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6 fewer sets in 4DN-only Data.

Included Properties

Data Type
  • ExperimentSetReplicate6
  • Experiment Set6
    • Sample Category
  • In vitro Differentiation6
  • WTC-116
    • Sample
  • WTC-11 differentiated to cardiac muscle myoblast3
  • WTC-11 differentiated to primitive cardiac myocyte3
    • Organ/System
  • mesoderm6
  • circulatory system3
  • heart3
  • musculature of body3
    • Tissue Source
  • cardiac muscle myoblast3
  • primitive cardiac myocyte3
    • Modifications
    Set Type
  • Replicate6
    • Dataset Group
  • Ren lab TBX5allelic series6
    • 15 Common Properties
     Project
    CvDC
     Lab
    Bing Ren, UCSD
     Experiment Category
    Sequencing
     Experiment Type
    Hi-C
     Dataset
    in situ Hi-C on an allelic series of iPSCs differentiated to cardiac cells
     Organism
    Human
     Sample Type
    in vitro differentiated cells
     Sample Tier
    Unclassified
     Publication
    No value
     Treatments
    No value
     Assay Details
    Enzyme: MboI
     Center
    5UM1HL128773-04
     Status
    Released
     Commendations
    No value
     Warnings
    Biosample Metadata Incomplete
    Title
    Experiment Type
    Biosample
    Dataset
    Condition
    Assay Details
    Lab
    4DNESYEY3SHT
    in situ Hi-C
    WTC-11 differentiated to primitive cardiac myocyte
    in situ Hi-C on an allelic series of iPSCs differentiated to cardiac cells
    TBX5 homozygous (compound heterozygous) WTC-11-derived cardiac myocytes - differentiation day 11
    Enzyme
    MboI
    Bing Ren, UCSD
    4DNESQDM1ZJH
    in situ Hi-C
    WTC-11 differentiated to cardiac muscle myoblast
    in situ Hi-C on an allelic series of iPSCs differentiated to cardiac cells
    TBX5 homozygous (compound heterozygous) WTC-11-derived cardiac precursors - differentiation day 6
    Enzyme
    MboI
    Bing Ren, UCSD
    4DNESAIFV6CN
    in situ Hi-C
    WTC-11 differentiated to primitive cardiac myocyte
    in situ Hi-C on an allelic series of iPSCs differentiated to cardiac cells
    TBX5 heterozygous WTC-11-derived cardiac myocytes - differentiation day 11
    Enzyme
    MboI
    Bing Ren, UCSD
    4DNESGOHU121
    in situ Hi-C
    WTC-11 differentiated to cardiac muscle myoblast
    in situ Hi-C on an allelic series of iPSCs differentiated to cardiac cells
    TBX5 heterozygous WTC-11-derived cardiac precursors - differentiation day 6
    Enzyme
    MboI
    Bing Ren, UCSD
    4DNESREEJFEH
    in situ Hi-C
    WTC-11 differentiated to primitive cardiac myocyte
    in situ Hi-C on an allelic series of iPSCs differentiated to cardiac cells
    Crispr treated, unmodified control WTC-11-derived cardiac myocytes - differentiation day 11
    Enzyme
    MboI
    Bing Ren, UCSD
    4DNESWL6EBND
    in situ Hi-C
    WTC-11 differentiated to cardiac muscle myoblast
    in situ Hi-C on an allelic series of iPSCs differentiated to cardiac cells
    Crispr treated, unmodified control WTC-11-derived cardiac precursors - differentiation day 6
    Enzyme
    MboI
    Bing Ren, UCSD
    - fin -