{"lab": {"uuid": "8c95312f-afa0-49ee-9d3c-e30849c74e50", "display_title": "Wei Xie, TSINGHUA", "title": "Wei Xie, TSINGHUA", "@id": "/labs/wei-xie-lab/", "@type": ["Lab", "Item"], "status": "current", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin", "role.lab_submitter", "submits_for.8c95312f-afa0-49ee-9d3c-e30849c74e50"]}}, "award": {"center": "External", "uuid": "12a92962-8265-4fc0-b2f8-cf14f05db58b", "description": "Funding source is from outside 4DN.", "name": "external-award", "status": "current", "@type": ["Award", "Item"], "project": "External", "display_title": "EXTERNAL AWARD", "@id": "/awards/external-award/", "center_title": "External", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "md5sum": "cf5f5791927e1ce4ace95b1fd1186a87", "status": "released", "accession": "4DNFIS45KZF6", "file_size": 798126651, "file_type": "contact list-replicate", "description": "This is an output file of the Hi-C processing pipeline", "extra_files": [{"href": "/files-processed/4DNFIS45KZF6/@@download/4DNFIS45KZF6.pairs.gz.px2", "uuid": "4af3cbf7-1b83-4bdb-b8c0-8222e2a7e854", "md5sum": "0ea63c611cc463c572857c20bbad1aed", "status": "released", "filename": "4DNFIS45KZF6", "accession": "4DNFIS45KZF6", "file_size": 16697978, "upload_key": "4af3cbf7-1b83-4bdb-b8c0-8222e2a7e854/4DNFIS45KZF6.pairs.gz.px2", "file_format": {"@type": ["FileFormat", "Item"], "@id": "/file-formats/pairs_px2/", "display_title": "pairs_px2", "status": "released", "uuid": "d13d06cf-218e-4f61-aaf0-91f226348b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "pairs", "@type": ["FileFormat", "Item"], "@id": "/file-formats/pairs/", "file_format": "pairs", "status": "released", "uuid": "d13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "date_created": "2020-01-24T08:01:24.993675+00:00", "submitted_by": {"error": "no view permissions"}, "last_modified": {"modified_by": {"error": "no view permissions"}, "date_modified": "2021-04-06T20:18:58.887193+00:00"}, "public_release": "2020-02-07", "quality_metric": {"Cis reads (>20kb)": 23643068, "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIS45KZF6/pairsqc_report.html", "@id": "/quality-metrics-pairsqc/7b365e91-e81f-4892-84e8-3d7b253c8cc6/", "Short cis reads (<20kb)": 16403657, "Total reads": 52568392, "@type": ["QualityMetricPairsqc", "QualityMetric", "Item"], "display_title": "QualityMetricPairsqc from 2020-01-25", "status": "released", "Trans reads": 12521667, "uuid": "7b365e91-e81f-4892-84e8-3d7b253c8cc6", "quality_metric_summary": [{"title": "Filtered Reads", "value": "52568392", "numberType": "integer"}, {"title": "Cis reads (>20kb)", "value": "44.976", "tooltip": "Percent of filtered reads (=23.64m)", "numberType": "percent"}, {"title": "Short cis reads", "value": "31.204", "tooltip": "Percent of filtered reads (=16.4m)", "numberType": "percent"}, {"title": "Trans Reads", "value": "23.82", "tooltip": "Percent of filtered reads (=12.52m)", "numberType": "percent"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "schema_version": "3", "genome_assembly": "GRCm38", "project_release": "2020-02-07", "source_experiments": ["8a4f6452-28fa-4a96-b7d1-c495acb243c1"], "file_classification": "processed file", "@id": "/files-processed/4DNFIS45KZF6/", "@type": ["FileProcessed", "File", "Item"], "uuid": "4af3cbf7-1b83-4bdb-b8c0-8222e2a7e854", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "display_title": "4DNFIS45KZF6.pairs.gz", "external_references": [], "experiments": [{"uuid": "8a4f6452-28fa-4a96-b7d1-c495acb243c1", "@type": ["ExperimentHiC", "Experiment", "Item"], "@id": "/experiments-hi-c/4DNEX2FFAUYV/", "accession": "4DNEX2FFAUYV", "display_title": "in situ Hi-C on PN5 stage