": "released", "uuid": "b8b9ddc7-3560-492d-a42a-0b348866d42e", "@id": "/files-fastq/4DNFIL64D4ND/", "dbxrefs": ["SRA:SRR5939233"], "display_title": "4DNFIL64D4ND.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/328f719b-81f9-46d5-a9f8-e9a25be8b262/", "Sequence length": "50", "uuid": "328f719b-81f9-46d5-a9f8-e9a25be8b262", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIL64D4ND/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 3367206, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "b78ed65d-82da-4244-904b-0c7789a0afab", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFI8PQAZ6F.fastq.gz", "accession": "4DNFI8PQAZ6F", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFI8PQAZ6F/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939233", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939233"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 186437821, "file_classification": "raw file", "href": "/files-fastq/4DNFIUPZZQJL/@@download/4DNFIUPZZQJL.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIUPZZQJL", "upload_key": "5129ce7f-b557-4d95-8eff-9cb1678996ce/4DNFIUPZZQJL.fastq.gz", "paired_end": "1", "status": "released", "uuid": "5129ce7f-b557-4d95-8eff-9cb1678996ce", "@id": "/files-fastq/4DNFIUPZZQJL/", "dbxrefs": ["SRA:SRR5939234"], "display_title": "4DNFIUPZZQJL.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/4c47cc44-698d-4200-85d5-b484dcb90316/", "Sequence length": "50", "uuid": "4c47cc44-698d-4200-85d5-b484dcb90316", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIUPZZQJL/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "612d53cd-d484-4fb6-ab65-c5fff69429dc", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIFKXLT7Q.fastq.gz", "accession": "4DNFIFKXLT7Q", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFIFKXLT7Q/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939234", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939234"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 187821257, "file_classification": "raw file", "href": "/files-fastq/4DNFIFKXLT7Q/@@download/4DNFIFKXLT7Q.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIFKXLT7Q", "upload_key": "612d53cd-d484-4fb6-ab65-c5fff69429dc/4DNFIFKXLT7Q.fastq.gz", "paired_end": "2", "status": "released", "uuid": "612d53cd-d484-4fb6-ab65-c5fff69429dc", "@id": "/files-fastq/4DNFIFKXLT7Q/", "dbxrefs": ["SRA:SRR5939234"], "display_title": "4DNFIFKXLT7Q.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/442502d6-c414-428d-a5ba-77c10ce5da72/", "Sequence length": "50", "uuid": "442502d6-c414-428d-a5ba-77c10ce5da72", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIFKXLT7Q/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-14", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "5129ce7f-b557-4d95-8eff-9cb1678996ce", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIUPZZQJL.fastq.gz", "accession": "4DNFIUPZZQJL", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFIUPZZQJL/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939234", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939234"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 188189659, "file_classification": "raw file", "href": "/files-fastq/4DNFILWSJTQV/@@download/4DNFILWSJTQV.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFILWSJTQV", "upload_key": "45672f20-c4e8-4b5f-ab84-b8bc294ae2ba/4DNFILWSJTQV.fastq.gz", "paired_end": "1", "status": "released", "uuid": "45672f20-c4e8-4b5f-ab84-b8bc294ae2ba", "@id": "/files-fastq/4DNFILWSJTQV/", "dbxrefs": ["SRA:SRR5939235"], "display_title": "4DNFILWSJTQV.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/00f67446-f4d2-4a8a-b6ab-5f60aa4f2e3f/", "Sequence length": "50", "uuid": "00f67446-f4d2-4a8a-b6ab-5f60aa4f2e3f", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFILWSJTQV/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "f40faec5-133b-4c11-9b6e-e3f4106a2e11", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIA61D116.fastq.gz", "accession": "4DNFIA61D116", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFIA61D116/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939235", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939235"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 189540161, "file_classification": "raw file", "href": "/files-fastq/4DNFIA61D116/@@download/4DNFIA61D116.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIA61D116", "upload_key": "f40faec5-133b-4c11-9b6e-e3f4106a2e11/4DNFIA61D116.fastq.gz", "paired_end": "2", "status": "released", "uuid": "f40faec5-133b-4c11-9b6e-e3f4106a2e11", "@id": "/files-fastq/4DNFIA61D116/", "dbxrefs": ["SRA:SRR5939235"], "display_title": "4DNFIA61D116.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/ecfe82bf-e658-45da-ace4-540e6252c117/", "Sequence length": "50", "uuid": "ecfe82bf-e658-45da-ace4-540e6252c117", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIA61D116/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "45672f20-c4e8-4b5f-ab84-b8bc294ae2ba", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFILWSJTQV.fastq.gz", "accession": "4DNFILWSJTQV", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFILWSJTQV/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939235", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939235"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 190293964, "file_classification": "raw file", "href": "/files-fastq/4DNFIMTFE4WX/@@download/4DNFIMTFE4WX.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIMTFE4WX", "upload_key": "5d59885c-6127-47eb-9a18-c369dfd70c3e/4DNFIMTFE4WX.fastq.gz", "paired_end": "1", "status": "released", "uuid": "5d59885c-6127-47eb-9a18-c369dfd70c3e", "@id": "/files-fastq/4DNFIMTFE4WX/", "dbxrefs": ["SRA:SRR5939236"], "display_title": "4DNFIMTFE4WX.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/922b6bbb-48b1-44f4-96b0-fb591f69153a/", "Sequence length": "50", "uuid": "922b6bbb-48b1-44f4-96b0-fb591f69153a", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIMTFE4WX/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "d97f0728-802b-4220-8ff4-48efdf4d5523", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIEWSAKY8.fastq.gz", "accession": "4DNFIEWSAKY8", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFIEWSAKY8/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939236", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939236"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 192270796, "file_classification": "raw file", "href": "/files-fastq/4DNFIEWSAKY8/@@download/4DNFIEWSAKY8.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIEWSAKY8", "upload_key": "d97f0728-802b-4220-8ff4-48efdf4d5523/4DNFIEWSAKY8.fastq.gz", "paired_end": "2", "status": "released", "uuid": "d97f0728-802b-4220-8ff4-48efdf4d5523", "@id": "/files-fastq/4DNFIEWSAKY8/", "dbxrefs": ["SRA:SRR5939236"], "display_title": "4DNFIEWSAKY8.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/aff45862-6430-4bac-889a-b0ae8332087d/", "Sequence length": "50", "uuid": "aff45862-6430-4bac-889a-b0ae8332087d", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIEWSAKY8/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "5d59885c-6127-47eb-9a18-c369dfd70c3e", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIMTFE4WX.fastq.gz", "accession": "4DNFIMTFE4WX", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFIMTFE4WX/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939236", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939236"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 180739995, "file_classification": "raw file", "href": "/files-fastq/4DNFINWHHCVI/@@download/4DNFINWHHCVI.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFINWHHCVI", "upload_key": "5dd32231-900a-4a5b-8fa1-6e9a8a9b5420/4DNFINWHHCVI.fastq.gz", "paired_end": "1", "status": "released", "uuid": "5dd32231-900a-4a5b-8fa1-6e9a8a9b5420", "@id": "/files-fastq/4DNFINWHHCVI/", "dbxrefs": ["SRA:SRR5939237"], "display_title": "4DNFINWHHCVI.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/d314dc23-998a-4049-90c2-fc60d5ec0c2b/", "Sequence length": "50", "uuid": "d314dc23-998a-4049-90c2-fc60d5ec0c2b", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFINWHHCVI/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "49b02f78-7bdf-4058-8a0f-2907c9fd097f", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFILNLD3W4.fastq.gz", "accession": "4DNFILNLD3W4", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFILNLD3W4/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939237", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939237"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 181533636, "file_classification": "raw file", "href": "/files-fastq/4DNFILNLD3W4/@@download/4DNFILNLD3W4.