zygote with MboI - 4DNEX2FFAUYV", "status": "released", "biosample": {"biosource_summary": "PN5 stage zygote", "@id": "/biosamples/4DNBSSYN5ZF6/", "treatments_summary": "None", "status": "released", "display_title": "4DNBSSYN5ZF6", "@type": ["Biosample", "Item"], "accession": "4DNBSSYN5ZF6", "uuid": "8893a697-ab9f-4575-952c-7420c744deca", "modifications_summary": "None", "biosource": [{"display_title": "PN5 stage zygote - 4DNSRAFSS6H3", "@id": "/biosources/4DNSRAFSS6H3/", "@type": ["Biosource", "Item"], "status": "released", "uuid": "7729de0a-b025-4ec1-b9a9-6ea27692bf72", "cell_line_tier": "Unclassified", "biosource_type": "primary cell", "override_biosource_name": "PN5 stage zygote", "organism": {"uuid": "3413218c-3d86-498b-a0a2-9a406638e786", "name": "mouse", "scientific_name": "Mus musculus", "display_title": "M. musculus", "status": "released", "@id": "/organisms/10090/", "@type": ["Organism", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "cell_line": {"@id": "/ontology-terms/CL:0000365/", "@type": ["OntologyTerm", "Item"], "preferred_name": "animal zygote", "status": "released", "term_name": "animal zygote", "display_title": "animal zygote", "term_id": "CL:0000365", "uuid": "083776ff-12aa-4a1e-bddd-bbd2a2c96362", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "individual": {"display_title": "4DNINNKVDPKM", "status": "released", "uuid": "15556aef-771d-4338-9ed9-6cc0be87a0ea", "@type": ["IndividualMouse", "Individual", "Item"], "@id": "/individuals-mouse/4DNINNKVDPKM/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "experiment_sets": [{"@type": ["ExperimentSetReplicate", "ExperimentSet", "Item"], "status": "released", "accession": "4DNES1J8MC4Q", "display_title": "4DNES1J8MC4Q", "@id": "/experiment-set-replicates/4DNES1J8MC4Q/", "experimentset_type": "replicate", "uuid": "3a7a6bb8-2d32-4a92-8e29-77444f88da43", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "digestion_enzyme": {"display_title": "MboI", "@type": ["Enzyme", "Item"], "status": "released", "@id": "/enzymes/MboI/", "uuid": "d8da42d0-bc20-40e5-bacf-c263b8603e03", "name": "MboI", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "experiment_type": {"display_title": "in situ Hi-C", "uuid": "a2920a38-cdba-4ff0-b4f0-c6bb53257747", "status": "released", "@type": ["ExperimentType", "Item"], "title": "in situ Hi-C", "@id": "/experiment-types/in-situ-hi-c/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "last_modified": {"date_modified": "2024-07-19T12:45:19.334336+00:00"}}], "file_type_detailed": "contact list-replicate (pairs)", "track_and_facet_info": {"experimental_lab": "Wei Xie, TSINGHUA", "experiment_type": "in situ Hi-C", "experiment_bucket": "processed file", "assay_info": "MboI", "dataset": "sisHi-C during early embryonic development", "condition": "Zygotes in pronuclear stage 5", "replicate_info": "Biorep 4, Techrep 1", "biosource_name": "PN5 stage zygote", "lab_name": "Wei Xie, TSINGHUA"}, "title": "4DNFIS45KZF6", "href": "/files-processed/4DNFIS45KZF6/@@download/4DNFIS45KZF6.pairs.gz", "upload_key": "4af3cbf7-1b83-4bdb-b8c0-8222e2a7e854/4DNFIS45KZF6.pairs.gz", "open_data_url": "https://4dn-open-data-public.s3.amazonaws.com/fourfront-webprod/wfoutput/4af3cbf7-1b83-4bdb-b8c0-8222e2a7e854/4DNFIS45KZF6.pairs.gz", "tsv_notes": "", "workflow_run_inputs": [{"status": "released", "display_title": "pairsqc-single 0.2.6 run 2020-01-25 00:00:55.475388", "@type": ["WorkflowRunAwsem", "WorkflowRun", "Item"], "uuid": "a9d4c38e-883d-4ede-b4e4-c921000d3793", "@id": "/workflow-runs-awsem/a9d4c38e-883d-4ede-b4e4-c921000d3793/", "output_files": [{"workflow_argument_name": "report", "value_qc": {"overall_quality_status": "PASS", "@id": "/quality-metrics-pairsqc/7b365e91-e81f-4892-84e8-3d7b253c8cc6/", "status": "released", "uuid": "7b365e91-e81f-4892-84e8-3d7b253c8cc6", "display_title": "QualityMetricPairsqc