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFILNLD3W4", "upload_key": "49b02f78-7bdf-4058-8a0f-2907c9fd097f/4DNFILNLD3W4.fastq.gz", "paired_end": "2", "status": "released", "uuid": "49b02f78-7bdf-4058-8a0f-2907c9fd097f", "@id": "/files-fastq/4DNFILNLD3W4/", "dbxrefs": ["SRA:SRR5939237"], "display_title": "4DNFILNLD3W4.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/99938a80-30e8-4844-bb63-b8aff233d777/", "Sequence length": "50", "uuid": "99938a80-30e8-4844-bb63-b8aff233d777", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFILNLD3W4/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "5dd32231-900a-4a5b-8fa1-6e9a8a9b5420", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFINWHHCVI.fastq.gz", "accession": "4DNFINWHHCVI", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFINWHHCVI/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939237", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939237"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 181385534, "file_classification": "raw file", "href": "/files-fastq/4DNFI1MT3OUA/@@download/4DNFI1MT3OUA.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFI1MT3OUA", "upload_key": "705fae8a-c51e-4291-a450-87c9e5fb88ef/4DNFI1MT3OUA.fastq.gz", "paired_end": "1", "status": "released", "uuid": "705fae8a-c51e-4291-a450-87c9e5fb88ef", "@id": "/files-fastq/4DNFI1MT3OUA/", "dbxrefs": ["SRA:SRR5939238"], "display_title": "4DNFI1MT3OUA.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/57cb7775-ac75-49f9-9aa8-ba0c983e9115/", "Sequence length": "50", "uuid": "57cb7775-ac75-49f9-9aa8-ba0c983e9115", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI1MT3OUA/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "3f164db1-50d6-4c92-95df-2ddae0e93028", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFIRHJL8AG.fastq.gz", "accession": "4DNFIRHJL8AG", "file_type": "reads", "paired_end": "2", "status": "released", "@id": "/files-fastq/4DNFIRHJL8AG/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939238", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939238"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"@type": ["FileFastq", "File", "Item"], "file_type": "reads", "file_size": 182464659, "file_classification": "raw file", "href": "/files-fastq/4DNFIRHJL8AG/@@download/4DNFIRHJL8AG.fastq.gz", "file_type_detailed": "reads (fastq)", "accession": "4DNFIRHJL8AG", "upload_key": "3f164db1-50d6-4c92-95df-2ddae0e93028/4DNFIRHJL8AG.fastq.gz", "paired_end": "2", "status": "released", "uuid": "3f164db1-50d6-4c92-95df-2ddae0e93028", "@id": "/files-fastq/4DNFIRHJL8AG/", "dbxrefs": ["SRA:SRR5939238"], "display_title": "4DNFIRHJL8AG.fastq.gz", "quality_metric": {"@id": "/quality-metrics-fastqc/fd584d4f-344b-44f6-a5a4-400065c50da0/", "Sequence length": "50", "uuid": "fd584d4f-344b-44f6-a5a4-400065c50da0", "overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIRHJL8AG/fastqc_report.html", "status": "released", "display_title": "QualityMetricFastqc from 2018-11-19", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "Total Sequences": 4000000, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"uuid": "705fae8a-c51e-4291-a450-87c9e5fb88ef", "@type": ["FileFastq", "File", "Item"], "file_type_detailed": "reads (fastq)", "display_title": "4DNFI1MT3OUA.fastq.gz", "accession": "4DNFI1MT3OUA", "file_type": "reads", "paired_end": "1", "status": "released", "@id": "/files-fastq/4DNFI1MT3OUA/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "@type": ["FileFormat", "Item"], "display_title": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5939238", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5939238"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "status": "released", "aliases": ["4dn-dcic-lab:GSM2745858"], "dbxrefs": ["GEO:GSM2745858"], "protocol": {"@id": "/protocols/e89ce7e7-92ba-4af4-b910-74b269c0e845/", "@type": ["Protocol", "Item"], "uuid": "e89ce7e7-92ba-4af4-b910-74b269c0e845", "display_title": "GSE102740_hic_protocol.pdf", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "accession": "4DNEXZ1XWPPX", "biosample": {"display_title": "4DNBSALC85HG", "modifications_summary": "None", "biosource_summary": "DT40 