from 2020-01-25", "@type": ["QualityMetricPairsqc", "QualityMetric", "Item"], "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIS45KZF6/pairsqc_report.html", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "input_files": [{"workflow_argument_name": "chromsizes", "value": {"display_title": "4DNFI3UBJ3HZ.chrom.sizes", "filename": "mm10.mainonly.chrom.sizes", "status": "released", "accession": "4DNFI3UBJ3HZ", "uuid": "bd0784a5-2a3d-42f0-ba9c-d9b3dc0539c6", "@id": "/files-reference/4DNFI3UBJ3HZ/", "@type": ["FileReference", "File", "Item"], "file_format": {"@type": ["FileFormat", "Item"], "@id": "/file-formats/chromsizes/", "status": "released", "file_format": "chromsizes", "uuid": "d13d06cf-218e-4f61-55f0-93f226248b2c", "display_title": "chromsizes", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}, {"workflow_argument_name": "input_pairs", "value": {"display_title": "4DNFIS45KZF6.pairs.gz", "status": "released", "accession": "4DNFIS45KZF6", "uuid": "4af3cbf7-1b83-4bdb-b8c0-8222e2a7e854", "@id": "/files-processed/4DNFIS45KZF6/", "@type": ["FileProcessed", "File", "Item"], "file_format": {"@type": ["FileFormat", "Item"], "@id": "/file-formats/pairs/", "status": "released", "file_format": "pairs", "uuid": "d13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "pairs", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "workflow": {"@type": ["Workflow", "Item"], "status": "released", "display_title": "PairsQC 0.2.6 - 4DNWFHB26CID", "title": "PairsQC 0.2.6", "@id": "/workflows/4DNWFHB26CID/", "uuid": "b8c533e0-f8c0-4510-b4a1-ac35158e27c3", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"status": "released", "display_title": "hi-c-processing-pairs 0.2.7 run 2020-01-25 03:01:22.806456", "@type": ["WorkflowRunAwsem", "WorkflowRun", "Item"], "uuid": "f9b344c7-3149-4345-a5dc-2d162334af1e", "@id": "/workflow-runs-awsem/f9b344c7-3149-4345-a5dc-2d162334af1e/", "output_files": [{"workflow_argument_name": "merged_pairs", "value": {"@id": "/files-processed/4DNFIZ59RT2J/", "uuid": "a5b723f3-5999-4edd-a2a7-1242ea45fae4", "status": "released", "@type": ["FileProcessed", "File", "Item"], "accession": "4DNFIZ59RT2J", "display_title": "4DNFIZ59RT2J.pairs.gz", "file_format": {"file_format": "pairs", "status": "released", "@type": ["FileFormat", "Item"], "display_title": "pairs", "@id": "/file-formats/pairs/", "uuid": "d13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}, {"workflow_argument_name": "hic", "value": {"@id": "/files-processed/4DNFI1EYIGOC/", "uuid": "1181c0c4-afb7-4b6a-9fdc-d868fb2253fc", "status": "released", "@type": ["FileProcessed", "File", "Item"], "accession": "4DNFI1EYIGOC", "display_title": "4DNFI1EYIGOC.hic", "file_format": {"file_format": "hic", "status": "released", "@type": ["FileFormat", "Item"], "display_title": "hic", "@id": "/file-formats/hic/", "uuid": "d13d11cf-218e-4f61-bbf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}, {"workflow_argument_name": "mcool", "value": {"@id": "/files-processed/4DNFIDFYUWC3/", "uuid": "320a0ff5-c23d-4b30-ba82-bb2cf8fdf9c2", "status": "released", "@type": ["FileProcessed", "File", "Item"], "accession": "4DNFIDFYUWC3", "display_title": "4DNFIDFYUWC3.mcool", "file_format": {"file_format": "mcool", "status": "released", "@type": ["FileFormat", "Item"], "display_title": "mcool", "@id": "/file-formats/mcool/", "uuid": "d13d06cf-218e-4f61-ccf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "input_files": [{"workflow_argument_name": "chromsizes", "value": {"display_title": "4DNFI3UBJ3HZ.chrom.sizes", "filename": "mm10.mainonly.chrom.sizes", "status": "released", "accession": "4DNFI3UBJ3HZ", "uuid": "bd0784a5-2a3d-42f0-ba9c-d9b3dc0539c6", "@id": "/files-reference/4DNFI3UBJ3HZ/", "@type": ["FileReference", "File", "Item"], "file_format": {"@type": ["FileFormat", "Item"], "@id": "/file-formats/chromsizes/", "status": "released", "file_format": "chromsizes", "uuid": "d13d06cf-218e-4f61-55f0-93f226248b2c", "display_title": "chromsizes", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}, {"workflow_argument_name": "input_pairs", "value": {"display_title": "4DNFI3JD3XNX.pairs.gz", "status": "released", "accession": "4DNFI3JD3XNX", "uuid": "580703fb-8935-4b0b-8a48-f0831f1f5de1", "@id": "/files-processed/4DNFI3JD3XNX/", "@type": ["FileProcessed", "File", "Item"], "file_format": {"@type": ["FileFormat", "Item"], "@id": "/file-formats/pairs/", "status": "released", "file_format": "pairs", "uuid": "d13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "pairs", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}, {"workflow_argument_name": "input_pairs", "value": {"display_title": "4DNFI4T1IM11.pairs.gz", "status": "released", "accession": "4DNFI4T1IM11", "uuid": "dac8c84a-f9f1-4d5d-bb07-39de9a85200e", "@id": "/files-processed/4DNFI4T1IM11/", "@type": ["FileProcessed", "File", "Item"], "file_format": {"@type": ["FileFormat", "Item"], "@id": "/file-formats/pairs/", "status": "released", "file_format": "pairs", "uuid": "d13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "pairs", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}, {"workflow_argument_name": "input_pairs", "value": {"display_title": "4DNFITQXLWSM.pairs.gz", "status": "released", "accession": "4DNFITQXLWSM", "uuid": "344a8411-5639-48a0-bf59-65367d6ed4f1", "@id": "/files-processed/4DNFITQXLWSM/", "@type": ["FileProcessed", "File", "Item"], "file_format": {"@type": ["FileFormat", "Item"], "@id": "/file-formats/pairs/", "status": "released", "file_format": "pairs", "uuid": "d13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "pairs", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}, {"workflow_argument_name": "input_pairs", "value": {"display_title": "4DNFIS45KZF6.pairs.gz", "status": "released", "accession": "4DNFIS45KZF6", "uuid": "4af3cbf7-1b83-4bdb-b8c0-8222e2a7e854", "@id": "/files-processed/4DNFIS45KZF6/", "@type": ["FileProcessed", "File", "Item"], "file_format": {"@type": ["FileFormat", "Item"], "@id": "/file-formats/pairs/", "status": "released", "file_format": "pairs", "uuid": "d13d06cf-218e-4f61-aaf0-91f226248b2c", "display_title": "pairs", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}, {"workflow_argument_name": "restriction_file", "value": {"display_title": "4DNFIONK4G14.txt", "filename": "mm10_MboI.txt", "status": "released", "accession": "4DNFIONK4G14", "uuid": "cb3c293b-b5fe-4f47-9373-a29399ea1edc", "@id": "/files-reference/4DNFIONK4G14/", "@type": ["FileReference", "File", "Item"], "file_format": {"@type": ["FileFormat", "Item"], "@id": "/file-formats/juicer_format_restriction_site_file/", "status": "released", "file_format": "juicer_format_restriction_site_file", "uuid": "d13d06cf-218e-4f61-55f0-94f226248b2c", "display_title": "juicer_format_restriction_site_file", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "workflow": {"@type": ["Workflow", "Item"], "status": "released", "display_title": "Generation of multiresolution Hi-C contact matrices from a set of contact lists 0.2.7 - 4DNWF2YBHXQM", "title": "Generation of multiresolution Hi-C contact matrices from a set of contact lists 