with random integration of X. laevis Cdk1, CDK1 disruption", "biosample_type": "immortalized cells", "uuid": "71a2ad79-7ecc-41df-9191-bd73ec32caa9", "status": "released", "treatments_summary": "1NM-PP1 treatment (2.0 \u03bcM, 10.0h) and nocodazole treatment (0.5 \u03bcg/mL)", "accession": "4DNBSALC85HG", "@id": "/biosamples/4DNBSALC85HG/", "@type": ["Biosample", "Item"], "biosource": [{"lab": {"status": "current", "uuid": "3c577664-affb-41c4-bf27-9e21c2fc1554", "display_title": "Job Dekker, UMMS", "@type": ["Lab", "Item"], "@id": "/labs/job-dekker-lab/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin", "role.lab_submitter", "submits_for.3c577664-affb-41c4-bf27-9e21c2fc1554"]}}, "award": {"display_title": "EXTERNAL AWARD", "status": "current", "@id": "/awards/external-award/", "uuid": "12a92962-8265-4fc0-b2f8-cf14f05db58b", "@type": ["Award", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "status": "released", "tissue": {"@id": "/ontology-terms/UBERON:0003903/", "preferred_name": "bursa of Fabricius", "term_name": "bursa of Fabricius", "slim_terms": [{"status": "released", "uuid": "111129bc-8535-4448-903e-854af460a233", "display_title": "digestive system", "@type": ["OntologyTerm", "Item"], "@id": "/ontology-terms/UBERON:0001007/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"status": "released", "uuid": "111120bc-8535-4448-903e-854af460a233", "display_title": "mesoderm", "@type": ["OntologyTerm", "Item"], "@id": "/ontology-terms/UBERON:0000926/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "display_title": "bursa of Fabricius", "uuid": "1bfd1088-3311-4711-8c41-83dbed3db972", "status": "released", "@type": ["OntologyTerm", "Item"], "term_id": "UBERON:0003903", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "aliases": ["4dn-dcic-lab:DT40-Cdk1as"], "accession": "4DNSRFB455CY", "cell_line": {"status": "released", "slim_terms": [{"status": "current", "uuid": "72e16a19-eef3-46ca-a1b8-20e646e69675", "@type": ["OntologyTerm", "Item"], "display_title": "cell", "@id": "/ontology-terms/GO:0005623/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"status": "released", "uuid": "45d2b02e-130b-40db-8bf2-2288c6c57dcf", "@type": ["OntologyTerm", "Item"], "display_title": "cell", "@id": "/ontology-terms/CL:0000000/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "display_title": "DT40", "@type": ["OntologyTerm", "Item"], "term_name": "DT40", "preferred_name": "DT40", "@id": "/ontology-terms/EFO:0006274/", "uuid": "fd057734-0765-4007-b7eb-d71ac7cbef65", "term_id": "EFO:0006274", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "individual": {"display_title": "4DNINYWTTO3D", "uuid": "836856fd-a0f7-4daf-afb2-4a098df8e8fc", "@id": "/individuals-chicken/4DNINYWTTO3D/", "status": "released", "@type": ["IndividualChicken", "Individual", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "description": "DT40 line expressing Cdk1as transgene, which renders it sensitive to inhibition by 1NM-PP1", "date_created": "2018-10-30T15:04:12.407677+00:00", "submitted_by": {"error": "no view permissions"}, "last_modified": {"modified_by": {"error": "no view permissions"}, "date_modified": "2019-10-11T22:24:13.955875+00:00"}, "modifications": [{"status": "released", "uuid": "4dca1ddb-ab74-44f5-ac84-738b0198886d", "@id": "/modifications/4dca1ddb-ab74-44f5-ac84-738b0198886d/", "@type": ["Modification", "Item"], "display_title": "random integration of X. laevis Cdk1", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"status": "released", "uuid": "fb27fdf6-4199-4179-8bb0-6101b1404aee", "@id": "/modifications/fb27fdf6-4199-4179-8bb0-6101b1404aee/", "@type": ["Modification", "Item"], "display_title": "Crispr disruption for CDK1 chicken gene", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "biosource_type": "immortalized cell line", "cell_line_tier": "Unclassified", "public_release": "2019-10-11", "schema_version": "2", "project_release": "2019-10-11", "@id": "/biosources/4DNSRFB455CY/", "@type": ["Biosource", "Item"], "uuid": "bdb9d92e-1f52-4e84-a484-78e595791e5e", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "display_title": "DT40 with random integration of X. laevis Cdk1, CDK1 disruption - 4DNSRFB455CY", "external_references": [], "biosource_name": "DT40 with random integration of X. laevis Cdk1, CDK1 disruption", "biosource_category": ["Other"], "organism": {"@type": ["Organism", "Item"], "status": "released", "uuid": "fed8c206-762f-497f-821b-1c8ff7900bd2", "@id": "/organisms/9031/", "name": "chicken", "display_title": "G. gallus", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "treatments": [{"display_title": "1NM-PP1 treatment (2.0 \u03bcM, 10.0h)", "chemical": "1NM-PP1", "concentration_units": "\u03bcM", "@id": "/treatments-agent/6600f226-5817-4bb8-afb5-c412a7b39058/", "@type": ["TreatmentAgent", "Treatment", "Item"], "duration_units": "hour", "concentration": 2.0, "duration": 10.0, "treatment_type": "Chemical", "status": "released", "uuid": "6600f226-5817-4bb8-afb5-c412a7b39058", "description": "Synchronization with 1NM-PP1 fo 10 hours", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"display_title": "nocodazole treatment (0.5 \u03bcg/mL)", "chemical": "nocodazole", "concentration_units": "\u03bcg/mL", "@id": "/treatments-agent/cfce7629-46e6-4edd-8496-bd727b51e98f/", "@type": ["TreatmentAgent", "Treatment", "Item"], "concentration": 0.5, "treatment_type": "Chemical", "status": "released", "uuid": "cfce7629-46e6-4edd-8496-bd727b51e98f", "description": "Nocodazole treatment for prometaphase block", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "badges": [{"messages": ["Biosample missing Cell Culture Details"], "badge": {"title": "Biosample Metadata Incomplete", "@id": "/badges/biosample-metadata-incomplete/", "description": "Biosample is missing metadata information required as part of the standards implemented by the 4DN Samples working group.", "badge_icon": "/static/img/badges/biosample-icon.svg", "status": "released", "badge_classification": "Warning", "warning": "Biosample Metadata Incomplete", "display_title": "Biosample Metadata Incomplete", "uuid": "2b2cc7ff-b7a8-4138-9a6c-22884fc71690", "@type": ["Badge", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "description": "20150603-s30m-R1", "sop_mapping": {"has_sop": "No"}, "date_created": "2018-10-30T15:05:19.206667+00:00", "submitted_by": {"error": "no view permissions"}, "last_modified": {"modified_by": {"error": "no view permissions"}, "date_modified": "2019-10-11T20:54:52.669547+00:00"}, "ligation_time": 240.0, "biotin_removed": "Yes", "digestion_time": 960.0, "public_release": "2019-10-11", "schema_version": "2", "tagging_method": "biotin-dCTP", "experiment_type": {"@id": "/experiment-types/dilution-hi-c/", "@type": ["ExperimentType", "Item"], "title": "Dilution Hi-C", "uuid": "832b7989-69ab-4bb6-97b9-195d5dd965ea", "experiment_category": "Sequencing", "display_title": "Dilution Hi-C", "status": "released", "assay_subclass_short": "Hi-C", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "processed_files": [{"file_type": "alignments", "accession": "4DNFIPKHJGHX", "@type": ["FileProcessed", "File", "Item"], "upload_key": "3f7c5580-3d1e-4e2f-9e01-d154686b51a7/4DNFIPKHJGHX.bam", "file_type_detailed": "alignments (bam)", "uuid": "3f7c5580-3d1e-4e2f-9e01-d154686b51a7", "display_title": "4DNFIPKHJGHX.bam", "href": "/files-processed/4DNFIPKHJGHX/@@download/4DNFIPKHJGHX.bam", "open_data_url": "https://4dn-open-data-public.s3.amazonaws.com/fourfront-webprod/wfoutput/3f7c5580-3d1e-4e2f-9e01-d154686b51a7/4DNFIPKHJGHX.bam", "file_classification": "processed file", "status": "released", "file_size": 17681402276, "@id": "/files-processed/4DNFIPKHJGHX/", "file_format": {"file_format": "bam", "@type": ["FileFormat", "Item"], "display_title": "bam", "@id": "/file-formats/bam/", "status": "released", "uuid": "d13d06cf-218e-4f61-aaf0-91f226248b3c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"overall_quality_status": "PASS", "@id": "/quality-metrics-bamqc/df08410a-f1c4-4a17-9d33-bf2ae4267209/", "status": "released", "uuid": "df08410a-f1c4-4a17-9d33-bf2ae4267209", "display_title": "QualityMetricBamqc from 2020-01-16", "@type": ["QualityMetricBamqc", "QualityMetric", "Item"], "quality_metric_summary": [{"title": "Total Reads", "value": "171367206", "numberType": "integer"}, {"title": "Unmapped Reads", "value": "17.06", "tooltip": "Percent of total reads (=29.24m)", "numberType": "percent"}, {"title": "Multimapped Reads", "value": "9.638", "tooltip": "Percent