0.2.7", "@id": "/workflows/4DNWF2YBHXQM/", "uuid": "23bd6d73-4190-496d-837c-21bcdb3802ed", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "workflow_run_outputs": [{"@id": "/workflow-runs-awsem/a9346c9a-f124-4318-9a04-c6928a379a94/", "@type": ["WorkflowRunAwsem", "WorkflowRun", "Item"], "uuid": "a9346c9a-f124-4318-9a04-c6928a379a94", "display_title": "hi-c-processing-bam 0.2.6 run 2020-01-24 08:01:26.319425", "status": "released", "output_files": [{"workflow_argument_name": "annotated_bam", "value": {"@id": "/files-processed/4DNFIQXWNQ1T/", "accession": "4DNFIQXWNQ1T", "@type": ["FileProcessed", "File", "Item"], "status": "released", "uuid": "51ef2d34-7827-43cf-ba37-6c3501856cba", "display_title": "4DNFIQXWNQ1T.bam", "file_format": {"display_title": "bam", "file_format": "bam", "@type": ["FileFormat", "Item"], "@id": "/file-formats/bam/", "uuid": "d13d06cf-218e-4f61-aaf0-91f226248b3c", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}, {"workflow_argument_name": "filtered_pairs", "value": {"@id": "/files-processed/4DNFIS45KZF6/", "accession": "4DNFIS45KZF6", "@type": ["FileProcessed", "File", "Item"], "status": "released", "uuid": "4af3cbf7-1b83-4bdb-b8c0-8222e2a7e854", "display_title": "4DNFIS45KZF6.pairs.gz", "file_format": {"display_title": "pairs", "file_format": "pairs", "@type": ["FileFormat", "Item"], "@id": "/file-formats/pairs/", "uuid": "d13d06cf-218e-4f61-aaf0-91f226248b2c", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "input_files": [{"workflow_argument_name": "chromsize", "value": {"filename": "mm10.mainonly.chrom.sizes", "display_title": "4DNFI3UBJ3HZ.chrom.sizes", "@type": ["FileReference", "File", "Item"], "@id": "/files-reference/4DNFI3UBJ3HZ/", "status": "released", "uuid": "bd0784a5-2a3d-42f0-ba9c-d9b3dc0539c6", "accession": "4DNFI3UBJ3HZ", "file_format": {"file_format": "chromsizes", "display_title": "chromsizes", "@type": ["FileFormat", "Item"], "status": "released", "uuid": "d13d06cf-218e-4f61-55f0-93f226248b2c", "@id": "/file-formats/chromsizes/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}, {"workflow_argument_name": "input_bams", "value": {"display_title": "4DNFIC4C8ONN.bam", "@type": ["FileProcessed", "File", "Item"], "@id": "/files-processed/4DNFIC4C8ONN/", "status": "released", "uuid": "91589342-053c-4faa-855e-da32063e9be6", "accession": "4DNFIC4C8ONN", "file_format": {"file_format": "bam", "display_title": "bam", "@type": ["FileFormat", "Item"], "status": "released", "uuid": "d13d06cf-218e-4f61-aaf0-91f226248b3c", "@id": "/file-formats/bam/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "workflow": {"title": "Hi-C Post-alignment Processing 0.2.6", "uuid": "023bfb3e-9a8b-42b9-a9d4-216079526f68", "@type": ["Workflow", "Item"], "status": "released", "@id": "/workflows/4DNWFT69RBY4/", "display_title": "Hi-C Post-alignment Processing 0.2.6 - 4DNWFT69RBY4", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "experiment_sets": [], "pairsqc_table": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIS45KZF6/4DNFIS45KZF6.plot_table.out", "source_experiment_sets": [{"@type": ["ExperimentSetReplicate", "ExperimentSet", "Item"], "status": "released", "uuid": "3a7a6bb8-2d32-4a92-8e29-77444f88da43", "@id": "/experiment-set-replicates/4DNES1J8MC4Q/", "display_title": "4DNES1J8MC4Q", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "@context": "/terms/", "aggregated-items": {"last_modified": [{"parent": "/experiments-hi-c/4DNEX2FFAUYV/", "embedded_path": "experiments.last_modified", "item": {"date_modified": "2024-07-19T12:45:19.334336+00:00"}}, {"parent": "/files-processed/4DNFIS45KZF6/", "embedded_path": "last_modified", "item": {"date_modified": "2021-04-06T20:18:58.887193+00:00"}}]}, "validation-errors": []}