of total reads (=16.52m)", "numberType": "percent"}, {"title": "Duplicate Reads", "value": "32.542", "tooltip": "Percent of total reads (=55.77m)", "numberType": "percent"}, {"title": "Walks", "value": "0.002", "tooltip": "Percent of total reads (=0.0m)", "numberType": "percent"}, {"title": "Minor Contigs", "value": "0.261", "tooltip": "Percent of total reads (=0.45m)", "numberType": "percent"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "track_and_facet_info": {"experimental_lab": "Job Dekker, UMMS", "experiment_type": "Dilution Hi-C", "experiment_bucket": "processed file", "assay_info": "HindIII", "dataset": "HiC on sorted sync. chicken cells", "condition": "prometaphase block (30m)", "replicate_info": "Biorep 1, Techrep 1", "biosource_name": "DT40 with random integration of X. laevis Cdk1, CDK1 disruption", "lab_name": "4DN DCIC, HMS"}, "external_references": []}, {"file_type": "contact list-replicate", "accession": "4DNFIPGEFYVN", "@type": ["FileProcessed", "File", "Item"], "upload_key": "706dcb6c-90d4-4f59-934c-39f47766df8c/4DNFIPGEFYVN.pairs.gz", "file_type_detailed": "contact list-replicate (pairs)", "uuid": "706dcb6c-90d4-4f59-934c-39f47766df8c", "display_title": "4DNFIPGEFYVN.pairs.gz", "href": "/files-processed/4DNFIPGEFYVN/@@download/4DNFIPGEFYVN.pairs.gz", "open_data_url": "https://4dn-open-data-public.s3.amazonaws.com/fourfront-webprod/wfoutput/706dcb6c-90d4-4f59-934c-39f47766df8c/4DNFIPGEFYVN.pairs.gz", "file_classification": "processed file", "status": "released", "file_size": 1291974318, "@id": "/files-processed/4DNFIPGEFYVN/", "file_format": {"file_format": "pairs", "@type": ["FileFormat", "Item"], "display_title": "pairs", "@id": "/file-formats/pairs/", "status": "released", "uuid": "d13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "quality_metric": {"overall_quality_status": "PASS", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIPGEFYVN/pairsqc_report.html", "@id": "/quality-metrics-pairsqc/eb53b331-fa8f-4fa8-af90-fa398e5cc15e/", "Total reads": 69844784, "status": "released", "uuid": "eb53b331-fa8f-4fa8-af90-fa398e5cc15e", "display_title": "QualityMetricPairsqc from 2019-02-11", "@type": ["QualityMetricPairsqc", "QualityMetric", "Item"], "quality_metric_summary": [{"title": "Filtered Reads", "value": "69844784", "numberType": "integer"}, {"title": "Cis reads (>20kb)", "value": "17.347", "tooltip": "Percent of filtered reads (=12.12m)", "numberType": "percent"}, {"title": "Short cis reads", "value": "37.475", "tooltip": "Percent of filtered reads (=26.17m)", "numberType": "percent"}, {"title": "Trans Reads", "value": "45.178", "tooltip": "Percent of filtered reads (=31.55m)", "numberType": "percent"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "track_and_facet_info": {"experimental_lab": "Job Dekker, UMMS", "experiment_type": "Dilution Hi-C", "experiment_bucket": "processed file", "assay_info": "HindIII", "dataset": "HiC on sorted sync. chicken cells", "condition": "prometaphase block (30m)", "replicate_info": "Biorep 1, Techrep 1", "biosource_name": "DT40 with random integration of X. laevis Cdk1, CDK1 disruption", "lab_name": "4DN DCIC, HMS"}, "external_references": []}], "project_release": "2019-10-11", "digestion_enzyme": {"@type": ["Enzyme", "Item"], "display_title": "HindIII", "status": "released", "name": "HindIII", "uuid": "2ace2f00-c913-4bac-a6ef-0b316bc2108e", "@id": "/enzymes/HindIII/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "crosslinking_time": 10.0, "biosample_quantity": 6000000.0, "crosslinking_method": "1% Formaldehyde", "fragment_size_range": "150-350", "fragmentation_method": "sonication", "ligation_temperature": 16.0, "digestion_temperature": 37.0, "biosample_quantity_units": "cells", "crosslinking_temperature": 23.0, "library_preparation_date": "2015-06-03", "fragment_size_selection_method": "SPRI beads", "@id": "/experiments-hi-c/4DNEXZ1XWPPX/", "@type": ["ExperimentHiC", "Experiment", "Item"], "uuid": "9cdfa023-16ba-4687-afa4-3ace835e5287", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "display_title": "Dilution Hi-C on DT40 with random integration of X. laevis Cdk1, CDK1 disruption with HindIII - 4DNEXZ1XWPPX", "external_references": [{"ref": "GEO:GSM2745858", "uri": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM2745858"}], "experiment_sets": [{"accession": "4DNESXDOBP9L", "experimentset_type": "replicate", "display_title": "4DNESXDOBP9L", "@type": ["ExperimentSetReplicate", "ExperimentSet", "Item"], "@id": "/experiment-set-replicates/4DNESXDOBP9L/", "uuid": "c00aa095-4d00-4936-9936-29dabd5d6655", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "produced_in_pub": {"authors": ["Gibcus JH", "Samejima K", "Goloborodko A", "Samejima I", "Naumova N", "Nuebler J", "Kanemaki MT", "Xie L", "Paulson JR", "Earnshaw WC", "Mirny LA", "Dekker J"], "@id": "/publications/84fa5633-aac7-4cb3-b53b-0f0234ea06dd/", "title": "A pathway for mitotic chromosome formation.", "ID": "PMID:29348367", "short_attribution": "Gibcus JH et al. (2018)", "uuid": "84fa5633-aac7-4cb3-b53b-0f0234ea06dd", "abstract": "Mitotic chromosomes fold as compact arrays of chromatin loops. To identify the pathway of mitotic chromosome formation, we combined imaging and Hi-C analysis of synchronous DT40 cell cultures with polymer simulations. Here we show that in prophase, the interphase organization is rapidly lost in a condensin-dependent manner, and arrays of consecutive 60-kilobase (kb) loops are formed. During prometaphase, ~80-kb inner loops are nested within ~400-kb outer loops. The loop  array acquires a helical arrangement with consecutive loops emanating from a central \"spiral staircase\" condensin scaffold. The size of helical turns progressively increases to ~12 megabases during prometaphase. Acute depletion of  condensin I or II shows that nested loops form by differential action of the two  condensins, whereas condensin II is required for helical winding.", "display_title": "Gibcus JH et al. (2018) PMID:29348367", "journal": "Science (New York, N.Y.)", "date_published": "2018-02-09", "@type": ["Publication", "Item"], "status": "current", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "publications_of_exp": [{"date_published": "2018-02-09", "uuid": "84fa5633-aac7-4cb3-b53b-0f0234ea06dd", "authors": ["Gibcus JH", "Samejima K", "Goloborodko A", "Samejima I", "Naumova N", "Nuebler J", "Kanemaki MT", "Xie L", "Paulson JR", "Earnshaw WC", "Mirny LA", "Dekker J"], "title": "A pathway for mitotic chromosome formation.", "@id": "/publications/84fa5633-aac7-4cb3-b53b-0f0234ea06dd/", "abstract": "Mitotic chromosomes fold as compact arrays of chromatin loops. To identify the pathway of mitotic chromosome formation, we combined imaging and Hi-C analysis of synchronous DT40 cell cultures with polymer simulations. Here we show that in prophase, the interphase organization is rapidly lost in a condensin-dependent manner, and arrays of consecutive 60-kilobase (kb) loops are formed. During prometaphase, ~80-kb inner loops are nested within ~400-kb outer loops. The loop  array acquires a helical arrangement with consecutive loops emanating from a central \"spiral staircase\" condensin scaffold. The size of helical turns progressively increases to ~12 megabases during prometaphase. Acute depletion of  condensin I or II shows that nested loops form by differential action of the two  condensins, whereas condensin II is required for helical winding.", "@type": ["Publication", "Item"], "ID": "PMID:29348367", "display_title": "Gibcus JH et al. (2018) PMID:29348367", "short_attribution": "Gibcus JH et al. (2018)", "status": "current", "journal": "Science (New York, N.Y.)", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "experiment_categorizer": {"field": "Enzyme", "value": "HindIII", "combined": "Enzyme: HindIII"}, "experiment_summary": "Dilution Hi-C on DT40 with random integration of X. laevis Cdk1, CDK1 disruption with HindIII", "@context": "/terms/", "aggregated-items": {"badges": [{"parent": "/biosamples/4DNBSALC85HG/", "embedded_path": "biosample.badges", "item": {"messages": ["Biosample missing Cell Culture Details"], "badge": {"commendation": null, "warning": "Biosample Metadata Incomplete", "uuid": "2b2cc7ff-b7a8-4138-9a6c-22884fc71690", "@id": "/badges/biosample-metadata-incomplete/", "badge_icon": "/static/img/badges/biosample-icon.svg", "description": "Biosample is missing metadata information required as part of the standards implemented by the 4DN Samples working group."}}}]}, "validation-errors": []}